Os06g0699500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Macrophage migration inhibitory factor family protein.
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Os06g0699500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Macrophage migration inhibitory factor family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.29 | 0.515 | 12.2 | -0.501 | 1.98 | -1.05 | -1.27 | 0.818 | -0.737 | 20.3 | 14.35 | 1250 | -- | -- |
| 120.69 | 0.512 | 12.2 | -0.442 | 1.84 | -1.16 | -1.49 | -- | -0.713 | 20.3 | 14.55 | 1191 | -- | -- |
| 121.8 | 0.514 | 12.2 | -0.57 | 1.66 | -1.34 | -- | 2.07 | -0.776 | 20.4 | 15.68 | 1104 | -- | -- |
| 127.88 | 0.527 | 12.2 | -0.411 | 1.71 | -1.19 | -- | -- | -0.707 | 20.4 | 17.77 | 1103 | -- | -- |
| 131.33 | 0.534 | 12.2 | -0.739 | -- | -3.47 | -- | 2.62 | -0.846 | -- | 4.45 | 1041 | -- | -- |
| 139.96 | 0.555 | 12.2 | -0.341 | 2.32 | -- | -1.35 | -- | -0.529 | 20.6 | -- | -- | -- | -- |
| 145.83 | 0.566 | 12.2 | -0.298 | 2.32 | -- | -- | -- | -0.53 | 20.6 | -- | -- | -- | -- |
| 138.56 | 0.548 | 12.2 | -0.627 | -- | -3.45 | -- | -- | -0.816 | -- | 4.074 | 1037 | -- | -- |
| 131.42 | 0.534 | 12.2 | -- | 1.72 | -1.31 | -- | -- | -0.673 | 20.2 | 10.02 | 1164 | -- | -- |
| 449.65 | 0.991 | 12.1 | -0.306 | -- | -- | -- | -- | -0.55 | -- | -- | -- | -- | -- |
| 148.17 | 0.569 | 12.2 | -- | 2.32 | -- | -- | -- | -0.496 | 20.6 | -- | -- | -- | -- |
| 146.9 | 0.565 | 12.2 | -- | -- | -3.36 | -- | -- | -0.729 | -- | 4.904 | 1029 | -- | -- |
| 452.12 | 0.992 | 12.1 | -- | -- | -- | -- | -- | -0.517 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.07 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 3 | 111.43 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 17 | 112.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 23 |
| 18 | 112.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 20 | 113.09 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 21 | 113.25 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 22 | 113.42 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 25 | 113.60 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 32 | 114.33 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 38 | 114.61 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 40 | 114.64 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 21 |
| 41 | 114.64 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 55 | 115.08 | wind | 5.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 56 | 115.16 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 60 | 115.22 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 61 | 115.22 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 63 | 115.25 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 66 | 115.30 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 68 | 115.37 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 77 | 115.54 | wind | 7.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 79 | 115.55 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 81 | 115.55 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 82 | 115.55 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 84 | 115.55 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 85 | 115.55 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 86 | 115.55 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 87 | 115.56 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 94 | 115.79 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 95 | 115.80 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 3 |
| 96 | 115.80 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 108 | 115.98 | wind | 9.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 109 | 115.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 112 | 115.98 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 114 | 115.98 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 115 | 115.98 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 116 | 115.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 129 | 116.20 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 10 |
| 137 | 116.31 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 151 | 116.51 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 153 | 116.51 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 162 | 116.60 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 164 | 116.61 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 201 | 116.91 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 17 |
| 208 | 116.95 | radiation | 10.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 219 | 117.06 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 234 | 117.10 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 237 | 117.11 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 241 | 117.14 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 261 | 117.32 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 3 |
| 264 | 117.35 | wind | 5.0 | 90 | < th | dose independent | rect. | 21 | 8 |
| 271 | 117.40 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 299 | 117.55 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 313 | 117.63 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 314 | 117.63 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 317 | 117.68 | wind | 5.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 328 | 117.74 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 17 |
| 356 | 117.87 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 361 | 117.89 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 363 | 117.90 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 419 | 118.09 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 427 | 118.12 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 441 | 118.13 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 463 | 118.23 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 478 | 118.26 | wind | 7.0 | 30 | < th | dose dependent | rect. | 22 | 7 |
| 501 | 118.33 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 565 | 118.49 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 576 | 118.51 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 3 |
| 592 | 118.53 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 602 | 118.56 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 605 | 118.60 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 651 | 118.69 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 660 | 118.72 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 741 | 118.95 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 769 | 119.01 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 784 | 119.06 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 789 | 119.09 | wind | 7.0 | 720 | < th | dose independent | rect. | 17 | 1 |
| 832 | 119.24 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 877 | 119.39 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 24 | 5 |
| 882 | 119.40 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 915 | 119.53 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 948 | 119.67 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 22 | 7 |
| 956 | 119.70 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 983 | 119.79 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 17 | 14 |