BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0699500 Os06g0699500|AK062047
         (115 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57170.2  | chr5:23162426-23163140 REVERSE LENGTH=117          131   7e-32
AT5G01650.2  | chr5:243067-244033 REVERSE LENGTH=123              119   3e-28
AT3G51660.1  | chr3:19164229-19165076 REVERSE LENGTH=113           77   2e-15

>AT5G57170.2 | chr5:23162426-23163140 REVERSE LENGTH=117
          Length = 116

 Score =  131 bits (330), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 61/102 (59%), Positives = 79/102 (77%)

Query: 1   MPQLSLTTNVPXXXXXXXXXXKDCSKALARIIGKPESYVMVSISGSVPMSFAASEEPAAY 60
           MP L+L TN+P          KD +KA+A+IIGKPESYVM+ ++  VP++FA +EEPAAY
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPESYVMILLNSGVPIAFAGTEEPAAY 60

Query: 61  GELMSIGGIGPGVNGKLSAALAEILETKLSVSRSRFYVKFDD 102
           GEL+SIGG+GPGVNGKLS  ++EIL+ KLS+  SRFY+KF D
Sbjct: 61  GELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFYIKFYD 102



>AT5G01650.2 | chr5:243067-244033 REVERSE LENGTH=123
          Length = 122

 Score =  119 bits (298), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 59/104 (56%), Positives = 76/104 (73%)

Query: 1   MPQLSLTTNVPXXXXXXXXXXKDCSKALARIIGKPESYVMVSISGSVPMSFAASEEPAAY 60
           MP L+L+TNV            + S  +A+IIGKPE+YVM+ + GSVPMSF  +E+PAAY
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPENYVMIVLKGSVPMSFGGTEDPAAY 60

Query: 61  GELMSIGGIGPGVNGKLSAALAEILETKLSVSRSRFYVKFDDVK 104
           GEL+SIGG+   VN KLSAA++ ILETKLSV +SRF++KF D K
Sbjct: 61  GELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKFYDTK 104



>AT3G51660.1 | chr3:19164229-19165076 REVERSE LENGTH=113
          Length = 112

 Score = 76.6 bits (187), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 61/108 (56%)

Query: 1   MPQLSLTTNVPXXXXXXXXXXKDCSKALARIIGKPESYVMVSISGSVPMSFAASEEPAAY 60
           MP L +TTNV            + +KA+A I+G+P++ VMV + GSV + F  ++E AAY
Sbjct: 1   MPCLYITTNVNFDGVNTDPFYSEVTKAVASIVGRPQNLVMVVLKGSVEIVFGGNKEAAAY 60

Query: 61  GELMSIGGIGPGVNGKLSAALAEILETKLSVSRSRFYVKFDDVKGFNL 108
            E++S+GGI   V  +L A +  IL T  S+  +RF  K  D+    L
Sbjct: 61  AEIVSMGGITKQVKRELIATVGSILHTHFSIHPTRFIFKVFDINSLPL 108



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.315    0.133    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,045,156
Number of extensions: 66936
Number of successful extensions: 175
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 175
Number of HSP's successfully gapped: 3
Length of query: 115
Length of database: 11,106,569
Length adjustment: 84
Effective length of query: 31
Effective length of database: 8,803,625
Effective search space: 272912375
Effective search space used: 272912375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 104 (44.7 bits)