BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0155100 Os07g0155100|AK105193
         (391 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G67290.1  | chr5:26848419-26849755 REVERSE LENGTH=407          316   1e-86

>AT5G67290.1 | chr5:26848419-26849755 REVERSE LENGTH=407
          Length = 406

 Score =  316 bits (810), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 181/368 (49%), Positives = 219/368 (59%), Gaps = 19/368 (5%)

Query: 24  CTAYFLSTHAASPTVPTLVEKSSPACAASGKAGGFLALDWCDKTPXXXXXXXXXXXXXXX 83
           CTAYFL   A      TLVEKS+ ACAASGKAGGFLA DWCD +P               
Sbjct: 53  CTAYFL---AKKGIAVTLVEKSAVACAASGKAGGFLAFDWCDGSPVAHLARASFKLHRSL 109

Query: 84  XXXTLDGGSAYGFRPVHTLSICXXXXXXXXXXXXXXXXXXXXXWVD-PAASAAPPRELGT 142
               L+G  +YG+R + TLS+                      WV+ PA S +      T
Sbjct: 110 AEE-LNGVESYGYRALTTLSV------TVTESKPGSGGLGLPDWVNGPAKSTSTIG---T 159

Query: 143 TDTTAQVHPGFFTKAVLAAS----GAEVVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 198
           T TTAQVHP  FT+ +L+ +    G EVVI                              
Sbjct: 160 TQTTAQVHPQLFTRKLLSTAREKYGVEVVIGKLEEVRVESGRVNSVVLEGGRVIDTDVVV 219

Query: 199 XXXXPWSGRFEMVREVFDVSGLKAHSIVLRPREPENITPHALFLSYQPEPGAKMLDPEVY 258
               PWS +FE++  +F V   KAHSIVL P+EP  ITPHALFL+Y+P  G + LDPEVY
Sbjct: 220 LAMGPWSSKFELLSSIFRVYCTKAHSIVLEPKEPNAITPHALFLTYRPAHGGEALDPEVY 279

Query: 259 PRPTGEVYICGMTKDEEVPDDPETITGEPDSIAMLHKIAGRVSGQLKREEGAEVVAEQAC 318
           PRPTGEVYICGM+  EEVPDD + +T  P+SI +L ++A  VS  L  EE A V AEQAC
Sbjct: 280 PRPTGEVYICGMSSQEEVPDDADQVTSNPESIQVLKRVAKTVSSYLN-EENALVKAEQAC 338

Query: 319 YLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPATGAALAELILDGDAKIVDLAPFS 378
           +LP T+DG+PVIGE+PG+KGCYV TGHSCWGILN PATGAALAELI+DG A  VDL+ FS
Sbjct: 339 FLPSTEDGVPVIGEIPGIKGCYVGTGHSCWGILNGPATGAALAELIVDGVATSVDLSRFS 398

Query: 379 PARFLKKK 386
           P+RF K++
Sbjct: 399 PSRFSKRR 406



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.134    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,097,802
Number of extensions: 269407
Number of successful extensions: 468
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 464
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 290
Effective length of database: 8,337,553
Effective search space: 2417890370
Effective search space used: 2417890370
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)