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Os07g0152800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0102) R2 : 0.678
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.737 (0.0241) R2dC : 0.659 R2C : 0.655
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.109 (0.0213) R2dN8 : 0.0236 R2N8 : 0.0193
σ : 0.191
deviance : 16.73
__
_____
C
peak time of C : 0.00561
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.96 0.169 12.7 -0.0165 0.606 -0.579 -0.353 -0.687 0.162 23.4 9.833 12 -- --
13.27 0.17 12.7 0.0846 0.609 -0.591 -0.204 -- 0.189 23.4 9.398 18 -- --
13.37 0.17 12.7 0.0507 0.611 -0.583 -- -0.305 0.178 23.4 9.234 18 -- --
13.44 0.171 12.7 0.0918 0.609 -0.587 -- -- 0.189 23.4 6.027 12 -- --
31.57 0.263 12.6 0.193 -- -0.982 -- -0.00426 0.268 -- 18.14 7 -- --
16.6 0.191 12.7 -0.03 0.736 -- -0.168 -- 0.105 0.0131 -- -- -- --
16.72 0.191 12.7 -0.0233 0.737 -- -- -- 0.106 0.0074 -- -- -- --
31.57 0.263 12.6 0.194 -- -0.983 -- -- 0.269 -- 18.13 6 -- --
13.63 0.173 12.7 -- 0.616 -0.546 -- -- 0.173 23.5 8.06 10 -- --
50.93 0.333 12.7 -0.000387 -- -- -- -- 0.116 -- -- -- -- --
16.73 0.191 12.7 -- 0.737 -- -- -- 0.109 0.00561 -- -- -- --
32.34 0.265 12.7 -- -- -0.874 -- -- 0.239 -- 20.4 2 -- --
50.93 0.333 12.7 -- -- -- -- -- 0.116 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.24 temperature 10 10 > th dose dependent rect. 23 23
7 12.66 temperature 30 10 < th dose dependent sin 19 NA
14 12.88 temperature 20 10 > th dose dependent rect. 3 23
19 12.91 temperature 30 10 < th dose dependent rect. 9 23
21 12.94 temperature 30 10 < th dose dependent rect. 11 23
23 12.95 temperature 30 10 < th dose dependent rect. 15 23
24 12.96 temperature 10 10 > th dose dependent no NA NA
27 12.96 temperature 30 10 < th dose dependent rect. 17 23
28 12.97 temperature 30 10 < th dose dependent no NA NA
30 12.98 temperature 30 10 < th dose dependent rect. 7 23
31 12.98 temperature 30 30 < th dose dependent rect. 13 23
50 13.04 temperature 30 10 < th dose dependent rect. 2 23
52 13.05 temperature 30 10 < th dose dependent rect. 21 23
54 13.07 temperature 20 10 > th dose dependent rect. 8 23
55 13.07 temperature 30 30 < th dose dependent rect. 5 23
56 13.08 humidity 70 10 > th dose independent sin 17 NA
57 13.08 humidity 60 10 > th dose dependent sin 19 NA
64 13.11 temperature 30 720 < th dose independent rect. 11 8
71 13.13 temperature 30 720 < th dose independent rect. 14 6
74 13.14 temperature 30 720 < th dose independent rect. 14 14
75 13.14 temperature 20 10 > th dose dependent sin 18 NA
94 13.17 temperature 20 90 > th dose dependent rect. 11 23
101 13.19 temperature 30 720 < th dose independent sin 19 NA
110 13.21 temperature 30 720 < th dose independent rect. 11 16
123 13.22 temperature 20 10 > th dose dependent rect. 21 23
134 13.24 temperature 10 10 > th dose dependent sin 18 NA
144 13.25 temperature 30 720 < th dose independent rect. 24 19
151 13.26 humidity 90 10 < th dose dependent rect. 12 10
159 13.27 temperature 30 720 < th dose independent rect. 7 12
162 13.27 temperature 30 720 < th dose independent rect. 15 19
165 13.27 temperature 20 10 > th dose dependent rect. 12 23
166 13.27 temperature 20 90 > th dose dependent rect. 20 23
169 13.27 humidity 80 10 < th dose dependent rect. 12 23
170 13.28 temperature 30 720 < th dose independent sin 17 NA
172 13.28 temperature 30 720 > th dose independent rect. 14 4
175 13.28 temperature 30 720 > th dose independent rect. 12 7
206 13.28 temperature 20 10 > th dose dependent rect. 3 19
217 13.29 temperature 30 720 < th dose independent rect. 11 12
241 13.30 temperature 30 720 < th dose independent rect. 7 16
246 13.30 temperature 20 30 > th dose dependent rect. 12 14
250 13.31 temperature 30 720 > th dose independent sin 16 NA
288 13.33 temperature 30 720 > th dose independent rect. 15 2
306 13.34 temperature 30 720 < th dose independent rect. 24 23
307 13.34 humidity 80 10 < th dose dependent rect. 12 8
317 13.35 temperature 30 720 < th dose independent rect. 15 2
339 13.35 temperature 20 10 > th dose dependent rect. 10 23
341 13.35 temperature 30 10 < th dose dependent rect. 19 23
386 13.37 temperature 30 720 < th dose independent rect. 14 22
390 13.37 humidity 90 10 < th dose dependent sin 18 NA
393 13.37 humidity 80 10 < th dose dependent rect. 12 21
401 13.38 temperature 30 720 < th dose independent rect. 7 20
434 13.40 temperature 20 30 > th dose dependent rect. 12 17
482 13.42 temperature 30 10 < th dose dependent rect. 5 19
530 13.44 temperature 25 10 > th dose dependent rect. 12 10
557 13.45 temperature 30 720 < th dose independent rect. 11 23
565 13.45 temperature 30 90 < th dose dependent rect. 11 12
574 13.46 humidity 70 10 < th dose independent sin 17 NA
715 13.51 temperature 30 720 > th dose dependent rect. 13 6
755 13.52 temperature 30 720 > th dose dependent sin 16 NA
796 13.54 temperature 30 720 < th dose independent no NA NA
825 13.55 temperature 30 10 < th dose dependent rect. 11 13
864 13.57 temperature 30 720 > th dose independent no NA NA
865 13.57 humidity 70 30 < th dose independent rect. 12 8