BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0147800 Os07g0147800|Os07g0147800
         (780 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G34730.1  | chr2:14654611-14657443 FORWARD LENGTH=826          126   6e-29

>AT2G34730.1 | chr2:14654611-14657443 FORWARD LENGTH=826
          Length = 825

 Score =  126 bits (316), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 180/723 (24%), Positives = 322/723 (44%), Gaps = 136/723 (18%)

Query: 121 QHLNKLKEDIRFLKSHSLVHDGDANGSCPMVCHHGKLVEIYEGFNGFKLLLVVVFRQIKE 180
           + L  L+E I    S + V D     S P   H  +   + +  +  K +L  V ++  +
Sbjct: 138 EELTNLREYIHINGSGATVDDSLGLDSSP---HETRSKTVDKMLDSLKSILETVLKRKND 194

Query: 181 MLSLFSASIRDLQWEHEMQLEVTSIMIGDCIKSLQDELERKLYEQSSIVNTLKKNWKETV 240
           M  L S+     Q EH+ Q E+ S ++   ++SL+DE E++L +Q +     +      +
Sbjct: 195 M-ELPSS----WQQEHDFQKEIESAVVTSVLRSLKDEYEQRLLDQKAEFGGNRSLILGNI 249

Query: 241 VQCGAIHEELIDIADMLLPSEEESNILNSKHEHFGNWSSGWK-HKFFGKKSGEERTPSSN 299
            +   + +EL  I    L  E          +  G      +  +   K SG   + SS 
Sbjct: 250 KEITGLRQELEAIRKSFLDHE--------NGDEAGEVGDRKRVEQLHRKMSGSLNSVSSV 301

Query: 300 EENISSATQKSVCPREVISEKSDFRHLKGMNREEMIKYFRFEISKLKRLHELSLQEKTEE 359
            EN     +       +I E ++   L+ M+ +EMI +F+ E++K+KR H+  +QE TE+
Sbjct: 302 WEN----GKHEESSTGLIPEHNET--LRHMSPDEMINHFKIEMNKMKRDHDYKIQELTEQ 355

Query: 360 LFKFKR------EKGSLA-LKYDPEFEPLRKKVPEIISRVDQIILNTINAPTAFSTNQVL 412
            F FKR      E+GS + +  D E   L+KK+P +IS++D+I++      +    +   
Sbjct: 356 CFTFKRKYLNLTERGSFSFVGKDKELGALKKKIPFVISKLDKILMEDEKFVSEGKND--- 412

Query: 413 EERGRLTGRIDSLYYANQNLRGLL---AEKMK------------------DIKD------ 445
                L  ++DSL   N+ L+  L   AEKM                   D++D      
Sbjct: 413 ---AGLKRQLDSLLLENRQLKDSLSDAAEKMSQLSQAEADHQELIRKLETDVEDSRNEAS 469

Query: 446 ------------------LSRQVSDASRKM---SFQLSLEEKLSRQLHKIKGDYEDLHIQ 484
                              ++Q +D    M   +++L LE+   ++  K K D+ED  ++
Sbjct: 470 IYEDVYGCFVTEFVGQIKCTKQETDLEHSMLREAYELLLEDLARKEARKSKEDFEDSCVK 529

Query: 485 STIRDEVYQTVTKRMFDDYRNSLQDPALTYQEKVTSLEAALSEKETALRLANEENQRLKE 544
           S + +E    +       Y+ ++++      +K+  L   ++EKE  LR    + +RLKE
Sbjct: 530 SVMMEECCSVI-------YKEAVKEA----HKKIVELNLHVTEKEGTLRSEMVDKERLKE 578

Query: 545 KLSK-----QEKEHGIQNNQD-------YPELIKQ---------DNEEMILRD-IEMEPH 582
           ++ +     +EKE+ +Q  ++         E++ Q         + +E  ++D IE    
Sbjct: 579 EIHRLGCLVKEKENLVQTAENNLATERKKIEVVSQQINDLQSQVERQETEIQDKIEALSV 638

Query: 583 VSPRRSYAISEQNAEYEELI-KLKQTLEIASTALKEVESNELDYNGILGKNEQEKQ---- 637
           VS R      E+   YE  I  L++ LE+A  +LKE++  +      L + + EK+    
Sbjct: 639 VSARE----LEKVKGYETKISSLREELELARESLKEMKDEKRKTEEKLSETKAEKETLKK 694

Query: 638 --LEFILVSIMDLSKEFVQIENKMSGDMKGSEKGPEILGYQCKHMVQQALVLTKKGLWYK 695
             +   LV    L K F  +E  ++   + +    + +  Q   +  Q   +  K   YK
Sbjct: 695 QLVSLDLVVPPQLIKGFDILEGLIAEKTQKTNSRLKNMQSQLSDLSHQINEVKGKASTYK 754

Query: 696 QMLDTRRSQLRKAEAEESIKVSKMVDVLGNKVSTLLSLVQKIYVTLEHYSPVFQQYPGLL 755
           Q L+ +   L+KAEAE        VD+LG++V TLL L++KIY+ L+HYSP+ + YPG++
Sbjct: 755 QRLEKKCCDLKKAEAE--------VDLLGDEVETLLDLLEKIYIALDHYSPILKHYPGII 806

Query: 756 DAF 758
           +  
Sbjct: 807 EIL 809



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.315    0.132    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,147,289
Number of extensions: 685440
Number of successful extensions: 3294
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 3295
Number of HSP's successfully gapped: 11
Length of query: 780
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 674
Effective length of database: 8,200,473
Effective search space: 5527118802
Effective search space used: 5527118802
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 116 (49.3 bits)