Os07g0179500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0179500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.7 | 0.381 | 9.64 | 0.597 | 1.65 | -1.22 | -0.608 | -0.493 | 0.52 | 23.4 | 22.89 | 407 | -- | -- |
| 65.95 | 0.378 | 9.64 | 0.552 | 1.64 | -1.11 | -0.574 | -- | 0.514 | 23.4 | 22.98 | 423 | -- | -- |
| 67.29 | 0.382 | 9.64 | 0.615 | 1.65 | -1.21 | -- | -0.433 | 0.519 | 23.4 | 22.9 | 404 | -- | -- |
| 67.41 | 0.382 | 9.64 | 0.562 | 1.62 | -1.12 | -- | -- | 0.511 | 23.4 | 22.91 | 465 | -- | -- |
| 198.37 | 0.656 | 9.67 | 0.2 | -- | -1.82 | -- | 0.657 | 0.277 | -- | 27.91 | 826 | -- | -- |
| 80.52 | 0.421 | 9.61 | 0.805 | 1.67 | -- | -0.592 | -- | 0.673 | 23.2 | -- | -- | -- | -- |
| 82.02 | 0.424 | 9.61 | 0.829 | 1.67 | -- | -- | -- | 0.675 | 23.2 | -- | -- | -- | -- |
| 198.57 | 0.656 | 9.66 | 0.323 | -- | -1.86 | -- | -- | 0.276 | -- | 27.6 | 825 | -- | -- |
| 73.47 | 0.399 | 9.67 | -- | 1.66 | -1.52 | -- | -- | 0.417 | 23.1 | 22.3 | 1404 | -- | -- |
| 256.37 | 0.748 | 9.57 | 0.87 | -- | -- | -- | -- | 0.69 | -- | -- | -- | -- | -- |
| 100.15 | 0.468 | 9.63 | -- | 1.68 | -- | -- | -- | 0.583 | 23.2 | -- | -- | -- | -- |
| 201.1 | 0.66 | 9.66 | -- | -- | -2.01 | -- | -- | 0.232 | -- | 27.54 | 824 | -- | -- |
| 276.32 | 0.776 | 9.59 | -- | -- | -- | -- | -- | 0.593 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.52 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 2 | 60.58 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 5 | 62.27 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 6 | 62.32 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 10 | 62.40 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 12 | 62.58 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 14 | 62.64 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 28 | 63.20 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 36 | 63.32 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 44 | 63.46 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 45 | 63.47 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 65 | 63.72 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 71 | 63.78 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 84 | 63.91 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 86 | 63.93 | wind | 1.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 106 | 64.07 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 124 | 64.23 | wind | 1.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 130 | 64.29 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 140 | 64.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 142 | 64.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 144 | 64.38 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 145 | 64.38 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 150 | 64.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 12 |
| 161 | 64.46 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 168 | 64.52 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 179 | 64.59 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 185 | 64.60 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 214 | 64.73 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 229 | 64.79 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 233 | 64.80 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 235 | 64.80 | wind | 1.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 244 | 64.86 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 250 | 64.87 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 263 | 64.92 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 290 | 65.03 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 322 | 65.14 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 325 | 65.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 335 | 65.18 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 396 | 65.34 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 398 | 65.34 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 423 | 65.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 426 | 65.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 428 | 65.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 435 | 65.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 437 | 65.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 464 | 65.53 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 468 | 65.54 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 474 | 65.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 477 | 65.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 488 | 65.59 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 489 | 65.59 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 504 | 65.64 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 507 | 65.64 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 535 | 65.71 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 559 | 65.79 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 561 | 65.80 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 580 | 65.84 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 619 | 65.90 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 622 | 65.90 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 623 | 65.91 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 639 | 65.93 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 672 | 65.99 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 681 | 66.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 745 | 66.12 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 748 | 66.12 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 760 | 66.14 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 770 | 66.17 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 820 | 66.26 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 822 | 66.26 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 827 | 66.26 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 860 | 66.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 901 | 66.36 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 903 | 66.36 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 912 | 66.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 916 | 66.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 930 | 66.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 936 | 66.42 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 988 | 66.49 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |