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Os07g0110300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Adrenodoxin.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0177) R2 : 0.598
β1 : -1.59 (0.0649) R2dD : 0.546 R2D : 0.383
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.511 (0.0379) R2dN8 : 0.215 R2N8 : 0.0518
σ : 0.333
deviance : 50.74
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.41 0.302 11.9 -1.56 0.0965 0.744 -0.48 0.911 -0.412 6.79 24.71 606 -- --
42.73 0.304 11.9 -1.44 0.0224 0.653 -0.434 -- -0.428 6.33 34.61 559 -- --
41.92 0.302 11.9 -1.54 0.103 0.742 -- 0.744 -0.397 6.06 24.7 613 -- --
42.58 0.304 11.9 -1.4 0.0959 0.679 -- -- -0.372 5.81 25 611 -- --
42.37 0.303 11.9 -1.53 -- 0.741 -- 0.709 -0.396 -- 25.1 601 -- --
48.91 0.328 11.9 -1.58 0.175 -- -0.273 -- -0.514 7.39 -- -- -- --
49.11 0.328 11.9 -1.59 0.174 -- -- -- -0.514 7.52 -- -- -- --
43.01 0.305 11.9 -1.41 -- 0.675 -- -- -0.37 -- 25.29 603 -- --
53.48 0.341 11.8 -- 0.171 1.28 -- -- 0.0112 7.05 24.36 47520 -- --
50.74 0.333 11.9 -1.59 -- -- -- -- -0.511 -- -- -- -- --
115.75 0.503 11.9 -- 0.163 -- -- -- -0.337 8.19 -- -- -- --
55.03 0.346 11.8 -- -- 1.28 -- -- 0.0119 -- 24.23 47520 -- --
117.21 0.505 11.9 -- -- -- -- -- -0.335 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.94 temperature 10.0 270 > th dose dependent rect. 2 15
2 39.22 temperature 10.0 270 > th dose dependent rect. 10 22
3 39.31 temperature 15.0 90 > th dose dependent rect. 23 9
6 39.49 temperature 10.0 720 > th dose dependent rect. 20 12
17 39.79 temperature 20.0 270 > th dose independent rect. 2 15
31 40.01 temperature 10.0 10 > th dose dependent rect. 14 19
36 40.06 temperature 15.0 10 > th dose dependent rect. 23 10
38 40.12 temperature 10.0 90 > th dose dependent rect. 14 18
42 40.16 temperature 30.0 720 < th dose dependent rect. 23 5
50 40.26 temperature 20.0 10 > th dose dependent rect. 1 8
61 40.37 temperature 20.0 90 > th dose dependent rect. 1 7
143 40.93 temperature 15.0 10 > th dose dependent rect. 12 21
161 41.04 temperature 20.0 270 > th dose independent rect. 23 9
162 41.05 temperature 20.0 270 > th dose independent rect. 3 3
168 41.07 temperature 25.0 720 < th dose dependent rect. 1 2
201 41.18 temperature 15.0 720 > th dose dependent sin 10 NA
202 41.18 temperature 25.0 720 < th dose dependent sin 12 NA
210 41.19 humidity 80.0 270 > th dose independent rect. 22 9
213 41.20 temperature 20.0 270 > th dose independent rect. 1 6
227 41.24 atmosphere 1015.0 10 < th dose dependent rect. 14 19
231 41.25 temperature 25.0 720 < th dose dependent rect. 8 21
245 41.29 temperature 25.0 720 < th dose dependent rect. 18 18
247 41.30 temperature 10.0 10 > th dose dependent rect. 4 16
263 41.33 temperature 10.0 720 > th dose dependent rect. 20 19
274 41.35 radiation 40.0 10 < th dose independent rect. 14 19
282 41.36 radiation 10.0 270 < th dose independent rect. 16 11
292 41.38 temperature 20.0 270 > th dose independent rect. 4 1
306 41.40 wind 1.0 10 > th dose independent rect. 9 5
324 41.43 precipitation 0.1 90 < th dose independent rect. 8 6
326 41.43 precipitation 0.1 90 < th dose dependent rect. 8 6
341 41.45 wind 9.0 90 < th dose independent rect. 14 18
356 41.47 temperature 10.0 90 > th dose independent rect. 8 6
357 41.47 atmosphere 995.0 90 > th dose independent rect. 8 6
358 41.47 atmosphere 1015.0 90 < th dose independent rect. 8 6
359 41.47 temperature 10.0 90 > th dose independent rect. 14 18
360 41.47 temperature 20.0 270 > th dose dependent rect. 3 3
383 41.50 temperature 10.0 10 > th dose independent rect. 9 5
385 41.50 atmosphere 995.0 10 > th dose independent rect. 9 5
386 41.50 atmosphere 1015.0 10 < th dose independent rect. 9 5
387 41.50 precipitation 0.1 10 < th dose independent rect. 9 5
388 41.50 radiation 40.0 90 < th dose independent rect. 14 18
389 41.50 temperature 20.0 270 > th dose independent rect. 12 19
390 41.50 temperature 10.0 10 > th dose independent rect. 14 19
392 41.50 precipitation 0.1 10 < th dose dependent rect. 9 5
405 41.52 temperature 10.0 720 > th dose dependent rect. 20 6
414 41.53 wind 7.0 270 < th dose independent rect. 17 10
445 41.57 wind 9.0 10 < th dose independent rect. 14 19
472 41.60 temperature 20.0 270 > th dose independent rect. 11 21
502 41.63 temperature 25.0 720 < th dose dependent no NA NA
503 41.63 temperature 20.0 1440 > th dose dependent rect. 24 1
523 41.65 radiation 1.0 10 > th dose independent rect. 9 5
527 41.66 temperature 10.0 1440 > th dose independent rect. 10 5
530 41.66 temperature 10.0 1440 > th dose independent rect. 15 19
561 41.69 temperature 30.0 270 < th dose independent rect. 17 10
591 41.72 precipitation 0.1 90 < th dose independent rect. 14 18
598 41.72 precipitation 0.1 90 < th dose dependent rect. 14 18
601 41.73 humidity 60.0 270 > th dose independent rect. 17 10
628 41.76 temperature 10.0 1440 > th dose dependent rect. 23 2
638 41.77 wind 9.0 90 < th dose independent rect. 8 6
665 41.80 humidity 50.0 270 > th dose dependent rect. 22 9
674 41.81 temperature 20.0 90 > th dose independent rect. 14 18
682 41.82 temperature 10.0 270 > th dose independent rect. 9 1
683 41.82 atmosphere 995.0 270 > th dose independent rect. 9 1
684 41.82 atmosphere 1015.0 270 < th dose independent rect. 9 1
687 41.82 temperature 10.0 270 > th dose independent rect. 10 23
703 41.84 humidity 50.0 270 > th dose independent rect. 9 1
704 41.84 wind 9.0 270 < th dose independent rect. 3 14
724 41.86 humidity 50.0 90 > th dose independent rect. 8 6
725 41.86 temperature 20.0 10 > th dose independent rect. 14 19
758 41.88 radiation 30.0 270 < th dose dependent rect. 16 10
765 41.89 wind 9.0 270 < th dose independent rect. 9 1
766 41.89 precipitation 0.1 270 < th dose independent rect. 9 1
767 41.89 precipitation 0.1 270 < th dose dependent rect. 9 1
802 41.92 temperature 20.0 10 > th dose independent rect. 2 7
851 41.95 temperature 30.0 270 < th dose independent rect. 7 15
875 41.96 wind 1.0 270 > th dose independent rect. 9 1
906 41.98 temperature 30.0 270 < th dose independent rect. 17 19
957 42.00 radiation 1.0 90 > th dose independent rect. 14 18
981 42.01 temperature 10.0 270 > th dose independent rect. 17 10
986 42.01 atmosphere 1015.0 270 < th dose independent rect. 3 14