BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0687600 Os06g0687600|Os06g0687600
(336 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G67210.1 | chr5:26819019-26819972 FORWARD LENGTH=318 234 4e-62
AT3G50220.1 | chr3:18617672-18618640 REVERSE LENGTH=323 228 4e-60
AT2G15440.1 | chr2:6743792-6744781 REVERSE LENGTH=330 206 2e-53
AT1G71690.1 | chr1:26947806-26949064 FORWARD LENGTH=296 176 2e-44
AT1G33800.1 | chr1:12261480-12262456 FORWARD LENGTH=298 173 1e-43
AT1G09610.1 | chr1:3111789-3112637 FORWARD LENGTH=283 172 3e-43
AT4G09990.1 | chr4:6259110-6260064 REVERSE LENGTH=291 163 1e-40
AT1G67330.1 | chr1:25214118-25214993 FORWARD LENGTH=292 144 6e-35
AT1G27930.1 | chr1:9731510-9732379 REVERSE LENGTH=290 143 1e-34
AT4G24910.1 | chr4:12817954-12818901 REVERSE LENGTH=316 110 2e-24
>AT5G67210.1 | chr5:26819019-26819972 FORWARD LENGTH=318
Length = 317
Score = 234 bits (597), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 164/326 (50%), Gaps = 25/326 (7%)
Query: 3 GLSGPKLLVVHPSSNKPLGGAASPAMAVLGSRRRMWVVLFLAGFACVSLGTMLCAARDHX 62
G + KL++VHP K S R+W++ F++ F L T+L
Sbjct: 5 GNTNTKLILVHPYIQKQ------------TSTNRLWLLAFVSFFTIAFLLTLLYTT---- 48
Query: 63 XXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXLPGYVFDALVQYASAGGNSTASMPGG 122
LP +A++ YAS +S G
Sbjct: 49 ------DSIISSKNNSATVSSAVNSAVTTATISQLPTTAINAMLHYASRSNDSYHMSYGE 102
Query: 123 DXXXXXXXXXXXXPCNFLVFGLGGETPLWRALNHGGRTVFLDENQYYVSHLEGRHPGLEA 182
PCN LVFGL ET LW++LNH GRTVF++EN+YY ++ E HP +E
Sbjct: 103 MKSISDVLRRCSPPCNLLVFGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIEV 162
Query: 183 YDVVYTTTVREFPXXXXXXXXXXSAECRPVQNLLYSDCRLAINDLPNQLYDVAWDIILVD 242
+DV YTT RE ECRPVQNLL+SDC+L +NDLPN +YDV WD+ILVD
Sbjct: 163 FDVQYTTKAREARELVSAVKEAARNECRPVQNLLFSDCKLGLNDLPNHVYDVDWDVILVD 222
Query: 243 GPRGYTAASPGRMSAIFTAGVMARSRAEKGAETDVLVHDYEREVERACSREFLCEENRVE 302
GPRG PGRMS+IFTA V+ARS+ +T V VHDY R+VER C EFLC EN VE
Sbjct: 223 GPRGDGGDVPGRMSSIFTAAVLARSKKGGNPKTHVFVHDYYRDVERLCGDEFLCRENLVE 282
Query: 303 ETSTRSLAHFVVPGGRDLRRETFCAG 328
S LAH+V+ D FC G
Sbjct: 283 --SNDLLAHYVLE-KMDKNSTQFCRG 305
>AT3G50220.1 | chr3:18617672-18618640 REVERSE LENGTH=323
Length = 322
Score = 228 bits (581), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/334 (39%), Positives = 167/334 (50%), Gaps = 19/334 (5%)
Query: 3 GLSGPKLLVVHPSSNKPLGGAASPAMAVLGSRRRMWVVLFLAGFACVSLGTMLCAARDHX 62
G + KL+++HP K S R+W++ F++ F V L T+L RD
Sbjct: 6 GNTNTKLILLHPYIQKQ------------TSTTRLWLLAFVSFFTIVFLLTLL-YTRD-- 50
Query: 63 XXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXLPGYVFDALVQYASAGGNSTASMPGG 122
LP +AL+ YAS +S G
Sbjct: 51 -TIPSKNTSVAAAVAAVVTGGSTPSASSPISNSNLPTSAINALLHYASRSNDSFHMSYGE 109
Query: 123 DXXXXXXXXXXXXPCNFLVFGLGGETPLWRALNHGGRTVFLDENQYYVSHLEGRHPGLEA 182
PCN LVFGL ET LW++LNH GRTVF++EN+YY ++ E HP ++
Sbjct: 110 MKSISDVLRRCAPPCNLLVFGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIDV 169
Query: 183 YDVVYTTTVREFPXXXXXXXXXXSAECRPVQNLLYSDCRLAINDLPNQLYDVAWDIILVD 242
+DV YTT E ECRPVQNLL+SDC+L +NDLPN +YDV WD+I VD
Sbjct: 170 FDVQYTTKAHEAGELVTAAKEAAGNECRPVQNLLFSDCKLGLNDLPNHVYDVDWDVIFVD 229
Query: 243 GPRGYTAASPGRMSAIFTAGVMARSRAEKGAETDVLVHDYEREVERACSREFLCEENRVE 302
GPRG PGRMS+IFTA V+ARS+ +T V VHDY R+VER C EFLC EN VE
Sbjct: 230 GPRGDAHEGPGRMSSIFTAAVLARSKKGGTPKTHVFVHDYYRDVERLCGDEFLCRENLVE 289
Query: 303 ETSTRSLAHFVVPGGRDLRRETFCAGGGGSGAST 336
S LAH+V+ D FC G S+
Sbjct: 290 --SNDLLAHYVL-DKMDKNSTKFCNGRKKRSVSS 320
>AT2G15440.1 | chr2:6743792-6744781 REVERSE LENGTH=330
Length = 329
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 146/231 (63%), Gaps = 10/231 (4%)
Query: 101 VFDALVQYASAGGNSTASMPGGDXXXXXXXXXXXXP-CNFLVFGLGGETPLWRALNHGGR 159
V AL+ Y S+ +T SM + P CN L+FGL E+ LWR++N GR
Sbjct: 78 VLAALLHYTSSSPPNT-SMSFLELSTISNIIHSHGPACNLLIFGLTHESLLWRSINFQGR 136
Query: 160 TVFLDENQYYVSHLEGRHPGLEAYDVVYTTTVREFPXXXXXXXXXXSAECRPVQNLLYSD 219
TVF+DE+ Y VS E +PG+EAY+VVY+T V + ECRPVQNLL+SD
Sbjct: 137 TVFVDESPYSVSKFEQSNPGVEAYEVVYSTKVSQ--AKKLLGYYKTRPECRPVQNLLFSD 194
Query: 220 CRLAINDLPNQLYDVAWDIILVDGPRGYTAASPGRMSAIFTAGVMARSR--AEKGAETDV 277
C+L INDLPN +Y++ WD+IL+DGPRGY + SPGRM+ IFT+ V+A+S+ K +TDV
Sbjct: 195 CKLGINDLPNFVYEIDWDVILIDGPRGYASDSPGRMAPIFTSAVLAKSKDFGTKTKKTDV 254
Query: 278 LVHDYEREVERACSREFLCEENRVEETSTRSLAHFVVPGGRDLRRETFCAG 328
LVH++ R++ER S EFLCEEN +E L HFVV + RE++ G
Sbjct: 255 LVHEFGRKIERVYSEEFLCEENLIEVVG--DLGHFVVAAAEE--RESYGDG 301
>AT1G71690.1 | chr1:26947806-26949064 FORWARD LENGTH=296
Length = 295
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 127/224 (56%), Gaps = 7/224 (3%)
Query: 97 LPGYVFDALVQYASAGGNSTASMPGGDXXXXXXXXXXXXPCNFLVFGLGGETPLWRALNH 156
+P + DALV YAS+ N T + PCNFLVFGLG ++ +W LNH
Sbjct: 68 IPPSLADALVHYASS--NVTPQQTLSEISVTKKELEKKSPCNFLVFGLGHDSLMWATLNH 125
Query: 157 GGRTVFLDENQYYVSHLEGRHPGLEAYDVVYTTTVREFPXXXXXXXXXXSAECRPVQ-NL 215
GGRT+FLDE++ ++ + + P LE+Y V Y T VR+ ECR V +L
Sbjct: 126 GGRTIFLDEDESWIHQIAEKFPSLESYHVRYKTKVRD--AEALMAATKDREECRRVSTDL 183
Query: 216 LYSDCRLAINDLPNQLYDVAWDIILVDGPRGYTAASPGRMSAIFTAGVMARSRAEKGAET 275
S C LA+ LP +Y+ WD+I+VD P G+ +PGRMSAI+TAG++AR R ++ T
Sbjct: 184 RVSTCELALKGLPEVVYETEWDLIMVDAPTGFHEEAPGRMSAIYTAGMIARRRKDEEETT 243
Query: 276 DVLVHDYEREVERACSREFLCEENRVEETSTRSLAHFVVPGGRD 319
V VHD +R+VE S EFLC + ++ L HF VP R+
Sbjct: 244 AVFVHDVDRKVEDEFSMEFLCRDYMTKQEG--RLRHFTVPSHRN 285
>AT1G33800.1 | chr1:12261480-12262456 FORWARD LENGTH=298
Length = 297
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 128/230 (55%), Gaps = 9/230 (3%)
Query: 97 LPGYVFDALVQYASAGGNSTASMPGGDXXXXXXXXXXXXPCNFLVFGLGGETPLWRALNH 156
+P + DALV Y ++ N T + PCNFLVFGLG ++ +W +LNH
Sbjct: 69 MPLSLSDALVHYVTS--NVTPQQTFDEVSVSKRVLDKKSPCNFLVFGLGHDSLMWASLNH 126
Query: 157 GGRTVFLDENQYYVSHLEGRHPGLEAYDVVYTTTVREFPXXXXXXXXXXSAECRPVQNLL 216
GGRT+F++E+Q +++ + + P LE+Y VVY T V++ S ECR V +
Sbjct: 127 GGRTLFIEEDQAWIAIVTKKFPNLESYHVVYDTKVKD---SDKLMELGRSEECRSVSDPR 183
Query: 217 YSDCRLAINDLPNQLYDVAWDIILVDGPRGYTAASPGRMSAIFTAGVMARSRAEKGAETD 276
S C LA+ D P Y+ WD+I+VD P GY +PGRMSAI+TAG++AR+R + ETD
Sbjct: 184 NSKCDLALKDFPADFYETKWDLIMVDAPTGYHEEAPGRMSAIYTAGLLARNRED--GETD 241
Query: 277 VLVHDYEREVERACSREFLCEENRVEETSTRSLAHFVVPGGRDLRRETFC 326
V VHD R VE S FLC+ E+ L HF +P R FC
Sbjct: 242 VFVHDVNRPVEDEFSATFLCKGYMREQNG--RLRHFTIPSHRARAGRPFC 289
>AT1G09610.1 | chr1:3111789-3112637 FORWARD LENGTH=283
Length = 282
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 132/223 (59%), Gaps = 8/223 (3%)
Query: 97 LPGYVFDALVQYASAGGNSTASMPGGDXXXXXXXXXXXXPCNFLVFGLGGETPLWRALNH 156
LP + AL+ Y+++ ++ + PCNFLVFGLG ++ +W +LN+
Sbjct: 56 LPRSLAQALIHYSTSVITPQQTL--KEIAVSSRVLGKKSPCNFLVFGLGHDSLMWSSLNY 113
Query: 157 GGRTVFLDENQYYVSHLEGRHPGLEAYDVVYTTTVREFPXXXXXXXXXXSAECRPVQNLL 216
GGRTVFL+E++ ++ ++ R P LE+Y V Y + V + EC + +
Sbjct: 114 GGRTVFLEEDEAWIKQIKRRFPMLESYHVTYDSKVNQ---ADNLIEVGKGPECTAIGDPR 170
Query: 217 YSDCRLAINDLPNQLYDVAWDIILVDGPRGYTAASPGRMSAIFTAGVMARSRAEKGAETD 276
YS C+LA+ LP ++Y+ WD+I+VD P GY +PGRM+AI+TAG+MAR+R ++G ETD
Sbjct: 171 YSMCQLALKGLPAEIYETGWDLIMVDAPTGYYDEAPGRMTAIYTAGMMARNR-KQGGETD 229
Query: 277 VLVHDYEREVERACSREFLCEENRVEETSTRSLAHFVVPGGRD 319
V VHD RE+E S+ FLCE ++ L HF++P RD
Sbjct: 230 VFVHDVNREIEDKFSKAFLCEGYMKKQEG--RLRHFIIPSYRD 270
>AT4G09990.1 | chr4:6259110-6260064 REVERSE LENGTH=291
Length = 290
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 126/230 (54%), Gaps = 8/230 (3%)
Query: 97 LPGYVFDALVQYASAGGNSTASMPGGDXXXXXXXXXXXXPCNFLVFGLGGETPLWRALNH 156
LP + DALV Y ++ T + PCNFLVFGLG ++ +W +LNH
Sbjct: 61 LPTSLSDALVHYVTS--EITPQQTFDEVSVSKRVLDKKSPCNFLVFGLGHDSLMWASLNH 118
Query: 157 GGRTVFLDENQYYVSHLEGRHPGLEAYDVVYTTTVREFPXXXXXXXXXXSAECRPVQNLL 216
GGRT+FL+E++ ++ + + P LE+Y VVY T V++ + +C+ V +
Sbjct: 119 GGRTLFLEEDEAWIETVTKKFPNLESYHVVYDTKVKD---SNKLMELKRTEDCKAVSDPR 175
Query: 217 YSDCRLAINDLPNQLYDVAWDIILVDGPRGYTAASPGRMSAIFTAGVMARSRAEKGAETD 276
S C L++ P +Y+ WD+I+VD P GY +PGRMSAI+TAG++AR+R + G ETD
Sbjct: 176 DSKCALSLKGFPADVYETQWDVIMVDAPTGYHDEAPGRMSAIYTAGLLARNRYD-GGETD 234
Query: 277 VLVHDYEREVERACSREFLCEENRVEETSTRSLAHFVVPGGRDLRRETFC 326
V VHD R VE S FLC E+ L HF +P R FC
Sbjct: 235 VFVHDINRPVEDEFSVAFLCGGYMKEQQG--RLRHFNIPSHRASFGTPFC 282
>AT1G67330.1 | chr1:25214118-25214993 FORWARD LENGTH=292
Length = 291
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 111/188 (59%), Gaps = 8/188 (4%)
Query: 136 PCNFLVFGLGGETPLWRALNHGGRTVFLDENQYYVSHLEGRHPGLEAYDVVYTTTVREFP 195
PCNFLVFGLG ++ +W +LN GG TVFL+E+ ++ + P L A+ V Y T + E
Sbjct: 100 PCNFLVFGLGRDSLMWASLNPGGTTVFLEEDPEWIEAVLKDAPSLRAHHVQYRTHLSE-- 157
Query: 196 XXXXXXXXXXSAECRPVQN--LLYSD-CRLAINDLPNQLYDVAWDIILVDGPRGYTAASP 252
C P + + Y++ C LA+ LP++ YD WD+I+VD P+GY +P
Sbjct: 158 AGRLLSTYKNEPMCLPAKAFPIRYNEKCPLALTSLPDEFYDTEWDLIMVDAPKGYFPEAP 217
Query: 253 GRMSAIFTAGVMARSRAEKGAETDVLVHDYEREVERACSREFLCEENRVEETSTRSLAHF 312
GRM+AIF++ +MAR+R G T V +HD R+VE A + EFLCE+ +V S L HF
Sbjct: 218 GRMAAIFSSAIMARNRKGDGT-THVFLHDVNRKVENAFANEFLCEKYKV--NSVGRLWHF 274
Query: 313 VVPGGRDL 320
+P ++
Sbjct: 275 EIPNAANM 282
>AT1G27930.1 | chr1:9731510-9732379 REVERSE LENGTH=290
Length = 289
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 9/216 (4%)
Query: 102 FDALVQYASAGGNSTASMPGGDXXXXXXXXXXXXPCNFLVFGLGGETPLWRALNHGGRTV 161
A+V YA++ N + P NFLVFGLG ++ +W +LN G+T+
Sbjct: 65 LQAIVHYATS--NVVPQQNLAEISISFNILKKLAPANFLVFGLGRDSLMWASLNPRGKTL 122
Query: 162 FLDENQYYVSHLEGRHPGLEAYDVVYTTTVREFPXXXXXXXXXXSAECRPVQNLLYSD-- 219
FL+E+ + + P L A+ V Y T +++ +C P ++ L +
Sbjct: 123 FLEEDLEWFQKVTKDSPFLRAHHVRYRTQLQQ--ADSLLRSYKTEPKCFPAKSYLRGNEK 180
Query: 220 CRLAINDLPNQLYDVAWDIILVDGPRGYTAASPGRMSAIFTAGVMARSRAEKGAETDVLV 279
C+LA+ LP++ YD WD+++VD P+GY A +PGRM+AIF+A VMAR+R + G T V +
Sbjct: 181 CKLALTGLPDEFYDTEWDLLMVDAPKGYFAEAPGRMAAIFSAAVMARNRKKPGV-THVFL 239
Query: 280 HDYEREVERACSREFLCEENRVEETSTRSLAHFVVP 315
HD R VE+ + EFLC + RV L HF +P
Sbjct: 240 HDVNRRVEKTFAEEFLCRKYRVNAAG--RLWHFAIP 273
>AT4G24910.1 | chr4:12817954-12818901 REVERSE LENGTH=316
Length = 315
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 90/177 (50%), Gaps = 9/177 (5%)
Query: 136 PCNFLVFGLGGETPLWRALNHGGRTVFLDEN--QYYVSHLEGRHPGLEAYDVVY-TTTVR 192
PCN LVFG + + ++N G TV L++ + + E Y + Y VR
Sbjct: 118 PCNILVFGFAPQYLMLSSINTRGITVILEDEPAKIMIPKAEVNPNNTRIYSLKYHQMEVR 177
Query: 193 EFPXXXXXXXXXXSAECRPVQNLLY---SDCRLAINDLPNQLYDVAWDIILVDGPRGYTA 249
+ C P N + SDC+L + DLP Q+++ WD+I+VDGPRG
Sbjct: 178 N--AYNLLQHARANPACAPNMNNQHQGSSDCKLELRDLPQQVHNTKWDVIVVDGPRGDDL 235
Query: 250 ASPGRMSAIFTAGVMARSRAEKGAETDVLVHDYEREVERACSREFLCEENRVEETST 306
+PGRM +I+TA V+AR + + TDV VHD R E+ S EFLC+EN V T
Sbjct: 236 ETPGRMGSIYTAAVLAR-KGSSNSTTDVFVHDVHRTAEKWLSWEFLCQENLVSAKGT 291
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,344,055
Number of extensions: 229177
Number of successful extensions: 454
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 437
Number of HSP's successfully gapped: 10
Length of query: 336
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 237
Effective length of database: 8,392,385
Effective search space: 1988995245
Effective search space used: 1988995245
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)