Os06g0592400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytosolic aldehyde dehydrogenase RF2C.
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Os06g0592400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytosolic aldehyde dehydrogenase RF2C.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.71 | 0.555 | 10.1 | -1.44 | 2.17 | 1.8 | 0.503 | -4.33 | -0.105 | 4.52 | 20.84 | 777 | -- | -- |
| 148.8 | 0.568 | 9.98 | -0.661 | 1.87 | 1.61 | 0.479 | -- | 0.122 | 3.81 | 13.44 | 2688 | -- | -- |
| 140.3 | 0.552 | 10.1 | -1.5 | 2.2 | 1.83 | -- | -4.65 | -0.12 | 4.54 | 21.23 | 766 | -- | -- |
| 148.74 | 0.568 | 9.98 | -0.577 | 1.85 | 1.82 | -- | -- | 0.129 | 3.86 | 7.427 | 1245 | -- | -- |
| 313.66 | 0.825 | 10.1 | -1.79 | -- | 2.14 | -- | -4.9 | -0.0906 | -- | 23.81 | 1200 | -- | -- |
| 201.08 | 0.665 | 9.91 | -0.0212 | 2.01 | -- | 0.48 | -- | 0.454 | 3.66 | -- | -- | -- | -- |
| 201.77 | 0.665 | 9.91 | -0.0288 | 2.01 | -- | -- | -- | 0.452 | 3.65 | -- | -- | -- | -- |
| 327.24 | 0.843 | 9.97 | -0.483 | -- | 1.67 | -- | -- | 0.236 | -- | 23.89 | 1194 | -- | -- |
| 156.31 | 0.582 | 9.96 | -- | 1.85 | 1.56 | -- | -- | 0.23 | 3.85 | 10.58 | 1225 | -- | -- |
| 425.49 | 0.964 | 9.91 | 0.0551 | -- | -- | -- | -- | 0.505 | -- | -- | -- | -- | -- |
| 201.8 | 0.665 | 9.91 | -- | 2.01 | -- | -- | -- | 0.455 | 3.65 | -- | -- | -- | -- |
| 332.95 | 0.85 | 9.96 | -- | -- | 1.59 | -- | -- | 0.31 | -- | 24.01 | 1191 | -- | -- |
| 425.57 | 0.963 | 9.91 | -- | -- | -- | -- | -- | 0.499 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.93 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 2 | 129.72 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 8 | 131.34 | radiation | 40 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 13 | 132.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 20 | 133.68 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 37 | 134.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 59 | 135.48 | radiation | 1 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 133 | 136.84 | radiation | 10 | 4320 | < th | dose independent | rect. | 22 | 7 |
| 143 | 136.98 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 7 |
| 169 | 137.37 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 175 | 137.43 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 189 | 137.46 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 18 |
| 264 | 138.28 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 18 |
| 296 | 138.48 | temperature | 20 | 720 | > th | dose dependent | rect. | 9 | 21 |
| 303 | 138.52 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 331 | 138.79 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 340 | 138.83 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 344 | 138.85 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 353 | 138.91 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 357 | 138.95 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 18 |
| 375 | 139.05 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 16 |
| 384 | 139.07 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 15 |
| 401 | 139.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 15 |
| 421 | 139.19 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 19 |
| 485 | 139.43 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 501 | 139.46 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 538 | 139.55 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 561 | 139.63 | wind | 5 | 43200 | > th | dose dependent | sin | 16 | NA |
| 562 | 139.64 | wind | 5 | 43200 | > th | dose independent | sin | 17 | NA |
| 573 | 139.67 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 707 | 140.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 712 | 140.08 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 738 | 140.13 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 741 | 140.14 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 762 | 140.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 772 | 140.20 | wind | 5 | 43200 | < th | dose independent | sin | 17 | NA |
| 781 | 140.23 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 783 | 140.23 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 18 |
| 822 | 140.30 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 824 | 140.30 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 7 |
| 833 | 140.32 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 8 |
| 847 | 140.34 | wind | 5 | 43200 | < th | dose independent | sin | 23 | NA |
| 861 | 140.36 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 865 | 140.37 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 911 | 140.45 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 915 | 140.46 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 982 | 140.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 23 |