Os06g0656300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF588 family protein.
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Os06g0656300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF588 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.13 | 0.511 | 10.7 | -1.07 | 1.46 | 1.89 | 0.494 | -2.46 | -0.163 | 7.07 | 21.43 | 1293 | -- | -- |
| 122.77 | 0.516 | 10.6 | -0.394 | 1.45 | 1.69 | 0.315 | -- | 0.0172 | 6.94 | 20.73 | 1371 | -- | -- |
| 117.94 | 0.506 | 10.7 | -1.24 | 1.44 | 1.94 | -- | -3.21 | -0.165 | 7.05 | 22.61 | 1300 | -- | -- |
| 122.99 | 0.517 | 10.6 | -0.37 | 1.45 | 1.71 | -- | -- | 0.0239 | 6.81 | 20.7 | 1396 | -- | -- |
| 227.94 | 0.703 | 10.8 | -1.25 | -- | 1.95 | -- | -3.16 | -0.168 | -- | 22.8 | 1352 | -- | -- |
| 217.78 | 0.692 | 10.5 | 0.253 | 1.52 | -- | 0.506 | -- | 0.429 | 6.48 | -- | -- | -- | -- |
| 218.41 | 0.692 | 10.5 | 0.26 | 1.52 | -- | -- | -- | 0.427 | 6.46 | -- | -- | -- | -- |
| 232.68 | 0.71 | 10.7 | -0.344 | -- | 1.76 | -- | -- | 0.0426 | -- | 21.06 | 1365 | -- | -- |
| 125.9 | 0.523 | 10.6 | -- | 1.45 | 1.58 | -- | -- | 0.0906 | 6.83 | 21.22 | 1388 | -- | -- |
| 339.24 | 0.861 | 10.6 | 0.299 | -- | -- | -- | -- | 0.459 | -- | -- | -- | -- | -- |
| 220.2 | 0.694 | 10.5 | -- | 1.53 | -- | -- | -- | 0.398 | 6.45 | -- | -- | -- | -- |
| 235.38 | 0.715 | 10.7 | -- | -- | 1.66 | -- | -- | 0.105 | -- | 21.46 | 1361 | -- | -- |
| 341.6 | 0.863 | 10.6 | -- | -- | -- | -- | -- | 0.426 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 9 | 118.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 17 | 118.63 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 23 | 118.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 40 | 119.07 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 111 | 119.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 134 | 120.05 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 7 |
| 192 | 120.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 214 | 120.95 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 20 |
| 215 | 120.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 21 |
| 220 | 121.03 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 237 | 121.19 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 263 | 121.41 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 269 | 121.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 347 | 122.10 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 386 | 122.46 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 608 | 123.75 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 3 |
| 657 | 124.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 719 | 124.63 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 799 | 125.08 | temperature | 25 | 1440 | > th | dose independent | rect. | 5 | 18 |
| 812 | 125.17 | temperature | 25 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 921 | 125.73 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |