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Os07g0147800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0125) R2 : 0.787
β1 : 0.81 (0.046) R2dD : 0.15 R2D : 0.0574
β2 : 1.03 (0.031) R2dC : 0.511 R2C : 0.491
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.485 (0.0268) R2dN8 : 0.205 R2N8 : 0.114
σ : 0.236
deviance : 25.4
__
_____
C
peak time of C : 2.81
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.06 0.216 11.4 0.75 1.04 -0.604 -0.0078 -0.34 0.66 2.72 79.92 4060 -- --
21.16 0.214 11.4 0.77 1.04 -0.614 -0.0271 -- 0.671 2.7 80 4059 -- --
21.06 0.214 11.4 0.75 1.04 -0.604 -- -0.341 0.66 2.72 79.91 4059 -- --
21.16 0.214 11.4 0.782 1.04 -0.618 -- -- 0.673 2.72 79.97 4059 -- --
41 0.3 11.5 0.873 -- -0.632 -- -0.0466 0.521 -- 79.91 4059 -- --
25.37 0.236 11.5 0.808 1.03 -- -0.0857 -- 0.484 2.81 -- -- -- --
25.4 0.236 11.5 0.81 1.03 -- -- -- 0.485 2.81 -- -- -- --
41.01 0.3 11.5 0.874 -- -0.632 -- -- 0.521 -- 79.97 4059 -- --
36.93 0.283 11.5 -- 1.01 -0.575 -- -- 0.628 2.78 81.47 7420 -- --
86.31 0.434 11.5 0.854 -- -- -- -- 0.511 -- -- -- -- --
42.69 0.306 11.5 -- 1.04 -- -- -- 0.395 2.82 -- -- -- --
61.17 0.365 11.5 -- -- -0.626 -- -- 0.424 -- 79.97 4059 -- --
105.54 0.48 11.5 -- -- -- -- -- 0.416 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.92 humidity 80 4320 < th dose independent rect. 10 17
11 21.01 humidity 80 14400 > th dose independent rect. 10 1
13 21.02 humidity 80 4320 > th dose independent rect. 9 18
56 21.19 humidity 80 4320 < th dose independent rect. 13 13
67 21.23 humidity 80 4320 < th dose independent sin 17 NA
71 21.23 humidity 80 270 > th dose independent rect. 23 22
74 21.25 humidity 70 4320 > th dose independent rect. 15 1
87 21.28 humidity 80 4320 < th dose independent rect. 10 2
89 21.28 humidity 80 4320 > th dose independent rect. 13 13
92 21.28 humidity 80 4320 < th dose independent rect. 20 23
128 21.33 humidity 80 4320 < th dose independent rect. 13 23
129 21.34 humidity 80 4320 > th dose independent sin 17 NA
131 21.34 humidity 80 4320 < th dose independent no NA NA
146 21.35 humidity 80 4320 < th dose independent rect. 17 23
153 21.36 humidity 80 4320 > th dose independent rect. 20 23
182 21.39 humidity 80 4320 > th dose independent rect. 13 23
194 21.41 humidity 80 720 > th dose independent rect. 8 7
209 21.43 humidity 80 4320 > th dose independent no NA NA
210 21.43 humidity 80 14400 > th dose independent rect. 9 7
216 21.43 humidity 80 4320 > th dose independent rect. 17 23
224 21.44 humidity 70 720 > th dose dependent rect. 2 14
233 21.45 humidity 70 720 > th dose dependent rect. 8 7
241 21.46 humidity 80 270 > th dose independent rect. 2 19
248 21.46 humidity 70 4320 > th dose dependent rect. 10 2
249 21.47 humidity 80 14400 < th dose independent rect. 10 5
251 21.47 humidity 80 270 > th dose independent rect. 2 17
258 21.47 humidity 80 270 < th dose independent rect. 20 22
298 21.50 humidity 70 720 > th dose dependent rect. 9 5
307 21.51 humidity 70 4320 > th dose dependent rect. 10 4
308 21.52 humidity 70 4320 < th dose independent rect. 15 1
323 21.54 humidity 80 270 > th dose independent rect. 8 11
338 21.54 humidity 70 4320 > th dose dependent rect. 9 6
350 21.56 humidity 80 14400 > th dose independent rect. 13 2
365 21.57 humidity 80 720 < th dose independent rect. 8 8
385 21.59 humidity 80 270 > th dose independent sin 0 NA
412 21.61 humidity 80 14400 < th dose independent rect. 13 2
417 21.61 humidity 70 270 > th dose dependent rect. 23 22
418 21.62 humidity 80 270 < th dose independent sin 23 NA
428 21.62 temperature 30 270 < th dose dependent rect. 11 9
450 21.63 humidity 70 270 > th dose dependent rect. 2 19
458 21.64 humidity 80 270 < th dose independent rect. 7 20
462 21.64 humidity 80 270 > th dose independent rect. 8 23
464 21.64 humidity 90 4320 > th dose dependent rect. 7 2
466 21.64 humidity 90 4320 > th dose dependent rect. 6 4
478 21.65 humidity 70 4320 > th dose dependent rect. 9 18
507 21.67 humidity 70 270 > th dose dependent sin 0 NA
522 21.68 humidity 70 720 > th dose dependent sin 3 NA
526 21.68 humidity 70 270 > th dose dependent rect. 9 10
548 21.69 temperature 20 30 > th dose dependent rect. 7 17
566 21.70 humidity 60 4320 > th dose dependent rect. 23 17
627 21.74 humidity 80 270 > th dose independent no NA NA
644 21.74 humidity 70 4320 > th dose dependent sin 23 NA
668 21.75 humidity 60 4320 > th dose dependent rect. 13 1
670 21.75 temperature 20 90 > th dose dependent rect. 7 11
692 21.76 humidity 80 270 > th dose independent rect. 13 23
723 21.77 humidity 60 4320 > th dose dependent rect. 13 3
836 21.81 humidity 80 270 < th dose independent no NA NA
843 21.81 humidity 80 720 > th dose independent rect. 24 16
847 21.81 humidity 80 270 < th dose independent rect. 24 23
879 21.82 humidity 80 720 > th dose independent rect. 2 14
880 21.82 humidity 80 720 < th dose independent rect. 3 14
919 21.83 humidity 80 720 < th dose independent rect. 5 12
932 21.83 humidity 70 4320 > th dose dependent no NA NA
947 21.83 humidity 70 4320 > th dose dependent rect. 2 23
950 21.84 humidity 90 14400 > th dose independent rect. 7 1
987 21.84 humidity 70 4320 > th dose dependent rect. 13 23