BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0101500 Os07g0101500|AK071749
(268 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G07420.1 | chr1:2277910-2280033 FORWARD LENGTH=267 404 e-113
AT2G29390.1 | chr2:12610758-12612799 REVERSE LENGTH=273 404 e-113
AT4G12110.1 | chr4:7254197-7256004 FORWARD LENGTH=299 201 3e-52
AT4G22753.1 | chr4:11952019-11953609 REVERSE LENGTH=292 192 1e-49
AT4G22756.1 | chr4:11955124-11956695 REVERSE LENGTH=300 192 2e-49
AT1G69640.1 | chr1:26193933-26195466 REVERSE LENGTH=261 58 5e-09
AT1G14290.1 | chr1:4880307-4881784 REVERSE LENGTH=260 56 2e-08
AT3G02590.1 | chr3:549340-550553 FORWARD LENGTH=280 53 2e-07
>AT1G07420.1 | chr1:2277910-2280033 FORWARD LENGTH=267
Length = 266
Score = 404 bits (1037), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/264 (71%), Positives = 215/264 (81%)
Query: 4 AAGLESAWEYLITHFSEFQLASIGTFLLHESVFFLSGLPSLLFERLGLFSKYKIQKKSNT 63
A+ +ES W+YL+THFS+FQLA IG+FLLHESVFFLSGLP + ER G SKYKIQ K+NT
Sbjct: 2 ASFVESGWQYLVTHFSDFQLACIGSFLLHESVFFLSGLPFIFLERQGFLSKYKIQTKNNT 61
Query: 64 PDYQNRCVVRLVLYHVCVNLPLTILSYRTFKFMGLRSTLPLPHWTXXXXXXXXXXXXEDF 123
P Q +C+ RL+LYH VNLPL + SY F+ MG+RS+ PLP W EDF
Sbjct: 62 PAAQGKCITRLLLYHFSVNLPLMLASYPVFRAMGMRSSFPLPSWKEVSAQILFYFIIEDF 121
Query: 124 IFYWGHRALHTKWLYQHVHSVHHEYATPFGLTSEYAHPAEILFLGFATVAGPALTGPHLF 183
+FYWGHR LH+KWLY++VHSVHHEYATPFGLTSEYAHPAEILFLGFAT+ GPALTGPHL
Sbjct: 122 VFYWGHRILHSKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLI 181
Query: 184 TLWVWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGAEFHDYHHRVLYTKSGNYSSTFIYM 243
TLW+WMVLRVLETVEAH GYHFPWS SNFLPLYGGA+FHDYHHR+LYTKSGNYSSTF+YM
Sbjct: 182 TLWLWMVLRVLETVEAHCGYHFPWSLSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFVYM 241
Query: 244 DWLFGTDKDYRKTKALEEKERTKH 267
DW+FGTDK YR+ K L+E K
Sbjct: 242 DWIFGTDKGYRRLKTLKENGDMKQ 265
>AT2G29390.1 | chr2:12610758-12612799 REVERSE LENGTH=273
Length = 272
Score = 404 bits (1037), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/267 (70%), Positives = 215/267 (80%), Gaps = 12/267 (4%)
Query: 7 LESAWEYLITHFSEFQLASIGTFLLHESVFFLSGLPSLLFERLGLFSKYKIQKKSNTPDY 66
+ES W+YL+THFS+FQLA IG+F+LHESVFFLSGLP + ER G S YKIQ KSNTP+
Sbjct: 5 VESGWKYLVTHFSDFQLACIGSFILHESVFFLSGLPYIFLERTGFLSNYKIQTKSNTPEA 64
Query: 67 QNRCVVRLVLYHVCVNLPLTILSYRTFKFMGLRSTLPLPHWTXXXXXXXXXXXXEDFIFY 126
Q +C+ RL+LYH CVNLPL + SY F+FMG+ S+ PLP W EDF+FY
Sbjct: 65 QGKCIARLLLYHCCVNLPLMMASYPVFRFMGMESSFPLPSWKVVSAQILFYFIIEDFVFY 124
Query: 127 WGHRALHTKWLYQHVHSVHHEYATPFGLTSEYAHPAEILFLGFATVAGPALTGPHLFTLW 186
WGHR LHTKWLY++VHSVHHEYATPFGLTSEYAHPAEILFLGFAT+ GPALTGPHL TLW
Sbjct: 125 WGHRILHTKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLITLW 184
Query: 187 VWMVLRVLETVEAHSGYHFPWSPSNFLPLYGG------------AEFHDYHHRVLYTKSG 234
+WM+LRV+ETVEAH GYHFPWSPSNFLPLYGG A+FHDYHHR+LYTKSG
Sbjct: 185 LWMMLRVIETVEAHCGYHFPWSPSNFLPLYGGSLILMWESFAYSADFHDYHHRLLYTKSG 244
Query: 235 NYSSTFIYMDWLFGTDKDYRKTKALEE 261
NYSSTF+YMDW+FGTDK YRK KAL+E
Sbjct: 245 NYSSTFVYMDWIFGTDKGYRKLKALKE 271
>AT4G12110.1 | chr4:7254197-7256004 FORWARD LENGTH=299
Length = 298
Score = 201 bits (512), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 139/239 (58%), Gaps = 7/239 (2%)
Query: 35 VFFLSGLPSLLFERL----GLFSKYKIQKKSN-TPDYQNRCVVRLVLYHVCVNLPLTILS 89
VF L LP + E GLF++YKIQ K N + +C ++ + V PL ++S
Sbjct: 48 VFSLVPLPLVFVELARSASGLFNRYKIQPKVNYSLSDMFKCYKDVMTMFILVVGPLQLVS 107
Query: 90 YRTFKFMGLRSTLPLPHWTXXXXXXXXXXXXEDFIFYWGHRALHTKWLYQHVHSVHHEYA 149
Y + + + +RS LPLP T ED+ YW HR H+KW Y +H VHHEY
Sbjct: 108 YPSIQMIEIRSGLPLPTITEMLSQLVVYFLIEDYTNYWVHRFFHSKWGYDKIHRVHHEYT 167
Query: 150 TPFGLTSEYAHPAEILFLGFATVAGPALTGPHLFTLWVWMVLRVLETVEAHSGYHFPWSP 209
P G + YAH AE+L LG T GPA+ H+ T W+W+ LR +E +E HSGY FPWSP
Sbjct: 168 APIGYAAPYAHWAEVLLLGIPTFMGPAIAPGHMITFWLWIALRQMEAIETHSGYDFPWSP 227
Query: 210 SNFLPLYGGAEFHDYHHRVLYTKSGNYSSTFIYMDWLFGTDKDYRKTKALEE--KERTK 266
+ ++P YGGAE+HDYHH V N++S F Y D+++GTDK YR K L E KE +K
Sbjct: 228 TKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGYRFQKKLLEQIKESSK 286
>AT4G22753.1 | chr4:11952019-11953609 REVERSE LENGTH=292
Length = 291
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 138/250 (55%), Gaps = 10/250 (4%)
Query: 28 TFLLHESVFFLSGLPSLLFERLGLFSKYKIQKKSN-TPDYQNRCVVRLVLYHVCVNLPLT 86
T L+ VF L+ P ++ E G F ++KIQKK + +C ++ + V L
Sbjct: 41 TILVLFLVFSLAPFPLVIVEWTGWFDQFKIQKKVKYSLSDMFQCYKEVMKLFLLVVGTLQ 100
Query: 87 ILSYRTFKFMGLRSTLPLPHWTXXXXXXXXXXXXEDFIFYWGHRALHTKWLYQHVHSVHH 146
I+SY + + +G+RS LPLP ED+ YW HR +H KW Y+ +H +HH
Sbjct: 101 IVSYPSIQMVGIRSGLPLPSLMEIVAQLVVYFLIEDYTNYWIHRWMHCKWGYEKIHRIHH 160
Query: 147 EYATPFGLTSEYAHPAEILFLGFATVAGPALTGPHLFTLWVWMVLRVLETVEAHSGYHFP 206
EY +P G S YAH AEIL LG T GPA+ H+ T W+W+ LR E +E HSGY FP
Sbjct: 161 EYTSPIGYASPYAHWAEILILGIPTFLGPAIAPGHIMTFWLWISLRQFEAIETHSGYDFP 220
Query: 207 WSPSNFLPLYGGAEFHDYHHRVLYTKSGNYSSTFIYMDWLFGTDKDYRKTKAL------- 259
WS + +P YGG E+HDYHH V N++S F Y D+++GTDK YR K L
Sbjct: 221 WSVTKLIPFYGGPEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGYRIHKKLLHHQIKE 280
Query: 260 --EEKERTKH 267
EEK KH
Sbjct: 281 EAEEKRVRKH 290
>AT4G22756.1 | chr4:11955124-11956695 REVERSE LENGTH=300
Length = 299
Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 136/239 (56%), Gaps = 7/239 (2%)
Query: 35 VFFLSGLPSLLFERL----GLFSKYKIQKK-SNTPDYQNRCVVRLVLYHVCVNLPLTILS 89
+F L LP + E LF++YKIQ K N+ +C ++ + V PL ++S
Sbjct: 48 IFSLVPLPLVFIESSQSTSDLFNRYKIQPKVKNSFSSMFKCYKDVMKMFILVVGPLQLVS 107
Query: 90 YRTFKFMGLRSTLPLPHWTXXXXXXXXXXXXEDFIFYWGHRALHTKWLYQHVHSVHHEYA 149
Y + + + +RS LPLP ED+ YW HR H KW Y+ H +HHEY
Sbjct: 108 YPSIQMIEIRSGLPLPSCMEIVAQLVVYFLVEDYTNYWVHRFFHCKWGYEKFHHIHHEYT 167
Query: 150 TPFGLTSEYAHPAEILFLGFATVAGPALTGPHLFTLWVWMVLRVLETVEAHSGYHFPWSP 209
P G + YAH AE+L LG T GPA+ H+ T W+W+ LR +E +E HSGY FPWS
Sbjct: 168 APIGYAAPYAHWAEVLLLGIPTFLGPAIAPGHMITFWLWIALRQIEAIETHSGYDFPWSL 227
Query: 210 SNFLPLYGGAEFHDYHHRVLYTKSGNYSSTFIYMDWLFGTDKDYRKTKAL--EEKERTK 266
+ ++P YGGAE+HDYHH V N++S F Y D+++GTDK YR K L + KE++K
Sbjct: 228 TKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGYRFQKKLLQQMKEKSK 286
>AT1G69640.1 | chr1:26193933-26195466 REVERSE LENGTH=261
Length = 260
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 126 YWGHRALH-TKWLYQHVHSVHHEYATPFGLTSEYAHPAEILFLGFATVAGP---ALTGPH 181
Y+ HR +H K+LY+H+HS HH P+ + Y HP E L L T+ G ++G
Sbjct: 111 YFMHRYMHQNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLD--TIGGALSFLVSGMS 168
Query: 182 LFTLWVWMVLRVLETVEAHSGYHFPWSPSNF--LPLYGGAEFHDYHHRVLYTKSGNYSST 239
T + ++TV+ H G W P N + + +HD HH+ LY N+S
Sbjct: 169 PRTSIFFFSFATIKTVDDHCGL---WLPGNLFHMVFKNNSAYHDIHHQ-LYGTKYNFSQP 224
Query: 240 FIYM-DWLFGTDKDYRKTKALEEKE 263
F M D + GT Y +LE++E
Sbjct: 225 FFVMWDRILGTYMPY----SLEKRE 245
>AT1G14290.1 | chr1:4880307-4881784 REVERSE LENGTH=260
Length = 259
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 126 YWGHRALH-TKWLYQHVHSVHHEYATPFGLTSEYAHPAEILFLGFATVAGP---ALTGPH 181
Y+ HR +H K+LY+H+HS HH P+ + Y HP E L L T+ G +G
Sbjct: 110 YFIHRYMHLNKFLYKHIHSQHHRLIVPYSYGALYNHPLEGLLLD--TIGGALSFLFSGMS 167
Query: 182 LFTLWVWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGAEFHDYHHRVLYTKSGNYSSTFI 241
T + ++TV+ H G P +P + + +HD HH+ LY N+S F
Sbjct: 168 PRTAIFFFSFATIKTVDDHCGLWLPGNPFHIF-FSNNSAYHDVHHQ-LYGTKYNFSQPFF 225
Query: 242 YM-DWLFGT 249
M D + GT
Sbjct: 226 VMWDRILGT 234
>AT3G02590.1 | chr3:549340-550553 FORWARD LENGTH=280
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 122 DFIFYWGHRALH-TKWLYQHVHSVHHEYATPFGLTSEYA----HPAEILFLGFATVAGPA 176
+F+ YW H+ LH K+LY+H+H+ HH Y L S +A HP + + V
Sbjct: 141 EFMIYWVHKELHDIKFLYKHLHATHHMYNKQNTL-SPFAGLAFHPLDGILQAIPHVIALF 199
Query: 177 LTGPHLFTLWVWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGAEFHDYHHRVLYTKSGNY 236
+ HL T + L + T H H N P+ GA +H HH T NY
Sbjct: 200 IVPIHLITHLSLLFLEGIWTASIHDCIH-----GNIWPI-MGAGYHTIHHT---TYKHNY 250
Query: 237 SSTFIYMDWLFGTDK-DYRKTKALEEKER 264
I+MDW+FG+ + + +EKE+
Sbjct: 251 GHYTIWMDWMFGSLMVPLAEKDSFKEKEK 279
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.139 0.460
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,030,498
Number of extensions: 246648
Number of successful extensions: 611
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 600
Number of HSP's successfully gapped: 11
Length of query: 268
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 171
Effective length of database: 8,447,217
Effective search space: 1444474107
Effective search space used: 1444474107
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 111 (47.4 bits)