Os07g0101500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sterol 4-alpha-methyl-oxidase (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os07g0101500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Sterol 4-alpha-methyl-oxidase (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.12 | 0.254 | 10.1 | 0.212 | 1.05 | 0.254 | -0.959 | -0.0441 | -0.295 | 22.4 | 25.8 | 26 | -- | -- |
| 28.95 | 0.253 | 10.1 | 0.231 | 1.06 | 0.252 | -0.951 | -- | -0.289 | 22.4 | 25.8 | 25 | -- | -- |
| 32.27 | 0.267 | 10.1 | 0.335 | 1.06 | 0.247 | -- | 0.292 | -0.265 | 22.4 | 25.7 | 26 | -- | -- |
| 32.62 | 0.268 | 10.1 | 0.268 | 1.06 | 0.255 | -- | -- | -0.284 | 22.4 | 25.8 | 28 | -- | -- |
| 75.54 | 0.405 | 10.1 | 0.0686 | -- | 0.677 | -- | -0.393 | -0.489 | -- | 25.22 | 714 | -- | -- |
| 32.98 | 0.269 | 10.1 | 0.295 | 0.987 | -- | -0.992 | -- | -0.208 | 21.7 | -- | -- | -- | -- |
| 36.69 | 0.284 | 10.1 | 0.333 | 0.993 | -- | -- | -- | -0.206 | 21.6 | -- | -- | -- | -- |
| 76.53 | 0.407 | 10.1 | 0.151 | -- | 0.633 | -- | -- | -0.44 | -- | 25.3 | 710 | -- | -- |
| 34.37 | 0.273 | 10.1 | -- | 1.05 | 0.3 | -- | -- | -0.345 | 22.5 | 25.7 | 38 | -- | -- |
| 95.1 | 0.456 | 10.1 | 0.341 | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
| 39.62 | 0.294 | 10.1 | -- | 0.994 | -- | -- | -- | -0.243 | 21.6 | -- | -- | -- | -- |
| 77.1 | 0.409 | 10.1 | -- | -- | 0.658 | -- | -- | -0.463 | -- | 25.3 | 710 | -- | -- |
| 98.17 | 0.462 | 10.1 | -- | -- | -- | -- | -- | -0.246 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.52 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 2 | 27.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 16 |
| 7 | 27.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 14 |
| 10 | 27.83 | temperature | 25 | 30 | < th | dose independent | rect. | 2 | 16 |
| 13 | 27.84 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 22 | 27.88 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 28 | 27.98 | temperature | 25 | 30 | > th | dose independent | rect. | 6 | 11 |
| 32 | 28.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 11 |
| 34 | 28.03 | temperature | 25 | 30 | > th | dose independent | sin | 0 | NA |
| 94 | 28.32 | temperature | 25 | 30 | < th | dose independent | sin | 0 | NA |
| 113 | 28.37 | temperature | 30 | 10 | < th | dose dependent | sin | 1 | NA |
| 163 | 28.49 | temperature | 10 | 10 | > th | dose dependent | sin | 1 | NA |
| 186 | 28.53 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 21 |
| 219 | 28.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 18 |
| 245 | 28.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 10 |
| 303 | 28.72 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 8 |
| 312 | 28.74 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 6 |
| 320 | 28.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 7 |
| 329 | 28.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 342 | 28.78 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 16 |
| 347 | 28.79 | temperature | 25 | 30 | > th | dose independent | rect. | 23 | 18 |
| 535 | 29.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 20 |
| 554 | 29.06 | temperature | 25 | 30 | > th | dose independent | rect. | 23 | 20 |
| 626 | 29.16 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 4 |
| 642 | 29.18 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 18 |
| 674 | 29.21 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 703 | 29.24 | temperature | 25 | 30 | > th | dose independent | rect. | 6 | 20 |
| 795 | 29.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 18 |
| 999 | 29.49 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 2 |