Os06g0662200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Eukaryotic transcription factor, DNA-binding domain containing protein.
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Os06g0662200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Eukaryotic transcription factor, DNA-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.35 | 0.608 | 9.11 | -0.0718 | 3.03 | -4.61 | 1.02 | -0.542 | 0.527 | 4.05 | 0.7167 | 95 | 7.36 | -- |
| 167.06 | 0.602 | 9.11 | -0.128 | 2.82 | -4.47 | 0.807 | -- | 0.542 | 4.22 | 0.4324 | 95 | 7.63 | -- |
| 168.06 | 0.604 | 9.11 | -0.106 | 2.86 | -4.47 | -- | -0.143 | 0.548 | 4.22 | 0.4583 | 92 | 7.57 | -- |
| 168.07 | 0.604 | 9.11 | -0.115 | 2.83 | -4.46 | -- | -- | 0.536 | 4.22 | 0.38 | 92 | 7.59 | -- |
| 347.16 | 0.868 | 9.16 | -0.181 | -- | -3.88 | -- | -0.652 | 0.598 | -- | 1.056 | 29 | 9.07 | -- |
| 360.12 | 0.89 | 8.98 | 0.0936 | 4.23 | -- | 0.182 | -- | 0.748 | 9.55 | -- | -- | -- | -- |
| 360.24 | 0.889 | 8.98 | 0.1 | 4.23 | -- | -- | -- | 0.748 | 9.55 | -- | -- | -- | -- |
| 343.14 | 0.863 | 9.1 | -0.0429 | -- | -3.82 | -- | -- | 0.742 | -- | 1.072 | 29 | 9.02 | -- |
| 168.42 | 0.604 | 9.11 | -- | 2.83 | -4.47 | -- | -- | 0.548 | 4.21 | 0.445 | 92 | 7.57 | -- |
| 1416.25 | 1.76 | 9.09 | 0.0695 | -- | -- | -- | -- | 0.759 | -- | -- | -- | -- | -- |
| 360.51 | 0.888 | 8.98 | -- | 4.23 | -- | -- | -- | 0.737 | 9.54 | -- | -- | -- | -- |
| 332.87 | 0.85 | 9.08 | -- | -- | -4.02 | -- | -- | 0.743 | -- | 0.2769 | 52 | 9.64 | -- |
| 1416.38 | 1.76 | 9.1 | -- | -- | -- | -- | -- | 0.751 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.74 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 7 |
| 3 | 168.84 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 4 | 169.65 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 5 | 169.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 15 |
| 6 | 169.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 7 | 170.37 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 8 | 170.70 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 10 | 171.22 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 14 | 172.93 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 15 | 173.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 16 | 173.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 17 | 173.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 18 | 173.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 19 | 173.57 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 20 | 173.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 25 | 173.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 26 | 173.71 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 27 | 173.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 9 |
| 28 | 173.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 29 | 174.11 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 32 | 175.17 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 33 | 176.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 17 |
| 34 | 176.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 38 | 178.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 44 | 181.36 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 18 |
| 46 | 181.66 | radiation | 1.0 | 90 | < th | dose independent | sin | 13 | NA |
| 47 | 181.89 | radiation | 1.0 | 90 | > th | dose independent | sin | 13 | NA |
| 48 | 181.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 52 | 182.67 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 53 | 183.44 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 54 | 183.72 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 58 | 184.92 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 91 | 186.73 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 115 | 189.27 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 6 |
| 116 | 189.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 6 |
| 117 | 189.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 6 |
| 120 | 189.59 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 125 | 190.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 6 |
| 127 | 190.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 19 |
| 131 | 190.54 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 138 | 190.85 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 6 |
| 158 | 191.29 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 169 | 191.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 18 |
| 174 | 191.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 18 |
| 183 | 192.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 185 | 192.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 18 |
| 197 | 193.01 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 237 | 194.09 | radiation | 1.0 | 90 | > th | dose independent | rect. | 15 | 15 |
| 254 | 194.71 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 18 |
| 301 | 196.77 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 316 | 197.81 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 6 |
| 330 | 198.92 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 337 | 199.25 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 16 |
| 346 | 199.59 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 16 |
| 391 | 201.02 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 18 | 18 |
| 444 | 202.42 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 469 | 203.33 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 480 | 203.91 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 493 | 204.58 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 6 |
| 512 | 204.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 513 | 204.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 515 | 204.98 | wind | 7.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 531 | 205.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 8 |
| 532 | 205.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 537 | 206.10 | radiation | 1.0 | 270 | < th | dose independent | rect. | 10 | 16 |
| 547 | 206.48 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 560 | 206.62 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 564 | 206.70 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 565 | 206.72 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 581 | 206.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 583 | 206.89 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 584 | 206.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 586 | 206.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 587 | 206.89 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 602 | 207.09 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 622 | 207.81 | radiation | 20.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 627 | 207.86 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 630 | 207.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 631 | 207.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 632 | 207.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 635 | 207.96 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 648 | 208.18 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 650 | 208.28 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 658 | 208.61 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 671 | 209.21 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 18 |
| 675 | 209.48 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 18 |
| 676 | 209.48 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 694 | 210.10 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 10 | 16 |
| 695 | 210.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 16 |
| 696 | 210.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 720 | 210.73 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 18 |
| 731 | 210.88 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 734 | 210.98 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 741 | 211.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 746 | 211.23 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 776 | 211.90 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 780 | 211.96 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 814 | 212.54 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 843 | 213.11 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 887 | 213.77 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 920 | 214.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 18 |