Os06g0643800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sucrose-phosphate synthase 7 (EC 2.4.1.14) (Fragment).
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Os06g0643800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sucrose-phosphate synthase 7 (EC 2.4.1.14) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.51 | 0.284 | 11.5 | -0.307 | 1.18 | -0.725 | -0.398 | 2.96 | 0.00367 | 6.92 | 25.71 | 22 | -- | -- |
| 39.11 | 0.291 | 11.6 | -0.534 | 1.13 | -0.437 | -0.601 | -- | -0.046 | 6.51 | 26.3 | 247 | -- | -- |
| 36.91 | 0.283 | 11.5 | -0.304 | 1.18 | -0.716 | -- | 3.09 | 0.00657 | 6.89 | 25.72 | 22 | -- | -- |
| 39.72 | 0.294 | 11.6 | -0.622 | 1.13 | -0.439 | -- | -- | -0.084 | 6.6 | 26.4 | 240 | -- | -- |
| 75.61 | 0.405 | 11.5 | 0.12 | -- | -1.58 | -- | 3.81 | 0.225 | -- | 24.28 | 368 | -- | -- |
| 42.53 | 0.306 | 11.6 | -0.678 | 1.29 | -- | -0.402 | -- | -0.097 | 6.38 | -- | -- | -- | -- |
| 42.93 | 0.307 | 11.6 | -0.683 | 1.28 | -- | -- | -- | -0.0956 | 6.38 | -- | -- | -- | -- |
| 81.74 | 0.421 | 11.6 | -0.441 | -- | -1.27 | -- | -- | 0.0456 | -- | 24.5 | 364 | -- | -- |
| 49.45 | 0.328 | 11.6 | -- | 1.07 | -0.581 | -- | -- | -0.00966 | 6.76 | 26.1 | 236 | -- | -- |
| 128.56 | 0.53 | 11.6 | -0.65 | -- | -- | -- | -- | -0.0683 | -- | -- | -- | -- | -- |
| 55.22 | 0.348 | 11.6 | -- | 1.27 | -- | -- | -- | -0.0196 | 6.41 | -- | -- | -- | -- |
| 86.72 | 0.434 | 11.6 | -- | -- | -1.33 | -- | -- | 0.104 | -- | 24.4 | 368 | -- | -- |
| 139.69 | 0.552 | 11.6 | -- | -- | -- | -- | -- | 0.00376 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.24 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 4 |
| 4 | 31.49 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 25 | 33.11 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 4 | 13 |
| 33 | 33.37 | radiation | 30.0 | 30 | < th | dose independent | rect. | 23 | 12 |
| 41 | 33.55 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 13 |
| 60 | 33.95 | temperature | 25.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 74 | 34.21 | temperature | 25.0 | 720 | > th | dose independent | rect. | 6 | 2 |
| 83 | 34.26 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 23 | 12 |
| 98 | 34.38 | radiation | 20.0 | 90 | < th | dose independent | rect. | 23 | 10 |
| 125 | 34.56 | humidity | 70.0 | 90 | > th | dose independent | rect. | 23 | 10 |
| 161 | 34.89 | temperature | 20.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 167 | 34.93 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 14 |
| 176 | 35.00 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 14 |
| 178 | 35.02 | temperature | 20.0 | 270 | > th | dose dependent | sin | 2 | NA |
| 182 | 35.05 | radiation | 20.0 | 270 | < th | dose independent | rect. | 21 | 11 |
| 251 | 35.32 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 23 | 10 |
| 263 | 35.36 | temperature | 30.0 | 90 | < th | dose independent | rect. | 23 | 10 |
| 269 | 35.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 10 |
| 272 | 35.38 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 24 | 10 |
| 273 | 35.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 14 |
| 303 | 35.48 | temperature | 25.0 | 270 | > th | dose independent | sin | 3 | NA |
| 304 | 35.48 | wind | 7.0 | 30 | < th | dose independent | rect. | 23 | 10 |
| 306 | 35.48 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 10 |
| 310 | 35.48 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 10 |
| 311 | 35.48 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 14 |
| 348 | 35.54 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 21 | 11 |
| 352 | 35.55 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 14 |
| 411 | 35.69 | temperature | 30.0 | 30 | < th | dose independent | rect. | 11 | 12 |
| 412 | 35.69 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 14 |
| 416 | 35.69 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 14 |
| 440 | 35.75 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 14 |
| 453 | 35.78 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 10 |
| 454 | 35.78 | humidity | 70.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 457 | 35.78 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 10 |
| 505 | 35.92 | temperature | 25.0 | 270 | > th | dose independent | rect. | 10 | 7 |
| 519 | 35.95 | temperature | 30.0 | 30 | < th | dose independent | rect. | 9 | 14 |
| 535 | 35.97 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 14 |
| 549 | 36.03 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 12 |
| 561 | 36.06 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 565 | 36.08 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 10 |
| 587 | 36.12 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 597 | 36.13 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 23 | 19 |
| 599 | 36.14 | temperature | 25.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 619 | 36.18 | radiation | 40.0 | 10 | < th | dose independent | rect. | 23 | 21 |
| 630 | 36.21 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 18 | 5 |
| 636 | 36.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 14 |
| 639 | 36.22 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 12 | 6 |
| 640 | 36.22 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 12 | 8 |
| 654 | 36.25 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 703 | 36.32 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 23 | 21 |
| 706 | 36.33 | temperature | 25.0 | 90 | > th | dose independent | rect. | 12 | 6 |
| 730 | 36.37 | radiation | 30.0 | 30 | < th | dose independent | rect. | 23 | 19 |
| 829 | 36.49 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 10 | 23 |
| 834 | 36.51 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 23 | 12 |
| 854 | 36.54 | temperature | 30.0 | 30 | < th | dose independent | rect. | 23 | 12 |
| 866 | 36.57 | temperature | 25.0 | 270 | > th | dose independent | rect. | 12 | 4 |
| 892 | 36.60 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 5 |
| 895 | 36.60 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 914 | 36.63 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 18 | 5 |
| 935 | 36.67 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 952 | 36.69 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 6 |
| 953 | 36.69 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 957 | 36.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 974 | 36.71 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 976 | 36.71 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 12 | 7 |
| 983 | 36.72 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 3 |