Os06g0705000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0705000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.37 | 0.442 | 7.85 | 1.6 | 1.14 | -1.55 | -0.489 | 1.01 | 0.292 | 1.69 | 23.69 | 6254 | -- | -- |
| 89.62 | 0.441 | 7.82 | 1.95 | 1.11 | -1.55 | -0.583 | -- | 0.373 | 1.65 | 23.6 | 6313 | -- | -- |
| 89.24 | 0.44 | 7.85 | 1.61 | 1.14 | -1.55 | -- | 1.04 | 0.289 | 1.77 | 23.69 | 6315 | -- | -- |
| 90.43 | 0.443 | 7.8 | 1.97 | 1.14 | -1.52 | -- | -- | 0.402 | 1.77 | 23.63 | 6257 | -- | -- |
| 157.47 | 0.584 | 7.84 | 1.61 | -- | -1.72 | -- | 0.903 | 0.28 | -- | 23.7 | 3911 | -- | -- |
| 172.29 | 0.615 | 7.68 | 2.74 | 1.22 | -- | -0.386 | -- | 0.973 | 1.67 | -- | -- | -- | -- |
| 172.86 | 0.616 | 7.67 | 2.75 | 1.22 | -- | -- | -- | 0.975 | 1.73 | -- | -- | -- | -- |
| 157.34 | 0.584 | 7.8 | 1.99 | -- | -1.68 | -- | -- | 0.391 | -- | 23.7 | 3934 | -- | -- |
| 104.34 | 0.476 | 7.9 | -- | 1.17 | -2.52 | -- | -- | -0.00924 | 1.75 | 19.4 | 47520 | -- | -- |
| 263.82 | 0.759 | 7.66 | 2.8 | -- | -- | -- | -- | 1 | -- | -- | -- | -- | -- |
| 372.56 | 0.903 | 7.74 | -- | 1.27 | -- | -- | -- | 0.669 | 1.79 | -- | -- | -- | -- |
| 187.42 | 0.638 | 7.89 | -- | -- | -2.58 | -- | -- | -0.0244 | -- | 19.61 | 47520 | -- | -- |
| 470.99 | 1.01 | 7.73 | -- | -- | -- | -- | -- | 0.692 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 2 | 89.73 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 3 | 89.99 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 5 | 90.40 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 7 | 90.86 | temperature | 20 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 12 | 91.15 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 5 |
| 24 | 91.53 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 16 |
| 26 | 91.54 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 12 |
| 54 | 91.93 | temperature | 20 | 4320 | > th | dose dependent | sin | 10 | NA |
| 76 | 92.12 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 6 |
| 80 | 92.15 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 6 |
| 111 | 92.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 125 | 92.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 131 | 92.55 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 133 | 92.56 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 16 |
| 165 | 92.76 | temperature | 25 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 169 | 92.77 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 15 |
| 197 | 92.91 | temperature | 20 | 720 | > th | dose dependent | sin | 11 | NA |
| 202 | 92.92 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 257 | 93.12 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 12 |
| 259 | 93.13 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 289 | 93.23 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 305 | 93.32 | temperature | 10 | 4320 | > th | dose dependent | sin | 10 | NA |
| 381 | 93.53 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 388 | 93.55 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 395 | 93.56 | temperature | 30 | 4320 | < th | dose dependent | sin | 10 | NA |
| 522 | 93.91 | temperature | 10 | 720 | > th | dose dependent | sin | 11 | NA |
| 524 | 93.91 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 5 |
| 545 | 93.97 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 581 | 94.06 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 4 |
| 602 | 94.12 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 619 | 94.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 692 | 94.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 693 | 94.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 804 | 94.54 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 835 | 94.62 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 5 |