Os06g0687600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF579, plant family protein.
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Os06g0687600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF579, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.22 | 0.613 | 11 | -1.95 | 2.47 | -1.25 | 0.716 | -1.47 | -1.24 | 7.97 | 62.63 | 1004 | -- | -- |
| 173.09 | 0.613 | 11 | -2.08 | 2.47 | -1.3 | 0.279 | -- | -1.26 | 7.98 | 62 | 1004 | -- | -- |
| 171.45 | 0.61 | 11 | -1.97 | 2.47 | -1.25 | -- | -1.08 | -1.25 | 7.97 | 63.49 | 1008 | -- | -- |
| 173.32 | 0.613 | 11 | -2.08 | 2.48 | -1.3 | -- | -- | -1.26 | 7.99 | 62 | 1004 | -- | -- |
| 432.94 | 0.969 | 11 | -1.87 | -- | -0.735 | -- | -1.17 | -1.26 | -- | 60.92 | 2845 | -- | -- |
| 199.8 | 0.663 | 11 | -2.05 | 2.16 | -- | 0.181 | -- | -1.17 | 7.44 | -- | -- | -- | -- |
| 199.89 | 0.662 | 11 | -2.05 | 2.16 | -- | -- | -- | -1.17 | 7.44 | -- | -- | -- | -- |
| 433.06 | 0.969 | 11.1 | -1.98 | -- | -0.929 | -- | -- | -1.32 | -- | 64.98 | 2846 | -- | -- |
| 274.82 | 0.772 | 10.9 | -- | 2.37 | -1.63 | -- | -- | -1.19 | 8.34 | 82 | 1023 | -- | -- |
| 448.29 | 0.989 | 11 | -2.01 | -- | -- | -- | -- | -1.14 | -- | -- | -- | -- | -- |
| 310.44 | 0.824 | 10.9 | -- | 2.14 | -- | -- | -- | -0.946 | 7.51 | -- | -- | -- | -- |
| 522.75 | 1.06 | 11.1 | -- | -- | -1.31 | -- | -- | -1.41 | -- | 75.2 | 7151 | -- | -- |
| 555.28 | 1.1 | 11 | -- | -- | -- | -- | -- | -0.916 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.24 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 2 | 165.44 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 4 | 165.99 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 9 | 166.87 | humidity | 7e+01 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 12 | 167.21 | humidity | 7e+01 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 20 | 167.63 | humidity | 7e+01 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 40 | 169.25 | wind | 1e+00 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 42 | 169.27 | humidity | 9e+01 | 720 | > th | dose dependent | rect. | 6 | 20 |
| 45 | 169.35 | humidity | 9e+01 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 54 | 169.59 | humidity | 9e+01 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 62 | 169.73 | radiation | 1e+00 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 67 | 169.79 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 68 | 169.79 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 74 | 169.99 | precipitation | 1e-01 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 78 | 170.08 | humidity | 8e+01 | 1440 | > th | dose independent | sin | 23 | NA |
| 86 | 170.18 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 13 | 3 |
| 94 | 170.26 | humidity | 7e+01 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 97 | 170.29 | humidity | 7e+01 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 99 | 170.30 | humidity | 7e+01 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 101 | 170.31 | humidity | 7e+01 | 1440 | > th | dose independent | rect. | 11 | 16 |
| 109 | 170.39 | humidity | 8e+01 | 1440 | < th | dose independent | sin | 0 | NA |
| 160 | 171.05 | humidity | 9e+01 | 720 | > th | dose dependent | rect. | 13 | 13 |
| 199 | 171.31 | humidity | 9e+01 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 229 | 171.50 | wind | 1e+00 | 43200 | > th | dose independent | rect. | 24 | 5 |
| 280 | 171.78 | wind | 1e+00 | 43200 | < th | dose independent | rect. | 24 | 5 |
| 294 | 171.88 | humidity | 8e+01 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 299 | 171.91 | radiation | 1e+01 | 30 | > th | dose independent | sin | 1 | NA |
| 327 | 172.07 | humidity | 9e+01 | 720 | > th | dose dependent | sin | 21 | NA |
| 331 | 172.09 | humidity | 7e+01 | 1440 | > th | dose dependent | rect. | 9 | 12 |
| 384 | 172.39 | wind | 1e+00 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 416 | 172.54 | atmosphere | 1e+03 | 270 | > th | dose independent | rect. | 11 | 21 |
| 423 | 172.58 | wind | 1e+00 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 431 | 172.63 | radiation | 1e+01 | 30 | > th | dose independent | rect. | 6 | 9 |
| 451 | 172.66 | humidity | 7e+01 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 464 | 172.70 | humidity | 6e+01 | 1440 | > th | dose dependent | rect. | 9 | 20 |
| 484 | 172.72 | wind | 1e+00 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 487 | 172.72 | humidity | 9e+01 | 720 | > th | dose dependent | sin | 18 | NA |
| 490 | 172.73 | wind | 1e+00 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 500 | 172.75 | atmosphere | 1e+03 | 30 | > th | dose independent | rect. | 13 | 19 |
| 525 | 172.83 | humidity | 7e+01 | 1440 | > th | dose independent | rect. | 23 | 20 |
| 552 | 172.92 | humidity | 7e+01 | 1440 | > th | dose dependent | sin | 23 | NA |
| 562 | 172.94 | humidity | 7e+01 | 1440 | > th | dose dependent | rect. | 9 | 15 |
| 605 | 173.09 | wind | 1e+00 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 619 | 173.11 | humidity | 7e+01 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 682 | 173.16 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 4 | 13 |
| 695 | 173.18 | humidity | 7e+01 | 1440 | > th | dose independent | no | NA | NA |
| 723 | 173.22 | humidity | 9e+01 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 730 | 173.23 | precipitation | 1e-01 | 1440 | > th | dose independent | rect. | 4 | 11 |
| 766 | 173.32 | precipitation | 1e-01 | 1440 | < th | dose independent | rect. | 4 | 11 |
| 768 | 173.32 | precipitation | 1e-01 | 1440 | < th | dose dependent | rect. | 4 | 11 |
| 774 | 173.35 | humidity | 8e+01 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 857 | 173.60 | radiation | 1e+00 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 874 | 173.65 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 876 | 173.65 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 890 | 173.69 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 894 | 173.70 | humidity | 6e+01 | 1440 | > th | dose dependent | rect. | 23 | 22 |
| 913 | 173.75 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 914 | 173.75 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 22 | 19 |
| 916 | 173.78 | humidity | 9e+01 | 720 | > th | dose independent | rect. | 20 | 5 |
| 923 | 173.79 | humidity | 6e+01 | 1440 | > th | dose dependent | rect. | 1 | 20 |