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Os06g0661700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : RabGAP/TBC domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.23 (0.0171) R2 : 0.703
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.45 (0.0448) R2dC : 0.685 R2C : 0.667
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.234 (0.036) R2dN8 : 0.0356 R2N8 : 0.0179
σ : 0.322
deviance : 47.51
__
_____
C
peak time of C : 6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.01 0.274 8.23 -0.485 1.26 0.615 0.525 -0.725 -0.266 7.94 1.08 281 -- --
36.35 0.281 8.23 -0.515 1.25 0.646 0.891 -- -0.283 8.18 1.15 283 -- --
34.75 0.275 8.23 -0.471 1.27 0.6 -- -0.829 -0.266 7.88 1.03 272 -- --
38.34 0.288 8.23 -0.485 1.25 0.59 -- -- -0.272 7.87 1.055 284 -- --
51.1 0.333 8.22 -0.22 -- 1.32 -- 0.449 -0.297 -- 0.0002101 683 -- --
39.91 0.296 8.24 -0.536 1.46 -- 0.184 -- -0.293 6.01 -- -- -- --
39.99 0.296 8.24 -0.534 1.46 -- -- -- -0.293 5.98 -- -- -- --
40.73 0.297 8.26 -0.225 -- 1.84 -- -- -0.239 -- 0.4362 757 -- --
44.54 0.311 8.22 -- 1.26 0.709 -- -- -0.254 8.33 1.04 285 -- --
150.17 0.573 8.27 -0.491 -- -- -- -- -0.26 -- -- -- -- --
47.51 0.322 8.23 -- 1.45 -- -- -- -0.234 6 -- -- -- --
43.3 0.306 8.25 -- -- 1.85 -- -- -0.191 -- 0.009994 750 -- --
156.54 0.584 8.25 -- -- -- -- -- -0.206 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.52 temperature 10.0 270 > th dose dependent rect. 6 12
2 31.69 temperature 10.0 720 > th dose dependent rect. 6 4
15 32.30 temperature 30.0 270 < th dose independent rect. 17 13
17 32.33 humidity 60.0 270 > th dose independent rect. 17 13
28 32.51 temperature 20.0 90 > th dose dependent rect. 24 21
33 32.68 temperature 10.0 720 > th dose dependent rect. 23 11
41 32.75 atmosphere 1000.0 30 > th dose independent rect. 17 11
82 33.04 temperature 10.0 270 > th dose dependent sin 0 NA
86 33.06 humidity 70.0 10 > th dose independent rect. 18 13
91 33.08 temperature 15.0 270 > th dose independent rect. 6 12
101 33.11 radiation 20.0 720 < th dose dependent rect. 17 6
102 33.11 radiation 10.0 270 < th dose dependent rect. 17 13
106 33.14 humidity 50.0 720 > th dose independent rect. 17 6
121 33.17 humidity 50.0 720 > th dose independent rect. 10 20
127 33.18 temperature 15.0 720 > th dose independent rect. 6 5
128 33.18 atmosphere 1015.0 720 < th dose independent rect. 18 5
141 33.22 wind 7.0 720 < th dose independent rect. 15 3
142 33.22 radiation 1.0 270 < th dose independent rect. 16 14
143 33.22 radiation 10.0 10 < th dose independent rect. 9 19
148 33.22 radiation 1.0 270 < th dose dependent rect. 1 23
151 33.24 humidity 50.0 720 > th dose independent rect. 11 11
152 33.24 humidity 50.0 720 > th dose independent rect. 10 13
156 33.25 precipitation 0.1 270 < th dose independent rect. 6 12
162 33.25 precipitation 0.1 270 < th dose dependent rect. 6 12
163 33.26 atmosphere 1000.0 720 > th dose independent rect. 16 1
169 33.27 radiation 1.0 270 < th dose independent rect. 16 19
170 33.27 temperature 10.0 720 > th dose dependent sin 5 NA
173 33.28 radiation 10.0 10 < th dose independent rect. 12 16
179 33.28 radiation 1.0 270 < th dose dependent rect. 16 19
183 33.30 wind 9.0 270 < th dose independent rect. 6 12
198 33.32 atmosphere 1015.0 720 < th dose independent rect. 11 11
213 33.35 radiation 1.0 270 > th dose independent rect. 6 13
238 33.39 wind 5.0 720 < th dose independent rect. 2 4
260 33.43 precipitation 0.1 720 < th dose independent rect. 15 3
263 33.43 precipitation 0.1 720 < th dose dependent rect. 15 3
267 33.44 precipitation 0.1 720 < th dose independent rect. 6 5
269 33.44 temperature 10.0 270 > th dose independent rect. 18 12
272 33.44 atmosphere 1015.0 270 < th dose independent rect. 6 12
273 33.44 radiation 20.0 270 < th dose independent rect. 18 12
276 33.44 precipitation 0.1 270 < th dose independent rect. 18 12
278 33.44 radiation 1.0 720 < th dose dependent rect. 18 4
279 33.44 precipitation 0.1 720 < th dose dependent rect. 6 5
280 33.44 precipitation 0.1 270 < th dose dependent rect. 18 12
285 33.45 wind 9.0 270 < th dose independent rect. 18 12
286 33.45 atmosphere 1015.0 720 < th dose independent rect. 10 13
288 33.45 radiation 1.0 270 < th dose independent rect. 1 23
308 33.47 wind 1.0 720 > th dose independent rect. 18 5
321 33.49 wind 9.0 720 < th dose independent rect. 6 5
323 33.49 precipitation 0.1 720 < th dose independent rect. 23 19
330 33.49 precipitation 0.1 720 < th dose dependent rect. 23 19
335 33.50 atmosphere 1015.0 720 < th dose independent rect. 18 21
343 33.51 atmosphere 1015.0 720 < th dose independent rect. 19 11
348 33.51 radiation 40.0 270 < th dose dependent rect. 18 12
354 33.52 atmosphere 1015.0 720 < th dose independent rect. 18 13
358 33.53 wind 9.0 720 < th dose independent rect. 18 5
367 33.53 radiation 20.0 10 < th dose dependent rect. 9 19
378 33.55 precipitation 0.1 270 < th dose independent rect. 2 11
385 33.55 precipitation 0.1 270 < th dose dependent rect. 2 11
395 33.57 radiation 1.0 720 < th dose independent rect. 17 5
396 33.57 precipitation 0.1 720 < th dose independent rect. 18 5
399 33.57 precipitation 0.1 720 < th dose dependent rect. 18 5
405 33.58 temperature 10.0 720 > th dose independent rect. 18 5
407 33.58 atmosphere 995.0 720 > th dose independent rect. 6 5
408 33.58 atmosphere 1015.0 720 < th dose independent rect. 6 5
409 33.58 radiation 20.0 720 < th dose independent rect. 18 5
415 33.58 temperature 10.0 720 > th dose independent rect. 11 19
416 33.58 temperature 10.0 720 > th dose independent rect. 23 19
435 33.60 temperature 15.0 30 > th dose independent rect. 17 11
446 33.61 humidity 50.0 10 > th dose independent rect. 16 12
449 33.61 radiation 20.0 90 < th dose independent rect. 15 13
476 33.63 temperature 30.0 270 < th dose independent sin 19 NA
478 33.63 wind 7.0 30 < th dose independent rect. 4 13
487 33.64 temperature 10.0 270 > th dose independent rect. 2 11
489 33.64 atmosphere 995.0 270 > th dose independent rect. 2 11
490 33.64 atmosphere 1015.0 270 < th dose independent rect. 2 11
491 33.64 temperature 10.0 270 > th dose independent rect. 13 13
502 33.65 wind 7.0 720 < th dose independent rect. 1 6
503 33.65 wind 9.0 270 < th dose independent rect. 13 13
530 33.67 humidity 50.0 720 > th dose independent rect. 6 5
533 33.67 radiation 1.0 270 < th dose independent rect. 8 22
546 33.68 temperature 10.0 30 > th dose independent rect. 4 13
548 33.68 atmosphere 1015.0 30 < th dose independent rect. 4 13
567 33.69 precipitation 0.1 30 < th dose independent rect. 4 13
572 33.69 precipitation 0.1 30 < th dose dependent rect. 4 13
578 33.70 wind 9.0 30 < th dose independent rect. 17 11
580 33.70 wind 9.0 720 < th dose independent rect. 22 13
632 33.72 atmosphere 995.0 720 > th dose independent rect. 22 20
643 33.73 radiation 40.0 720 < th dose independent rect. 15 3
660 33.74 temperature 15.0 720 > th dose independent rect. 18 21
664 33.74 radiation 20.0 10 < th dose dependent rect. 13 15
668 33.75 temperature 10.0 720 > th dose independent rect. 3 3
670 33.75 temperature 10.0 720 > th dose independent rect. 15 3
671 33.75 temperature 30.0 720 < th dose independent rect. 3 3
672 33.75 humidity 50.0 720 > th dose independent rect. 3 3
675 33.75 atmosphere 995.0 720 > th dose independent rect. 3 3
676 33.75 atmosphere 1015.0 720 < th dose independent rect. 15 3
677 33.75 radiation 20.0 720 < th dose independent rect. 3 3
692 33.75 temperature 10.0 720 > th dose independent rect. 6 21
698 33.75 radiation 40.0 30 < th dose dependent rect. 14 14
704 33.76 wind 9.0 720 < th dose independent rect. 23 11
705 33.76 temperature 10.0 720 > th dose independent rect. 11 11
706 33.76 temperature 10.0 720 > th dose independent rect. 23 11
707 33.76 atmosphere 995.0 720 > th dose independent rect. 23 11
708 33.76 precipitation 0.1 30 < th dose independent rect. 17 11
709 33.76 precipitation 0.1 720 < th dose independent rect. 23 11
720 33.76 temperature 10.0 720 > th dose independent rect. 10 13
721 33.76 temperature 10.0 720 > th dose independent rect. 22 13
723 33.76 atmosphere 995.0 720 > th dose independent rect. 22 13
724 33.76 wind 9.0 720 < th dose independent rect. 6 21
725 33.76 precipitation 0.1 30 < th dose dependent rect. 17 11
726 33.76 precipitation 0.1 720 < th dose dependent rect. 23 11
730 33.77 humidity 50.0 720 > th dose independent rect. 23 11
732 33.77 precipitation 0.1 270 < th dose independent rect. 14 12
739 33.77 precipitation 0.1 270 < th dose dependent rect. 14 12
742 33.77 temperature 20.0 90 > th dose dependent rect. 7 21
744 33.77 radiation 1.0 270 < th dose dependent rect. 7 22
753 33.78 atmosphere 995.0 30 > th dose independent rect. 4 13
765 33.78 temperature 20.0 10 > th dose dependent rect. 7 22
767 33.79 radiation 1.0 720 > th dose independent rect. 7 3
771 33.79 radiation 1.0 720 > th dose independent rect. 6 5
786 33.80 temperature 15.0 720 > th dose independent rect. 4 1
788 33.80 wind 9.0 270 < th dose independent rect. 2 11
793 33.80 precipitation 0.1 720 < th dose independent rect. 22 13
797 33.80 wind 9.0 720 < th dose independent rect. 23 19
799 33.80 precipitation 0.1 720 < th dose dependent rect. 22 13
808 33.81 atmosphere 1015.0 720 < th dose independent rect. 3 3
829 33.81 radiation 40.0 720 < th dose dependent rect. 3 3
843 33.82 humidity 50.0 720 > th dose independent rect. 22 13
862 33.83 wind 1.0 270 > th dose independent rect. 18 12
906 33.84 temperature 10.0 720 > th dose dependent rect. 4 1