Os06g0715000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0715000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.65 | 0.247 | 10.4 | -0.676 | 0.394 | 0.679 | -0.0601 | -0.0403 | -0.0692 | 8.12 | 9.35 | 4716 | -- | -- |
| 27.65 | 0.245 | 10.4 | -0.67 | 0.397 | 0.682 | -0.0534 | -- | -0.0677 | 8.12 | 8.77 | 4730 | -- | -- |
| 27.66 | 0.245 | 10.4 | -0.678 | 0.395 | 0.68 | -- | -0.039 | -0.0691 | 8.14 | 9.417 | 4727 | -- | -- |
| 27.66 | 0.245 | 10.4 | -0.67 | 0.397 | 0.684 | -- | -- | -0.0674 | 8.14 | 8.713 | 4741 | -- | -- |
| 35.57 | 0.278 | 10.4 | -0.67 | -- | 0.703 | -- | -0.0128 | -0.0784 | -- | 7.176 | 5787 | -- | -- |
| 35.87 | 0.281 | 10.4 | -0.347 | 0.383 | -- | -0.103 | -- | 0.0673 | 7.98 | -- | -- | -- | -- |
| 35.9 | 0.281 | 10.4 | -0.35 | 0.383 | -- | -- | -- | 0.0675 | 8.01 | -- | -- | -- | -- |
| 35.56 | 0.278 | 10.4 | -0.686 | -- | 0.706 | -- | -- | -0.0819 | -- | 6.823 | 5791 | -- | -- |
| 34.66 | 0.276 | 10.4 | -- | 0.431 | 0.648 | -- | -- | 0.0296 | 6.41 | 8.713 | 4741 | -- | -- |
| 43.91 | 0.31 | 10.4 | -0.346 | -- | -- | -- | -- | 0.0724 | -- | -- | -- | -- | -- |
| 39.13 | 0.293 | 10.3 | -- | 0.381 | -- | -- | -- | 0.106 | 8.07 | -- | -- | -- | -- |
| 43.71 | 0.308 | 10.4 | -- | -- | 0.414 | -- | -- | 0.0583 | -- | 14.8 | 1435 | -- | -- |
| 47.07 | 0.32 | 10.4 | -- | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.32 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 5 | 26.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 6 | 26.96 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 11 | 27.01 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 12 | 27.02 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 14 | 27.02 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 5 |
| 16 | 27.03 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 5 |
| 20 | 27.05 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 23 | 27.07 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 62 | 27.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 178 | 27.34 | temperature | 10 | 4320 | > th | dose dependent | sin | 10 | NA |
| 190 | 27.35 | temperature | 30 | 4320 | < th | dose dependent | sin | 10 | NA |
| 224 | 27.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 389 | 27.51 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 527 | 27.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 710 | 27.70 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 777 | 27.73 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 801 | 27.74 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 827 | 27.76 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 930 | 27.80 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 963 | 27.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 988 | 27.83 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 17 |