BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0691600 Os06g0691600|AK070430
(170 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05990.1 | chr1:1818588-1819040 FORWARD LENGTH=151 61 3e-10
AT3G10190.1 | chr3:3155309-3155938 FORWARD LENGTH=210 59 9e-10
AT1G73630.1 | chr1:27684748-27685239 FORWARD LENGTH=164 58 2e-09
AT1G24620.1 | chr1:8723893-8724453 REVERSE LENGTH=187 58 2e-09
AT1G66400.1 | chr1:24770856-24771329 REVERSE LENGTH=158 55 1e-08
AT4G03290.1 | chr4:1442813-1443277 FORWARD LENGTH=155 55 2e-08
AT2G41410.1 | chr2:17262085-17262735 REVERSE LENGTH=217 54 5e-08
AT1G18210.1 | chr1:6268273-6268785 REVERSE LENGTH=171 54 5e-08
AT5G21274.1 | chr5:7214740-7215950 REVERSE LENGTH=150 51 3e-07
AT3G56800.1 | chr3:21034981-21035920 REVERSE LENGTH=150 50 5e-07
AT2G27030.3 | chr2:11532069-11534176 FORWARD LENGTH=182 50 5e-07
AT3G43810.1 | chr3:15664619-15666355 REVERSE LENGTH=150 50 6e-07
>AT1G05990.1 | chr1:1818588-1819040 FORWARD LENGTH=151
Length = 150
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 30 SSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVXXXXXXXXXXXXGKLSVEELL 89
+ L FQ FD + DG +T EL L SLG+ P+ E+ G + ++E
Sbjct: 4 TELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFG 63
Query: 90 DVMNXXXXXXXXXXXXXXSAVPALESAAGPDGVLGADELARLLSVMG---TASVEDCMEI 146
++ A + DG + DEL +LS +G +++DC ++
Sbjct: 64 ELYKTIMDEEDEEEEDMKEAFNVFDQNG--DGFITVDELKAVLSSLGLKQGKTLDDCKKM 121
Query: 147 IACMDGDGDGAISVEEFRLMAQ 168
I +D DGDG ++ +EFR M +
Sbjct: 122 IKKVDVDGDGRVNYKEFRQMMK 143
>AT3G10190.1 | chr3:3155309-3155938 FORWARD LENGTH=210
Length = 209
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 27 SYISSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDK-PEHEVXXXXXXXXXXXXGKLSV 85
SY+ +++AF+ D DNDG V+ +L LL+ LG D E E+ G + +
Sbjct: 67 SYVE-ILQAFKLIDRDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKEVDCDGDGTIRL 125
Query: 86 EELLDVMNXXXXXXXXXXXXXXSAVPALESA----------AGPDGVLGADELARLLSVM 135
EEL S PA +S A DG++ ADEL R+ S +
Sbjct: 126 EEL--------------ASRVVSLDPARDSTELKETFEFFDADRDGLISADELLRVFSTI 171
Query: 136 G--TASVEDCMEIIACMDGDGDGAISVEEFRLMAQL 169
G +++DC +IA +D DGDG + EF M L
Sbjct: 172 GDERCTLDDCKRMIADVDEDGDGFVCFTEFSRMMDL 207
>AT1G73630.1 | chr1:27684748-27685239 FORWARD LENGTH=164
Length = 163
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 32 LVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVXXXXXXXXXXXXGKLSVEELLDV 91
L + F FD++ DG ++ EL + S+G E E+ G ++ EE +
Sbjct: 21 LKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFATI 80
Query: 92 MNXXXXXXXXXXXXXXSAVPALESA----AGPDGVLGADELARLLSVMG-TASVEDCMEI 146
SAV E+ +G++ + E+ ++L+ +G T SVEDC+ +
Sbjct: 81 C-----------RSSSSAVEIREAFDLYDQNKNGLISSSEIHKVLNRLGMTCSVEDCVRM 129
Query: 147 IACMDGDGDGAISVEEFRLM 166
I +D DGDG ++ EEF+ M
Sbjct: 130 IGHVDTDGDGNVNFEEFQKM 149
>AT1G24620.1 | chr1:8723893-8724453 REVERSE LENGTH=187
Length = 186
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 ISSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVXXXXXXXXXXXXGKLSVEEL 88
I L F+ FD + DG +++ EL ++ SLG + PE E+ G ++ EE
Sbjct: 35 IRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEF 94
Query: 89 LDVMNXXXXXXXXXXXXXXSAVPALESAAGPDGVLGADELARLLSVMG-TASVEDCMEII 147
++ +N A + +G + A+EL +L +G S+ +C ++I
Sbjct: 95 VE-LNTKGMDQNDVLENLKDAFSVYDIDG--NGSISAEELHEVLRSLGDECSIAECRKMI 151
Query: 148 ACMDGDGDGAISVEEFRLM 166
+D DGDG I EEF++M
Sbjct: 152 GGVDKDGDGTIDFEEFKIM 170
>AT1G66400.1 | chr1:24770856-24771329 REVERSE LENGTH=158
Length = 157
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 20 SVDFEALSYISSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVXXXXXXXXXXX 79
+V L + + + FQ FD +NDG ++ EL+ ++ +L + + E
Sbjct: 4 NVSRNCLGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDG 63
Query: 80 XGKLSVEELLDVMNXXXXXXXXXXXXXXSAVPALESAAG-----PDGVLGADELARLLSV 134
G + ++E + + SA+ L+ A +G + A+EL ++
Sbjct: 64 NGFIDLDEFVALF------QISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKN 117
Query: 135 MG-TASVEDCMEIIACMDGDGDGAISVEEFRLM 166
+G S++DC +I +D DGDG + EEF+ M
Sbjct: 118 LGEKCSIQDCQRMINKVDSDGDGCVDFEEFKKM 150
>AT4G03290.1 | chr4:1442813-1443277 FORWARD LENGTH=155
Length = 154
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 3/142 (2%)
Query: 30 SSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVXXXXXXXXXXXXGKLSVEELL 89
+ L FQ FD D DG +T EL +LG+ PE E+ G + +EE
Sbjct: 4 TELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEEFG 63
Query: 90 DVMNXXXXXXXXXXXXXXSAVPALESAAGPDGVLGADELARLLSVMGT---ASVEDCMEI 146
++ DG + DEL +LS +G ++E+C ++
Sbjct: 64 ELYKTIMVEDEDEVGEEDMKEAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEECRKM 123
Query: 147 IACMDGDGDGAISVEEFRLMAQ 168
I +D DGDG ++ EFR M +
Sbjct: 124 IMQVDVDGDGRVNYMEFRQMMK 145
>AT2G41410.1 | chr2:17262085-17262735 REVERSE LENGTH=217
Length = 216
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 28 YISSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKP-EHEVXXXXXXXXXXXXGKLSVE 86
+ + LV+AF+ D D+DG+V+ +L L++ L + P + EV G +S+E
Sbjct: 67 FYTELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGGDGGCISLE 126
Query: 87 ELLDVMNXXXXXXXXXXXXXXSAVPALESAAGPDGVLGADELARLLSVMG--TASVEDCM 144
+L + + +G + A+EL R+ V+G ++E+CM
Sbjct: 127 DLASRVAGTSGEGSVETEELREVFEIFD--VDRNGKISAEELHRVFGVIGDERCTLEECM 184
Query: 145 EIIACMDGDGDGAISVEEF-RLM 166
+IA +DG+GDG + ++F R+M
Sbjct: 185 RMIATVDGNGDGFVCFDDFCRMM 207
>AT1G18210.1 | chr1:6268273-6268785 REVERSE LENGTH=171
Length = 170
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 32 LVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVXXXXXXXXXXXXGKLSVEELLDV 91
L + F FDS+ DG ++ EL G+ ++G E E+ G ++++E +
Sbjct: 24 LKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFSTL 83
Query: 92 MNXXXXXXXXXXXXXXSAVPALESA-----AGPDGVLGADELARLLSVMG-TASVEDCME 145
S+ + A +G++ A EL ++L+ +G + SVEDC
Sbjct: 84 CRSS------------SSAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTR 131
Query: 146 IIACMDGDGDGAISVEEFRLM 166
+I +D DGDG ++ EEF+ M
Sbjct: 132 MIGPVDADGDGNVNFEEFQKM 152
>AT5G21274.1 | chr5:7214740-7215950 REVERSE LENGTH=150
Length = 149
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Query: 29 ISSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVXXXXXXXXXXXXGKLSVEEL 88
IS EAF FD D DG +T EL ++ SLG + E E+ G + E
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 89 LDVMNXXXXXXXXXXXXXXSAVPALESAAGPDGVLGADELARLLSVMGTA-SVEDCMEII 147
L++M A + +G + A EL +++ +G S E+ E+I
Sbjct: 70 LNLM-ARKMKDTDSEEELKEAFRVFDK--DQNGFISAAELRHVMTNLGEKLSDEEVDEMI 126
Query: 148 ACMDGDGDGAISVEEF 163
D DGDG I+ EEF
Sbjct: 127 READVDGDGQINYEEF 142
>AT3G56800.1 | chr3:21034981-21035920 REVERSE LENGTH=150
Length = 149
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Query: 29 ISSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVXXXXXXXXXXXXGKLSVEEL 88
IS EAF FD D DG +T EL ++ SLG + E E+ G + E
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 89 LDVMNXXXXXXXXXXXXXXSAVPALESAAGPDGVLGADELARLLSVMGTA-SVEDCMEII 147
L++M A + +G + A EL +++ +G + E+ E+I
Sbjct: 70 LNLM-ARKMKDTDSEEELKEAFRVFDK--DQNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 148 ACMDGDGDGAISVEEF 163
D DGDG I+ EEF
Sbjct: 127 KEADVDGDGQINYEEF 142
>AT2G27030.3 | chr2:11532069-11534176 FORWARD LENGTH=182
Length = 181
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Query: 29 ISSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVXXXXXXXXXXXXGKLSVEEL 88
IS EAF FD D DG +T EL ++ SLG + E E+ G + E
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 89 LDVMNXXXXXXXXXXXXXXSAVPALESAAGPDGVLGADELARLLSVMGTA-SVEDCMEII 147
L++M A + +G + A EL +++ +G + E+ E+I
Sbjct: 70 LNLM-ARKMKDTDSEEELKEAFRVFDK--DQNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 148 ACMDGDGDGAISVEEF 163
D DGDG I+ EEF
Sbjct: 127 KEADVDGDGQINYEEF 142
>AT3G43810.1 | chr3:15664619-15666355 REVERSE LENGTH=150
Length = 149
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Query: 29 ISSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVXXXXXXXXXXXXGKLSVEEL 88
IS EAF FD D DG +T EL ++ SLG + E E+ G + E
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 89 LDVMNXXXXXXXXXXXXXXSAVPALESAAGPDGVLGADELARLLSVMGTA-SVEDCMEII 147
L++M A + +G + A EL +++ +G + E+ E+I
Sbjct: 70 LNLM-ARKMKDTDSEEELKEAFRVFDK--DQNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 148 ACMDGDGDGAISVEEF 163
D DGDG I+ EEF
Sbjct: 127 READVDGDGQINYEEF 142
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.134 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,500,710
Number of extensions: 76979
Number of successful extensions: 530
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 497
Number of HSP's successfully gapped: 14
Length of query: 170
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 79
Effective length of database: 8,611,713
Effective search space: 680325327
Effective search space used: 680325327
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 108 (46.2 bits)