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Os06g0714800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF581 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0517) R2 : 0.882
β1 : -- (--) R2dD : -- R2D : --
β2 : 7.3 (0.132) R2dC : 0.814 R2C : 0.703
β3 : 3.44 (0.133) R2dE : 0.177 R2E : 0.0703
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.203 (0.109) R2dN8 : 0.00117 R2N8 : -0.00437
σ : 0.969
deviance : 432.44
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C
peak time of C : 20.4
E
wheather : temperature
threshold : 20.27
memory length : 130
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 23.4
open length of G : 5.47

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
407.99 0.949 10.2 0.35 7.31 3.41 0.665 -3 0.205 20.4 20.3 128 23.5 5.34
422.5 0.957 10.2 0.627 7.32 3.39 0.67 -- 0.261 20.4 20.3 132 23.5 5.32
408.85 0.942 10.2 0.323 7.31 3.41 -- -3.02 0.211 20.4 20.35 130 23.5 5.35
423.5 0.958 10.2 0.581 7.32 3.39 -- -- 0.218 20.4 20.3 129 23.4 5.42
2966.91 2.54 10.2 0.761 -- 3.25 -- -2.38 0.432 -- 18.7 39 23.2 5.38
763.17 1.3 10.2 0.87 6.98 -- 0.629 -- 0.337 21.6 -- -- -- --
764.64 1.29 10.2 0.846 6.98 -- -- -- 0.336 21.6 -- -- -- --
575.98 1.12 9.86 0.533 -- 5.88 -- -- 0.477 -- 14.59 219 12.9 14.4
432.44 0.969 10.2 -- 7.3 3.44 -- -- 0.203 20.4 20.27 130 23.4 5.47
3644.35 2.82 10 0.901 -- -- -- -- 0.321 -- -- -- -- --
783.52 1.31 10.2 -- 6.98 -- -- -- 0.242 21.6 -- -- -- --
570.58 1.11 10 -- -- 5.85 -- -- 0.269 -- 14.39 215 12.9 14.3
3665.75 2.83 10 -- -- -- -- -- 0.221 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 433.69 temperature 20.0 90 > th dose independent rect. 24 5
4 448.95 temperature 20.0 270 > th dose independent rect. 24 2
7 461.69 temperature 20.0 90 > th dose independent rect. 14 15
18 482.63 temperature 15.0 90 > th dose dependent rect. 24 5
21 485.64 temperature 15.0 270 > th dose dependent rect. 24 2
30 500.20 temperature 15.0 270 > th dose dependent rect. 22 6
34 503.04 temperature 10.0 90 > th dose dependent rect. 14 15
58 514.89 humidity 70.0 90 > th dose dependent rect. 24 5
76 521.33 humidity 80.0 90 > th dose independent rect. 24 5
114 532.72 radiation 40.0 90 < th dose independent rect. 13 16
124 536.45 radiation 1.0 30 < th dose independent rect. 24 6
128 536.97 humidity 80.0 270 > th dose independent rect. 24 2
138 539.35 radiation 10.0 10 < th dose dependent rect. 24 6
147 541.35 humidity 60.0 270 > th dose dependent rect. 24 2
149 541.60 radiation 10.0 90 < th dose dependent rect. 24 5
165 542.78 atmosphere 1010.0 90 < th dose independent rect. 24 5
171 543.11 temperature 30.0 90 < th dose independent rect. 24 5
172 543.11 humidity 50.0 90 > th dose independent rect. 24 5
175 543.11 atmosphere 995.0 90 > th dose independent rect. 24 5
179 543.11 temperature 10.0 90 > th dose independent rect. 5 19
182 543.16 wind 9.0 90 < th dose independent rect. 24 5
187 543.66 precipitation 0.1 90 < th dose independent rect. 5 10
188 543.66 precipitation 0.1 90 < th dose dependent rect. 5 10
190 543.80 radiation 1.0 30 > th dose independent sin 4 NA
191 543.83 radiation 1.0 30 < th dose independent sin 4 NA
199 544.76 temperature 20.0 270 > th dose independent rect. 22 19
202 545.52 atmosphere 1015.0 90 < th dose independent rect. 14 15
206 545.77 temperature 10.0 90 > th dose independent rect. 5 10
207 545.77 atmosphere 1015.0 90 < th dose independent rect. 5 10
208 545.77 temperature 10.0 90 > th dose independent rect. 15 14
214 546.40 wind 9.0 90 < th dose independent rect. 15 14
219 546.54 atmosphere 995.0 90 > th dose independent rect. 5 9
226 546.76 wind 9.0 90 < th dose dependent rect. 24 5
237 547.35 radiation 1.0 90 < th dose dependent sin 6 NA
238 547.37 wind 9.0 90 < th dose independent rect. 5 19
246 547.94 temperature 20.0 90 > th dose independent rect. 7 22
250 548.22 precipitation 0.1 270 < th dose independent rect. 3 10
251 548.22 precipitation 0.1 270 < th dose dependent rect. 3 10
271 549.15 precipitation 0.1 90 < th dose independent rect. 24 5
272 549.15 precipitation 0.1 90 < th dose dependent rect. 24 5
273 549.30 wind 9.0 90 < th dose independent rect. 5 9
279 549.86 radiation 1.0 90 < th dose dependent rect. 24 15
280 550.13 wind 1.0 270 > th dose independent rect. 3 20
290 551.05 wind 1.0 270 > th dose independent rect. 2 22
291 551.09 precipitation 0.1 90 < th dose independent rect. 5 19
292 551.09 precipitation 0.1 90 < th dose dependent rect. 5 19
311 552.49 wind 3.0 30 < th dose dependent rect. 24 5
314 552.87 atmosphere 995.0 90 > th dose independent rect. 14 15
326 553.69 wind 9.0 270 < th dose dependent rect. 24 2
333 554.22 wind 1.0 90 > th dose independent rect. 5 19
347 555.12 precipitation 0.1 270 < th dose independent rect. 2 22
348 555.12 precipitation 0.1 270 < th dose dependent rect. 2 22
355 555.60 atmosphere 1010.0 270 < th dose independent rect. 24 2
360 555.82 precipitation 0.1 270 < th dose independent rect. 24 2
361 555.82 precipitation 0.1 270 < th dose dependent rect. 24 2
365 555.87 temperature 30.0 270 < th dose independent rect. 24 2
366 555.87 humidity 50.0 270 > th dose independent rect. 24 2
369 555.87 atmosphere 995.0 270 > th dose independent rect. 24 2
370 555.87 radiation 1.0 270 < th dose independent rect. 24 2
375 555.87 temperature 10.0 270 > th dose independent rect. 2 22
376 555.87 radiation 1.0 270 < th dose dependent rect. 24 2
381 556.04 temperature 30.0 90 < th dose independent rect. 5 8
386 556.24 wind 9.0 270 < th dose independent rect. 24 2
396 556.81 radiation 1.0 30 > th dose independent rect. 5 9
418 557.13 atmosphere 1015.0 90 < th dose dependent rect. 1 4
467 559.00 atmosphere 995.0 90 > th dose independent rect. 5 19
469 559.02 temperature 10.0 90 > th dose dependent rect. 7 22
473 559.17 precipitation 0.1 90 < th dose independent rect. 14 15
474 559.17 precipitation 0.1 90 < th dose dependent rect. 14 15
487 559.59 wind 3.0 270 < th dose dependent rect. 24 2
490 559.78 temperature 10.0 270 > th dose independent rect. 3 10
491 559.78 atmosphere 995.0 270 > th dose independent rect. 3 10
492 559.78 atmosphere 1015.0 270 < th dose independent rect. 3 10
546 561.82 wind 9.0 270 < th dose independent rect. 3 10
558 562.44 temperature 30.0 90 < th dose independent rect. 5 10
560 562.48 wind 3.0 90 < th dose independent rect. 24 5
565 563.34 wind 1.0 90 > th dose independent rect. 5 9
570 563.68 temperature 20.0 90 > th dose independent rect. 9 20
582 564.12 humidity 50.0 90 > th dose independent rect. 5 19
627 565.57 temperature 30.0 90 < th dose dependent rect. 5 20
628 565.58 wind 9.0 270 < th dose independent rect. 2 22
655 567.05 wind 3.0 270 < th dose independent rect. 24 2
685 568.71 humidity 50.0 90 > th dose independent rect. 5 9
833 573.56 temperature 30.0 270 < th dose dependent rect. 17 16
838 573.80 temperature 10.0 1440 > th dose independent rect. 1 5
841 573.80 temperature 30.0 1440 < th dose independent rect. 1 5
845 573.80 humidity 50.0 1440 > th dose independent rect. 1 5
854 573.80 atmosphere 995.0 1440 > th dose independent rect. 1 5
855 573.80 radiation 20.0 1440 < th dose independent rect. 1 5
864 573.80 temperature 10.0 1440 > th dose independent rect. 6 19
925 574.93 temperature 30.0 90 < th dose independent rect. 5 19
940 575.35 humidity 50.0 270 > th dose independent rect. 3 10
982 575.91 radiation 1.0 270 < th dose independent rect. 3 21
993 576.36 wind 1.0 270 > th dose independent rect. 3 10