Os06g0702800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0702800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.54 | 0.26 | 12.4 | -0.557 | 0.729 | -0.722 | -0.168 | -0.373 | 0.0522 | 1.78 | 25.19 | 242 | -- | -- |
| 30.72 | 0.258 | 12.4 | -0.606 | 0.726 | -0.69 | -0.279 | -- | 0.0326 | 1.8 | 25.3 | 250 | -- | -- |
| 30.63 | 0.258 | 12.4 | -0.539 | 0.728 | -0.727 | -- | -0.459 | 0.058 | 1.78 | 25.17 | 236 | -- | -- |
| 30.94 | 0.259 | 12.4 | -0.612 | 0.73 | -0.688 | -- | -- | 0.0363 | 1.85 | 25.56 | 251 | -- | -- |
| 50.38 | 0.331 | 12.4 | -0.645 | -- | -0.904 | -- | -0.29 | 0.000964 | -- | 27.3 | 960 | -- | -- |
| 37.63 | 0.288 | 12.4 | -0.442 | 0.632 | -- | -0.25 | -- | 0.181 | 1.45 | -- | -- | -- | -- |
| 37.88 | 0.288 | 12.4 | -0.434 | 0.632 | -- | -- | -- | 0.182 | 1.46 | -- | -- | -- | -- |
| 50.39 | 0.331 | 12.4 | -0.664 | -- | -0.86 | -- | -- | 0.00836 | -- | 28.1 | 979 | -- | -- |
| 39.76 | 0.294 | 12.4 | -- | 0.695 | -0.441 | -- | -- | 0.149 | 1.65 | 25.21 | 192 | -- | -- |
| 62.41 | 0.369 | 12.4 | -0.409 | -- | -- | -- | -- | 0.196 | -- | -- | -- | -- | -- |
| 42.84 | 0.306 | 12.4 | -- | 0.624 | -- | -- | -- | 0.23 | 1.43 | -- | -- | -- | -- |
| 60.56 | 0.362 | 12.4 | -- | -- | -0.582 | -- | -- | 0.133 | -- | 28.7 | 965 | -- | -- |
| 66.81 | 0.382 | 12.3 | -- | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.10 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 2 | 29.17 | temperature | 15 | 270 | > th | dose dependent | sin | 10 | NA |
| 4 | 29.23 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 5 | 29.31 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 14 |
| 7 | 29.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 16 |
| 13 | 29.48 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 10 |
| 139 | 30.33 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 9 |
| 147 | 30.34 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 239 | 30.58 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 305 | 30.71 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 20 |
| 361 | 30.79 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 382 | 30.82 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 413 | 30.88 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 428 | 30.89 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 445 | 30.92 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 473 | 30.97 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 509 | 31.02 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 17 |
| 510 | 31.02 | temperature | 15 | 30 | > th | dose dependent | rect. | 9 | 20 |
| 652 | 31.20 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 23 |
| 852 | 31.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 891 | 31.48 | temperature | 20 | 270 | > th | dose independent | sin | 12 | NA |
| 956 | 31.55 | temperature | 20 | 270 | < th | dose independent | rect. | 18 | 15 |
| 974 | 31.57 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 23 |
| 997 | 31.58 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |