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Os07g0164600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : SOH1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0134) R2 : 0.074
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.17 (0.0281) R2dN8 : 0.0956 R2N8 : 0.074
σ : 0.252
deviance : 29.1
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.92 0.23 11.4 -0.248 0.207 0.436 -0.414 -1.3 0.0447 10.5 21.13 617 -- --
24.92 0.232 11.4 0.0263 0.191 0.33 -0.243 -- 0.127 11 21.1 604 -- --
24.46 0.23 11.4 -0.193 0.172 0.426 -- -1.11 0.0626 9.86 21.92 437 -- --
25.18 0.234 11.4 0.0187 0.194 0.328 -- -- 0.126 11.1 21.17 616 -- --
25.32 0.234 11.4 -0.177 -- 0.404 -- -1.2 0.0747 -- 22.1 177 -- --
27.07 0.244 11.4 0.107 0.159 -- -0.239 -- 0.185 13.3 -- -- -- --
27.29 0.245 11.4 0.0987 0.161 -- -- -- 0.184 13.6 -- -- -- --
26.06 0.238 11.4 0.00656 -- 0.415 -- -- 0.124 -- 15.77 94 -- --
25.19 0.234 11.4 -- 0.195 0.333 -- -- 0.123 11.1 21.1 616 -- --
28.88 0.251 11.4 0.0923 -- -- -- -- 0.18 -- -- -- -- --
27.55 0.246 11.4 -- 0.159 -- -- -- 0.173 13.6 -- -- -- --
26.04 0.238 11.4 -- -- 0.446 -- -- 0.12 -- 13.93 94 -- --
29.1 0.252 11.4 -- -- -- -- -- 0.17 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.24 radiation 1 14400 < th dose dependent rect. 3 2
5 23.38 radiation 1 14400 > th dose independent rect. 18 1
15 23.47 radiation 1 14400 < th dose independent rect. 18 7
17 23.47 radiation 1 14400 < th dose independent rect. 18 10
18 23.48 radiation 1 14400 < th dose independent rect. 18 1
28 23.61 radiation 1 14400 < th dose dependent rect. 18 1
36 23.61 temperature 20 720 > th dose dependent rect. 1 17
38 23.62 radiation 1 14400 < th dose dependent rect. 21 8
51 23.68 temperature 10 90 > th dose dependent sin 16 NA
59 23.71 temperature 20 720 > th dose dependent rect. 6 12
78 23.77 temperature 20 720 > th dose dependent sin 1 NA
91 23.80 temperature 20 1440 > th dose dependent rect. 20 1
112 23.87 wind 3 43200 < th dose independent rect. 20 1
113 23.87 temperature 30 30 < th dose dependent sin 16 NA
116 23.88 wind 3 43200 > th dose independent rect. 20 1
118 23.88 temperature 25 270 > th dose dependent sin 19 NA
124 23.89 temperature 25 90 > th dose dependent sin 17 NA
127 23.89 humidity 90 14400 > th dose dependent rect. 24 1
128 23.89 humidity 90 43200 > th dose dependent rect. 13 2
150 23.91 temperature 25 270 > th dose dependent rect. 9 12
187 23.93 temperature 25 270 > th dose dependent rect. 12 23
190 23.94 wind 3 43200 < th dose dependent rect. 20 2
234 23.97 humidity 90 14400 > th dose dependent rect. 22 5
240 23.98 wind 5 43200 > th dose independent rect. 14 2
263 23.98 temperature 15 270 > th dose dependent rect. 12 14
266 23.98 temperature 15 30 > th dose dependent rect. 12 17
269 23.99 wind 3 43200 < th dose independent rect. 19 3
272 23.99 wind 1 43200 > th dose dependent rect. 10 6
289 24.00 wind 1 43200 > th dose dependent rect. 11 4
290 24.00 wind 7 43200 < th dose dependent rect. 11 4
302 24.00 temperature 20 720 > th dose dependent rect. 6 22
305 24.01 wind 5 43200 < th dose independent rect. 13 3
307 24.01 wind 5 43200 < th dose independent rect. 11 6
314 24.01 wind 3 43200 < th dose dependent rect. 11 1
315 24.01 wind 9 43200 < th dose dependent rect. 10 6
343 24.02 temperature 25 270 > th dose dependent rect. 9 18
352 24.02 temperature 20 720 > th dose dependent rect. 14 23
356 24.03 wind 5 43200 > th dose independent rect. 11 6
368 24.03 temperature 30 30 < th dose dependent rect. 15 10
375 24.03 temperature 10 720 > th dose dependent rect. 6 16
394 24.03 temperature 20 720 > th dose dependent rect. 16 23
397 24.04 temperature 20 720 > th dose dependent no NA NA
423 24.05 temperature 30 1440 < th dose dependent rect. 20 1
428 24.05 temperature 10 720 > th dose dependent rect. 10 8
446 24.05 temperature 25 270 > th dose dependent rect. 10 23
490 24.08 wind 3 43200 > th dose independent rect. 19 3
512 24.09 radiation 10 720 < th dose independent rect. 17 8
518 24.09 temperature 10 1440 > th dose dependent rect. 20 1
523 24.09 wind 9 43200 > th dose dependent rect. 10 5
621 24.12 wind 9 43200 > th dose independent rect. 18 21
624 24.12 wind 9 43200 < th dose dependent rect. 13 1
656 24.13 wind 3 43200 < th dose dependent rect. 9 3
680 24.14 radiation 30 4320 < th dose independent rect. 16 16
759 24.16 wind 9 43200 < th dose independent rect. 18 21
770 24.16 wind 9 43200 > th dose dependent rect. 18 7
865 24.18 wind 7 43200 > th dose dependent rect. 5 10
906 24.19 wind 9 43200 > th dose dependent rect. 18 3
933 24.20 wind 9 43200 > th dose independent rect. 18 3
937 24.20 wind 3 43200 > th dose dependent sin 21 NA
949 24.20 wind 7 43200 > th dose dependent rect. 7 8
973 24.21 temperature 30 270 > th dose independent sin 16 NA
974 24.21 humidity 90 43200 > th dose independent rect. 13 2
982 24.21 radiation 1 14400 < th dose dependent sin 14 NA