BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0661700 Os06g0661700|AK066945
(705 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29950.1 | chr4:14657464-14660370 FORWARD LENGTH=829 485 e-137
AT5G57210.1 | chr5:23181088-23183705 REVERSE LENGTH=738 459 e-129
AT2G19240.1 | chr2:8349048-8352562 REVERSE LENGTH=841 436 e-122
AT4G13730.1 | chr4:7970299-7974055 FORWARD LENGTH=450 54 3e-07
AT1G04830.2 | chr1:1358782-1361844 REVERSE LENGTH=460 52 8e-07
AT2G43490.1 | chr2:18055106-18058179 REVERSE LENGTH=746 49 7e-06
>AT4G29950.1 | chr4:14657464-14660370 FORWARD LENGTH=829
Length = 828
Score = 485 bits (1248), Expect = e-137, Method: Compositional matrix adjust.
Identities = 316/781 (40%), Positives = 413/781 (52%), Gaps = 137/781 (17%)
Query: 9 RFSALRGARWRADLGVLPDCASVSTEEFXXXXXXXXXXXXXXXXXXXIDPHLSKDEENAP 68
RF+ LRG RWR +LGVLP S S ++ IDPHLSKD N+P
Sbjct: 16 RFANLRGLRWRVNLGVLP-FQSSSIDDLRKATAESRRRYAALRRRLLIDPHLSKDVRNSP 74
Query: 69 DLAVENPLSQNPESTWGQYFRNAELEKMLNQDLSRLYPELGNFFQTTICQSMLGRILLVW 128
DL+++NPLSQNP+STWG++FRNAELEK L+QDLSRLYPE ++FQ CQ ML RILL+W
Sbjct: 75 DLSIDNPLSQNPDSTWGRFFRNAELEKTLDQDLSRLYPEHWSYFQAPGCQGMLRRILLLW 134
Query: 129 SLRYPELGYKQGMHELLAPLLYVLHADVHYFKQVRELHDELFSDDFDGQTFPDR-IKLN- 186
L++PE GY+QGMHELLAPLLYVLH DV +VR+ +++ F D FDG +F +R I N
Sbjct: 135 CLKHPEYGYRQGMHELLAPLLYVLHVDVDRLSEVRKSYEDHFIDRFDGLSFEERDITYNF 194
Query: 187 ---------RSDRTNTIEGSAAKIXXXXXXXXXXXXXXXINDAYGAEGELGIILSEKFME 237
D I+G++ KI ++DAYGAEGELGI+LSEKFME
Sbjct: 195 EFKKFLEDFTDDEIGGIQGNSKKIKSLDELDPEIQSIVRLSDAYGAEGELGIVLSEKFME 254
Query: 238 HDAYCMFESLMHGSMNGAQGVVAITDFYSLSPAPESSTGLTPVREASSAIYHLLASVDSP 297
HDAYCMF++L MNG G VA+ F++ SPA S TGL PV EAS+A YHLL+ VDS
Sbjct: 255 HDAYCMFDAL----MNGVHGCVAMAGFFAYSPASGSHTGLPPVLEASTAFYHLLSFVDSS 310
Query: 298 LHSHLMELGVEPQYFALRWLRVLFGREFSLDNLLFIWDEIFSSPNHSYCADIKNQSDYQF 357
LHSHL+ELGVEPQYF LRWLRVLFGREF L +LL +WDEIFS+ N + D N ++ +
Sbjct: 311 LHSHLVELGVEPQYFGLRWLRVLFGREFLLQDLLIVWDEIFSADNTTRT-DADNNTNQSY 369
Query: 358 KILCSHRGALILSMAVSMMLHLRSSLLGSEHATSCLVRLLNFPGDTDLKSLIDKAKLLQP 417
KI S RGALI MAVSM+L LRSSLL +E+A SCL RLLNFP D++ +I+KAK LQ
Sbjct: 370 KIFDSPRGALISGMAVSMILCLRSSLLATENAASCLQRLLNFPEKIDVRKIIEKAKSLQT 429
Query: 418 FALEANL----------------PSSPLRG----------KSPL--NPPNYWEETWKILQ 449
AL+ ++ P+ P R KSPL P +YWE+ W++L
Sbjct: 430 LALDDDVRSSALSINDGFDQSISPAVPARTNSFPSGSTSPKSPLIITPQSYWEDQWRVLH 489
Query: 450 MS--EEKRSGGSINRMK----VRGLFR--------RSSPNTESNVSRTKDAN--FEDSNS 493
+ EEK+S I + K V+ LFR SPN +S V + A ED N
Sbjct: 490 KAAEEEKKSPSPIQKKKPWFRVKRLFRAESEPTHSAKSPNGKSEVKISSVARNLLEDFNR 549
Query: 494 ------TSENMITTSNN-----------------------VLEAGQPEVHRSSSVDVRDA 524
N I NN V+E ++ + +RD+
Sbjct: 550 QLVSEPVEANPIDVVNNEDSSIRETEDINTDFETAAEESIVMEENSSDLFSDPNSPLRDS 609
Query: 525 LGVACGNLSRDSSTSLSCGTEYDHETHHADEPCA-------------SHDDKVVSEPDPL 571
+ + S + S T D ET D P + S D + PL
Sbjct: 610 NYIENDSDSSNESNLFPDETVKDRETSVVDSPLSISSQPSMEFIVSLSKDQETSVVDSPL 669
Query: 572 PVHNDKIDEVTIAAIQTCALVDYQQSQQNKPCSVNGKSEV---------KYQQNFAVHE- 621
PV + E + D + ++ +S+V K+ +N E
Sbjct: 670 PVSSQPSIEFPVTQSN-----DEDNAADKSVANIKERSKVLPGKFQWFWKFGRNVTAEET 724
Query: 622 ------------VGRKETFEL------GSSSDVADKELLGTLRLLGESMVENIEVIDLLF 663
V E+ L GS D D+ ++ TL+ LG SM+E+I+VI+ +F
Sbjct: 725 RCNGVESSKSDLVCSSESHSLPQASSSGSKGDT-DQNVMNTLKNLGNSMLEHIQVIESVF 783
Query: 664 Q 664
Q
Sbjct: 784 Q 784
>AT5G57210.1 | chr5:23181088-23183705 REVERSE LENGTH=738
Length = 737
Score = 459 bits (1180), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/499 (49%), Positives = 313/499 (62%), Gaps = 40/499 (8%)
Query: 5 PARERFSALRGARWRADLGVLPDCASVSTEEFXXXXXXXXXXXXXXXXXXXIDPHLSKDE 64
P RF LRG RWR +LG+LP S + +E IDPHL K
Sbjct: 25 PQDHRFEKLRGVRWRINLGILPSSPSSTIDELRRVTADSRRRYAALRRRLLIDPHLPKKG 84
Query: 65 ENAPDLAVENPLSQNPESTWGQYFRNAELEKMLNQDLSRLYPELGNFFQTTICQSMLGRI 124
N+PDL ++NPLSQNP+STWG++FRNAELEK L+QDLSRLYPE G++FQ++ CQ ML RI
Sbjct: 85 TNSPDLTIDNPLSQNPDSTWGRFFRNAELEKTLDQDLSRLYPEHGSYFQSSGCQGMLRRI 144
Query: 125 LLVWSLRYPELGYKQGMHELLAPLLYVLHADVHYFKQVRELHDELFSDDFDGQTFPDR-- 182
LL+W L++PE+GY+QGMHELLAPLLYVL DV Y +VR +++ F D FD F +R
Sbjct: 145 LLLWCLKHPEIGYRQGMHELLAPLLYVLQVDVQYLTEVRSNYEDQFVDLFDELAFQERDS 204
Query: 183 ------IK--LNRSDRTNTIEGSAA------KIXXXXXXXXXXXXXXXINDAYGAEGELG 228
IK L+ S +G + K ++DAYG EGELG
Sbjct: 205 GAYDFDIKKVLDDSMEDEEEDGPPSGSTKKKKPKSFDELDTETQTAVLLSDAYGGEGELG 264
Query: 229 IILSEKFMEHDAYCMFESLMHGSMNGAQGVVAITDFYSLSPAPESSTGLTPVREASSAIY 288
I+LS+KFMEHDAY MF++LM+G + G V++ +F+ S +S TGL PV EAS A+Y
Sbjct: 265 IVLSDKFMEHDAYTMFDALMYG--GSSLGSVSVANFFIYSAPNDSITGLPPVIEASGALY 322
Query: 289 HLLASVDSPLHSHLMELGVEPQYFALRWLRVLFGREFSLDNLLFIWDEIFSSPNHSYCAD 348
HLL+ VD+ LHSHL+ELGVEPQYFALRWLRVLFGREF L NLL +WDEIFS+ N
Sbjct: 323 HLLSLVDASLHSHLVELGVEPQYFALRWLRVLFGREFPLSNLLIVWDEIFSADNSEVERG 382
Query: 349 IKNQSDYQFKILCSHRGALILSMAVSMMLHLRSSLLGSEHATSCLVRLLNFPGDTDLKSL 408
++ +F+IL S RGAL+ MAVSM+L+LRSSLL +E+ATS L +LLNFP D DL +
Sbjct: 383 VEADLGCEFRILSSPRGALVAGMAVSMILYLRSSLLATENATSSLKKLLNFPEDIDLSKV 442
Query: 409 IDKAKLLQPFALEANL--------PSSPLRGKS-------------PLNPPNYWEETWKI 447
I+KAK LQ ALE N P P+RG S + P +YWEE W++
Sbjct: 443 IEKAKTLQSLALEINARRDLIPKGPRKPMRGHSLSVDSISLGSSPVGIEPESYWEEKWRV 502
Query: 448 LQMS-EEKRSGGSINRMKV 465
L + EE+R ++ R K
Sbjct: 503 LNSAEEEERRKKALQRPKA 521
>AT2G19240.1 | chr2:8349048-8352562 REVERSE LENGTH=841
Length = 840
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/478 (49%), Positives = 300/478 (62%), Gaps = 45/478 (9%)
Query: 9 RFSALRGARWRADLGVLPDCASVSTEEFXXXXXXXXXXXXXXXXXXXIDPHLSKDEENAP 68
RF+ LRG RWR +LGVLP AS S +EF +DPH+ K E+++P
Sbjct: 25 RFANLRGVRWRVNLGVLPSLAS-SIDEFRRAAANSRRRRRLL-----MDPHVLKHEDSSP 78
Query: 69 DLAVENPLSQNPESTWGQYFRNAELEKMLNQDLSRLYPELGNFFQTTICQSMLGRILLVW 128
+ ++NPLSQNP STWGQ+FRNAELEK L+QDLSRLYPE +FQT Q ML RILL+W
Sbjct: 79 NFIIDNPLSQNPNSTWGQFFRNAELEKTLDQDLSRLYPEHWCYFQTPRYQGMLRRILLLW 138
Query: 129 SLRYPELGYKQGMHELLAPLLYVLHADVHYFKQVRELHDELFSDDFDGQTFPDR-----I 183
L++PE GY+QGMHELLAPLLYVLH D+ +VR+ +++ F+D FD +F +R
Sbjct: 139 CLKHPEYGYRQGMHELLAPLLYVLHVDIMRLSEVRKSYEDYFTDRFDSLSFMERDITYTF 198
Query: 184 KLNR----SDRTNTIEGSAAKIXXXXXXXXXXXXXXXINDAYGAEGELGIILSEKFMEHD 239
N+ D +G + + D+YG E ELGI+LSEKFMEHD
Sbjct: 199 DFNKFMDSVDNGIGSQGHSKNFNSLDELDPEVQSLVMLTDSYGTESELGIVLSEKFMEHD 258
Query: 240 AYCMFESLMHGSMNGAQGVVAITDFYSLSPAPESSTGLTPVREASSAIYHLLASVDSPLH 299
AYCMF++L M+G G A+ F+S SPA S TGLTPV EA SA Y +LA VDS LH
Sbjct: 259 AYCMFDAL----MSGIHGCFAMASFFSYSPASGSHTGLTPVLEACSAFYRILAVVDSSLH 314
Query: 300 SHLMELGVEPQYFALRWLRVLFGREFSLDNLLFIWDEIFSSPNHSYC-ADIKNQSDYQFK 358
SHL+ELGVEPQYF LRWLRVLFGREF L +LL +WDEI + N + D +NQ+ F+
Sbjct: 315 SHLVELGVEPQYFGLRWLRVLFGREFLLQDLLLVWDEIILADNSARTDEDSRNQN---FR 371
Query: 359 ILCSHRGALILSMAVSMMLHLRSSLLGSEHATSCLVRLLNFPGDTDLKSLIDKAKLLQPF 418
I RG L+L M VSM+L+LRSSLL +E+AT CL RLLNFP + DL +I KAKLLQ
Sbjct: 372 IFDCPRGTLVLGMTVSMILYLRSSLLSTENATCCLQRLLNFPENIDLNKIIQKAKLLQAL 431
Query: 419 ALEANLPSS-------------PLRGK-------SPL--NPPNYWEETWKILQMSEEK 454
L+ ++ S+ P R K SPL P +YWE+ W++L +EE+
Sbjct: 432 VLDTDMLSALSINGVFDQSNFVPARTKSCSTSPRSPLIIAPESYWEKKWRVLHKAEEE 489
>AT4G13730.1 | chr4:7970299-7974055 FORWARD LENGTH=450
Length = 449
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 73 ENPLSQNPESTWGQYFRNAELEKMLNQDLSRLYPELGNFFQTTIC----QSMLGRILLVW 128
++PLS S W +F++ E+ + + +D+ R +P++ F + Q L IL ++
Sbjct: 207 DHPLSLGTTSLWNNFFKDTEVLEQIERDVMRTHPDMHFFSGDSAVAKSNQDALKNILTIF 266
Query: 129 SLRYPELGYKQGMHELLAPLLYVLHAD 155
+ P + Y QGM+E+LAP+ Y+ D
Sbjct: 267 AKLNPGIRYVQGMNEILAPIFYIFKND 293
>AT1G04830.2 | chr1:1358782-1361844 REVERSE LENGTH=460
Length = 459
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 73 ENPLSQNPESTWGQYFRNAELEKMLNQDLSRLYPELGNF-----FQTTICQSMLGRILLV 127
++PLS S W YF++ E + +++D+ R +P++ F F + +SM ILLV
Sbjct: 203 DHPLSLGKASIWNTYFQDTETIEQIDRDVKRTHPDIPFFSGESSFARSNQESM-KNILLV 261
Query: 128 WSLRYPELGYKQGMHELLAPLLYVLHAD 155
++ + Y QGM+E+LAP+ YV D
Sbjct: 262 FAKLNQGIRYVQGMNEILAPIFYVFRND 289
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 237 EHDAYCMFESLMHGSMNGAQGVVAITDFYSLSPAPESSTGLTPVREASSAIYHLLASVDS 296
E DA+ F L+ G DFY + + +R A + + L+ D
Sbjct: 299 EADAFFCFVELLSG----------FRDFY----CQQLDNSVVGIRSAITRLSQLVRKHDE 344
Query: 297 PLHSHL-MELGVEPQYFALRWLRVLFGREFSLDNLLFIWDEIFSSP 341
L HL + V PQ++A RW+ +L +EFS + L IWD + S P
Sbjct: 345 ELWRHLEITTKVNPQFYAFRWITLLLTQEFSFFDSLHIWDALLSDP 390
>AT2G43490.1 | chr2:18055106-18058179 REVERSE LENGTH=746
Length = 745
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 276 GLTPVREASSAIYHLLASVDSPLHSHLMELGVEPQYFALRWLRVLFGREFSLDNLLFIWD 335
G T V + +++H+L D + SHL +G E +FA R L VLF RE S + L +W+
Sbjct: 441 GPTGVMDQLQSLWHILQITDKDIFSHLSRIGAESLHFAFRMLLVLFRRELSFNEALRMWE 500
Query: 336 EIFSS 340
++++
Sbjct: 501 MMWAA 505
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,783,595
Number of extensions: 617195
Number of successful extensions: 1820
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1804
Number of HSP's successfully gapped: 7
Length of query: 705
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 599
Effective length of database: 8,200,473
Effective search space: 4912083327
Effective search space used: 4912083327
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 115 (48.9 bits)