Os06g0691600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EF-Hand type domain containing protein.
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Os06g0691600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EF-Hand type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.78 | 0.335 | 14.1 | -0.828 | 0.541 | -1.7 | -0.377 | 0.528 | 0.0979 | 0.859 | 19.58 | 4932 | -- | -- |
| 50.86 | 0.332 | 14.1 | -0.809 | 0.549 | -1.86 | -0.396 | -- | 0.0912 | 0.838 | 19.4 | 4830 | -- | -- |
| 51.26 | 0.333 | 14.1 | -0.816 | 0.533 | -1.89 | -- | 0.291 | 0.106 | 0.805 | 19.39 | 5255 | -- | -- |
| 51.27 | 0.334 | 14.1 | -0.811 | 0.535 | -2.03 | -- | -- | 0.108 | 0.809 | 19.25 | 5255 | -- | -- |
| 66.11 | 0.379 | 14.2 | -0.822 | -- | -1.33 | -- | 1.27 | 0.0255 | -- | 21.62 | 2449 | -- | -- |
| 82 | 0.425 | 14.1 | -0.0203 | 0.565 | -- | -0.434 | -- | 0.37 | 0.882 | -- | -- | -- | -- |
| 82.8 | 0.426 | 14.1 | -0.00437 | 0.566 | -- | -- | -- | 0.373 | 0.869 | -- | -- | -- | -- |
| 67.44 | 0.382 | 14.1 | -0.654 | -- | -1.8 | -- | -- | 0.118 | -- | 20.07 | 2446 | -- | -- |
| 60.62 | 0.363 | 14.1 | -- | 0.499 | -1.38 | -- | -- | 0.264 | 0.626 | 19.11 | 2516 | -- | -- |
| 102.77 | 0.474 | 14.1 | 0.0165 | -- | -- | -- | -- | 0.383 | -- | -- | -- | -- | -- |
| 82.8 | 0.426 | 14.1 | -- | 0.566 | -- | -- | -- | 0.373 | 0.869 | -- | -- | -- | -- |
| 69.87 | 0.389 | 14.1 | -- | -- | -1.55 | -- | -- | 0.198 | -- | 22.5 | 976 | -- | -- |
| 102.78 | 0.473 | 14.1 | -- | -- | -- | -- | -- | 0.381 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.01 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 2 | 45.03 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 8 |
| 3 | 45.06 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 4 | 45.06 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 9 | 45.30 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 11 | 45.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 12 | 45.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 17 | 45.41 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 32 | 45.82 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 43 | 46.05 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 50 | 46.15 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 5 |
| 88 | 46.92 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 105 | 47.12 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 124 | 47.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 146 | 47.53 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 151 | 47.57 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 152 | 47.57 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 160 | 47.63 | wind | 3.0 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 173 | 47.67 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 182 | 47.70 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 186 | 47.71 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 201 | 47.78 | wind | 1.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 205 | 47.79 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 208 | 47.80 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 14 |
| 217 | 47.85 | wind | 9.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 238 | 47.95 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 14 |
| 243 | 47.97 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 270 | 48.04 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 319 | 48.18 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 320 | 48.19 | wind | 3.0 | 43200 | > th | dose independent | rect. | 24 | 3 |
| 335 | 48.24 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 343 | 48.26 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 352 | 48.28 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 393 | 48.41 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 427 | 48.49 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 431 | 48.50 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 436 | 48.50 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 459 | 48.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 461 | 48.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 465 | 48.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 467 | 48.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 502 | 48.66 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 515 | 48.69 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 550 | 48.78 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 590 | 48.86 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 16 |
| 650 | 48.96 | wind | 9.0 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 652 | 48.97 | wind | 9.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 668 | 48.99 | wind | 9.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 681 | 49.01 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 718 | 49.08 | wind | 9.0 | 43200 | < th | dose independent | rect. | 22 | 15 |
| 723 | 49.09 | wind | 9.0 | 43200 | < th | dose independent | rect. | 21 | 17 |
| 740 | 49.12 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 749 | 49.13 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 772 | 49.18 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 777 | 49.18 | wind | 9.0 | 43200 | < th | dose independent | rect. | 2 | 11 |
| 809 | 49.22 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 22 | 15 |
| 811 | 49.23 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 815 | 49.23 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 21 | 17 |
| 818 | 49.23 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 20 |
| 826 | 49.25 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 828 | 49.25 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 864 | 49.32 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 871 | 49.32 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 3 | 10 |
| 881 | 49.33 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 21 |
| 950 | 49.42 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 960 | 49.44 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 993 | 49.49 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |