Os07g0155100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAD dependent oxidoreductase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0155100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : FAD dependent oxidoreductase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.43 | 0.551 | 9.3 | -0.388 | 0.815 | 1.96 | -1.46 | 2.21 | -0.295 | 15.5 | 6.855 | 133 | -- | -- |
| 140.2 | 0.551 | 9.33 | -0.652 | 0.828 | 1.83 | -1.21 | -- | -0.359 | 15.7 | 16.41 | 113 | -- | -- |
| 142.4 | 0.556 | 9.31 | -0.565 | 0.818 | 1.94 | -- | 1.33 | -0.343 | 15 | 14.27 | 236 | -- | -- |
| 142.26 | 0.556 | 9.34 | -0.687 | 0.838 | 1.72 | -- | -- | -0.374 | 15.7 | 16.79 | 122 | -- | -- |
| 166.61 | 0.601 | 9.35 | -0.818 | -- | 2.3 | -- | -0.813 | -0.492 | -- | 20.59 | 134 | -- | -- |
| 178.07 | 0.626 | 9.28 | -0.307 | 1.39 | -- | -0.569 | -- | -0.109 | 15.6 | -- | -- | -- | -- |
| 179.06 | 0.627 | 9.28 | -0.316 | 1.39 | -- | -- | -- | -0.113 | 15.6 | -- | -- | -- | -- |
| 165.75 | 0.6 | 9.36 | -0.829 | -- | 2.22 | -- | -- | -0.506 | -- | 20.51 | 114 | -- | -- |
| 154.59 | 0.579 | 9.31 | -- | 0.985 | 1.52 | -- | -- | -0.257 | 15.2 | 13.98 | 256 | -- | -- |
| 286.49 | 0.791 | 9.28 | -0.374 | -- | -- | -- | -- | -0.15 | -- | -- | -- | -- | -- |
| 181.69 | 0.631 | 9.28 | -- | 1.4 | -- | -- | -- | -0.0775 | 15.6 | -- | -- | -- | -- |
| 182.98 | 0.63 | 9.34 | -- | -- | 2.03 | -- | -- | -0.381 | -- | 21.13 | 114 | -- | -- |
| 290.18 | 0.795 | 9.27 | -- | -- | -- | -- | -- | -0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.44 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 3 | 131.70 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 4 | 131.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 15 | 133.44 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 8 |
| 16 | 133.50 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 18 | 133.63 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 21 | 133.81 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 27 | 134.25 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 7 |
| 31 | 134.47 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 10 |
| 39 | 134.68 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 43 | 134.79 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 13 |
| 47 | 134.84 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 59 | 135.10 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 60 | 135.12 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 69 | 135.27 | temperature | 30 | 4320 | < th | dose independent | rect. | 1 | 11 |
| 70 | 135.28 | temperature | 30 | 4320 | < th | dose independent | rect. | 4 | 8 |
| 82 | 135.34 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 16 |
| 94 | 135.50 | temperature | 30 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 136 | 135.82 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 147 | 135.99 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 160 | 136.19 | temperature | 25 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 167 | 136.26 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 3 |
| 234 | 136.54 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 19 |
| 240 | 136.60 | temperature | 25 | 4320 | > th | dose independent | sin | 11 | NA |
| 272 | 136.76 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 318 | 137.00 | temperature | 30 | 4320 | < th | dose independent | sin | 8 | NA |
| 342 | 137.04 | temperature | 30 | 4320 | > th | dose independent | sin | 8 | NA |
| 352 | 137.07 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 22 |
| 360 | 137.12 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 362 | 137.13 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 445 | 137.29 | temperature | 25 | 4320 | > th | dose dependent | sin | 10 | NA |
| 482 | 137.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 483 | 137.47 | temperature | 25 | 4320 | < th | dose independent | sin | 11 | NA |
| 513 | 137.66 | temperature | 30 | 4320 | > th | dose dependent | sin | 7 | NA |
| 581 | 137.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 586 | 138.00 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 647 | 138.26 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 660 | 138.35 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 674 | 138.39 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 703 | 138.43 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 729 | 138.47 | temperature | 30 | 4320 | < th | dose independent | rect. | 9 | 9 |
| 747 | 138.55 | temperature | 30 | 4320 | > th | dose independent | rect. | 9 | 9 |
| 749 | 138.56 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 760 | 138.60 | temperature | 30 | 4320 | < th | dose independent | rect. | 5 | 13 |
| 771 | 138.61 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 22 |
| 773 | 138.61 | radiation | 20 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 845 | 138.71 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 9 |
| 865 | 138.72 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 7 |
| 896 | 138.77 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 15 |
| 974 | 138.92 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 978 | 138.92 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |