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Os06g0724400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, Zim17-type family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.9 (0.0203) R2 : 0.814
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.3 (0.0515) R2dC : 0.818 R2C : 0.813
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0622 (0.0426) R2dN8 : 0.00112 R2N8 : -0.00392
σ : 0.382
deviance : 66.77
__
_____
C
peak time of C : 8.22
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.13 0.361 13.9 0.597 2.31 -6.77 0.123 23.3 0.0805 8.25 0.2497 280 -- --
63.4 0.374 13.9 0.337 2.3 0.11 0.258 -- 0.101 8.24 0.2497 280 -- --
59.1 0.358 13.9 0.619 2.3 -6.89 -- 23.6 0.0794 8.25 0.2672 285 -- --
61.76 0.366 13.9 0.408 2.24 -0.861 -- -- 0.122 8.2 1.485 295 -- --
340.41 0.859 13.9 0.767 -- -8.23 -- 24.5 0.112 -- 0.545 297 -- --
63.41 0.373 13.9 0.339 2.3 -- 0.258 -- 0.101 8.23 -- -- -- --
63.62 0.374 13.9 0.346 2.3 -- -- -- 0.101 8.23 -- -- -- --
339.42 0.858 14 0.471 -- -1.86 -- -- 0.104 -- 1.296 365 -- --
65.03 0.376 13.9 -- 2.28 -0.861 -- -- 0.0534 8.22 1.5 222 -- --
355.89 0.882 14 0.363 -- -- -- -- 0.127 -- -- -- -- --
66.77 0.382 13.9 -- 2.3 -- -- -- 0.0622 8.22 -- -- -- --
344.85 0.865 14 -- -- -1.86 -- -- 0.0577 -- 1.42 365 -- --
359.36 0.885 14 -- -- -- -- -- 0.0866 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.79 temperature 30.0 90 < th dose independent rect. 18 1
2 52.91 humidity 60.0 90 > th dose dependent rect. 18 1
3 53.13 humidity 70.0 90 > th dose independent rect. 18 1
5 53.89 atmosphere 995.0 270 > th dose dependent rect. 9 6
7 54.07 humidity 70.0 10 > th dose dependent rect. 18 1
8 54.08 temperature 30.0 10 < th dose independent rect. 18 1
13 54.16 humidity 70.0 10 > th dose independent rect. 18 1
15 54.23 temperature 30.0 30 < th dose dependent rect. 18 1
18 54.24 atmosphere 995.0 30 > th dose dependent rect. 10 8
20 54.33 atmosphere 1000.0 270 > th dose independent rect. 9 6
21 54.35 temperature 15.0 270 > th dose independent rect. 19 10
23 54.40 atmosphere 1005.0 30 > th dose dependent rect. 18 1
29 54.72 wind 3.0 30 > th dose dependent rect. 18 1
30 54.76 radiation 1.0 14400 < th dose dependent rect. 19 1
31 54.79 humidity 50.0 270 > th dose independent rect. 15 17
35 54.87 temperature 15.0 270 > th dose independent rect. 10 16
42 54.93 temperature 15.0 30 > th dose independent rect. 19 23
43 54.95 wind 3.0 10 > th dose independent rect. 18 1
48 55.02 radiation 1.0 30 < th dose dependent rect. 18 1
49 55.04 temperature 20.0 10 > th dose independent rect. 18 1
50 55.04 humidity 90.0 10 < th dose dependent rect. 18 1
56 55.11 radiation 1.0 30 < th dose independent rect. 18 1
62 55.18 temperature 15.0 270 > th dose independent rect. 21 17
63 55.19 temperature 15.0 270 > th dose independent rect. 19 20
66 55.21 humidity 80.0 30 < th dose independent rect. 18 1
72 55.25 temperature 25.0 90 > th dose dependent rect. 18 1
76 55.27 atmosphere 1000.0 30 > th dose independent rect. 18 1
80 55.28 temperature 10.0 30 > th dose independent rect. 18 1
85 55.28 atmosphere 1010.0 30 < th dose independent rect. 18 1
87 55.28 radiation 20.0 30 < th dose independent rect. 18 1
90 55.28 precipitation 0.1 30 < th dose independent rect. 18 1
92 55.28 temperature 10.0 30 > th dose dependent rect. 18 1
94 55.28 radiation 40.0 30 < th dose dependent rect. 18 1
96 55.28 precipitation 0.1 30 < th dose dependent rect. 18 1
98 55.29 radiation 20.0 30 < th dose dependent rect. 18 1
102 55.31 temperature 10.0 1440 > th dose independent rect. 19 1
105 55.31 temperature 30.0 1440 < th dose independent rect. 19 1
109 55.31 humidity 50.0 1440 > th dose independent rect. 19 1
111 55.31 atmosphere 995.0 1440 > th dose independent rect. 19 1
115 55.31 radiation 1.0 1440 < th dose independent rect. 19 1
136 55.31 temperature 10.0 1440 > th dose independent rect. 20 23
140 55.31 radiation 1.0 1440 < th dose dependent rect. 19 1
150 55.32 atmosphere 1015.0 30 < th dose dependent rect. 18 1
171 55.41 wind 9.0 30 < th dose independent rect. 18 1
173 55.41 atmosphere 995.0 30 > th dose independent rect. 19 23
192 55.51 temperature 30.0 270 < th dose independent rect. 10 4
193 55.52 wind 9.0 30 < th dose dependent rect. 18 1
219 55.61 precipitation 0.1 30 < th dose independent rect. 19 23
222 55.61 precipitation 0.1 30 < th dose dependent rect. 19 23
223 55.65 humidity 50.0 270 > th dose independent rect. 4 15
237 55.77 humidity 50.0 270 > th dose independent rect. 14 7
248 55.82 humidity 60.0 270 > th dose independent rect. 15 4
249 55.82 atmosphere 1010.0 270 < th dose independent rect. 19 9
263 55.89 temperature 30.0 270 < th dose independent rect. 21 17
264 55.90 temperature 30.0 270 < th dose independent rect. 15 17
275 55.99 humidity 60.0 90 > th dose independent rect. 17 17
294 56.20 temperature 10.0 1440 > th dose independent rect. 11 8
298 56.20 temperature 10.0 1440 > th dose independent rect. 19 16
301 56.20 atmosphere 995.0 1440 > th dose independent rect. 19 16
311 56.26 temperature 30.0 270 < th dose independent rect. 15 4
328 56.42 temperature 25.0 30 > th dose dependent rect. 18 6
339 56.47 radiation 1.0 30 > th dose independent rect. 10 9
344 56.47 wind 9.0 270 < th dose independent rect. 5 14
382 56.61 atmosphere 995.0 30 > th dose dependent rect. 18 16
403 56.65 precipitation 0.1 30 < th dose independent rect. 10 8
404 56.65 precipitation 0.1 30 < th dose dependent rect. 10 8
405 56.65 temperature 10.0 270 > th dose dependent rect. 19 9
418 56.69 wind 9.0 270 < th dose independent rect. 15 18
430 56.75 atmosphere 1000.0 10 > th dose dependent rect. 12 4
431 56.76 radiation 1.0 270 > th dose independent rect. 9 6
439 56.78 temperature 15.0 270 > th dose independent rect. 9 6
448 56.83 wind 7.0 30 < th dose independent rect. 18 16
459 56.88 atmosphere 1015.0 270 < th dose dependent rect. 20 7
460 56.89 temperature 20.0 270 > th dose independent rect. 15 4
461 56.89 temperature 25.0 30 > th dose independent rect. 18 5
482 56.94 atmosphere 1015.0 30 < th dose independent rect. 10 8
483 56.94 temperature 10.0 30 > th dose independent rect. 18 16
485 56.94 atmosphere 995.0 30 > th dose independent rect. 18 16
489 56.96 radiation 40.0 270 < th dose independent rect. 15 18
502 56.99 precipitation 0.1 270 < th dose independent rect. 9 6
506 56.99 precipitation 0.1 270 < th dose dependent rect. 9 6
509 57.01 temperature 15.0 10 > th dose independent rect. 23 17
512 57.02 atmosphere 1015.0 270 < th dose independent rect. 9 6
513 57.02 temperature 10.0 270 > th dose independent rect. 15 18
515 57.02 humidity 50.0 90 > th dose dependent rect. 17 17
517 57.04 radiation 1.0 270 < th dose independent rect. 19 10
519 57.04 radiation 10.0 270 < th dose dependent rect. 19 10
521 57.05 humidity 60.0 270 > th dose independent rect. 10 4
534 57.07 precipitation 0.1 30 < th dose independent rect. 18 16
538 57.07 precipitation 0.1 30 < th dose dependent rect. 18 16
541 57.08 temperature 30.0 270 < th dose independent rect. 19 10
542 57.08 humidity 50.0 270 > th dose independent rect. 19 10
544 57.08 atmosphere 995.0 270 > th dose independent rect. 19 10
548 57.08 temperature 10.0 270 > th dose independent rect. 5 14
549 57.08 atmosphere 1015.0 270 < th dose independent rect. 5 14
555 57.11 wind 9.0 30 < th dose independent rect. 19 23
558 57.12 humidity 50.0 30 > th dose independent rect. 19 23
559 57.12 temperature 25.0 30 > th dose dependent rect. 18 8
562 57.13 precipitation 0.1 270 < th dose independent rect. 10 16
564 57.13 precipitation 0.1 270 < th dose dependent rect. 10 16
569 57.15 temperature 15.0 270 > th dose independent rect. 8 21
581 57.19 wind 9.0 270 < th dose independent rect. 9 6
584 57.19 wind 9.0 270 < th dose independent rect. 19 10
601 57.23 wind 9.0 30 < th dose independent rect. 10 8
608 57.24 temperature 15.0 10 > th dose independent rect. 20 11
612 57.24 humidity 50.0 270 > th dose dependent rect. 15 4
620 57.26 atmosphere 995.0 270 > th dose independent rect. 10 16
624 57.27 wind 9.0 270 < th dose independent rect. 14 7
636 57.29 humidity 50.0 270 > th dose independent rect. 2 8
648 57.30 wind 1.0 30 > th dose independent rect. 10 8
653 57.31 humidity 90.0 270 < th dose independent rect. 10 4
668 57.33 temperature 10.0 270 > th dose independent rect. 2 8
669 57.33 atmosphere 995.0 270 > th dose independent rect. 2 8
670 57.33 atmosphere 1015.0 270 < th dose independent rect. 2 8
676 57.33 radiation 1.0 90 < th dose dependent rect. 5 14
680 57.35 wind 1.0 270 > th dose independent rect. 9 6
684 57.36 wind 9.0 270 < th dose independent rect. 2 8
737 57.45 radiation 40.0 270 < th dose independent rect. 14 7
770 57.50 precipitation 0.1 270 < th dose independent rect. 2 8
772 57.50 precipitation 0.1 270 < th dose dependent rect. 2 8
773 57.50 radiation 1.0 90 < th dose dependent rect. 7 12
774 57.51 precipitation 0.1 270 < th dose independent rect. 19 10
778 57.51 precipitation 0.1 270 < th dose dependent rect. 19 10
779 57.52 radiation 40.0 270 < th dose independent rect. 10 4
783 57.52 precipitation 0.1 270 < th dose independent rect. 15 18
786 57.52 radiation 1.0 90 < th dose dependent rect. 9 10
788 57.52 precipitation 0.1 270 < th dose dependent rect. 15 18
802 57.55 radiation 1.0 90 < th dose independent rect. 7 12
818 57.57 humidity 90.0 270 < th dose independent rect. 9 6
820 57.57 humidity 90.0 30 < th dose independent rect. 10 8
851 57.61 atmosphere 1010.0 270 < th dose independent rect. 10 16
858 57.62 radiation 1.0 90 < th dose independent rect. 10 9
873 57.64 radiation 1.0 90 < th dose independent rect. 5 14
889 57.66 precipitation 0.1 270 < th dose independent rect. 21 17
895 57.66 precipitation 0.1 270 < th dose dependent rect. 21 17
899 57.67 radiation 1.0 30 < th dose dependent sin 21 NA
930 57.70 temperature 10.0 270 > th dose independent rect. 14 7
933 57.70 atmosphere 995.0 270 > th dose independent rect. 21 17
940 57.72 humidity 60.0 270 > th dose independent rect. 11 2
948 57.72 radiation 40.0 90 < th dose independent rect. 17 17
962 57.74 temperature 15.0 10 > th dose independent rect. 12 17
984 57.77 wind 1.0 270 > th dose independent rect. 14 7
996 57.78 atmosphere 1015.0 270 < th dose independent rect. 14 7