Os06g0560400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF862, eukaryotic domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0560400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF862, eukaryotic domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.51 | 0.237 | 10 | -0.465 | 0.773 | 0.544 | 0.545 | -1.59 | 0.0814 | 23.5 | 10.4 | 1310 | -- | -- |
| 27.59 | 0.245 | 9.99 | -0.122 | 0.747 | 0.538 | 0.453 | -- | 0.173 | 23.5 | 10.59 | 1195 | -- | -- |
| 26.43 | 0.239 | 10 | -0.509 | 0.801 | 0.537 | -- | -1.65 | 0.0733 | 23.7 | 10.75 | 1639 | -- | -- |
| 28.47 | 0.249 | 9.99 | -0.142 | 0.74 | 0.547 | -- | -- | 0.17 | 23.5 | 9.512 | 1176 | -- | -- |
| 55.05 | 0.346 | 10 | -0.426 | -- | 1.08 | -- | -0.925 | 0.0578 | -- | 6.821 | 893 | -- | -- |
| 32.23 | 0.266 | 9.97 | 0.0403 | 0.806 | -- | 0.477 | -- | 0.268 | 23.6 | -- | -- | -- | -- |
| 33.21 | 0.27 | 9.97 | 0.0208 | 0.804 | -- | -- | -- | 0.266 | 23.6 | -- | -- | -- | -- |
| 55.76 | 0.348 | 9.99 | -0.248 | -- | 1.06 | -- | -- | 0.106 | -- | -24.74 | 888 | -- | -- |
| 28.93 | 0.251 | 9.98 | -- | 0.745 | 0.486 | -- | -- | 0.194 | 23.5 | 13.41 | 1171 | -- | -- |
| 73.85 | 0.402 | 9.95 | 0.0434 | -- | -- | -- | -- | 0.275 | -- | -- | -- | -- | -- |
| 33.22 | 0.27 | 9.97 | -- | 0.804 | -- | -- | -- | 0.263 | 23.6 | -- | -- | -- | -- |
| 57.17 | 0.352 | 9.98 | -- | -- | 0.745 | -- | -- | 0.153 | -- | 21.2 | 898 | -- | -- |
| 73.9 | 0.401 | 9.95 | -- | -- | -- | -- | -- | 0.27 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.95 | temperature | 30 | 10 | < th | dose dependent | sin | 14 | NA |
| 7 | 23.18 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 8 | 23.23 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 13 | 23.36 | temperature | 10 | 10 | > th | dose dependent | sin | 12 | NA |
| 19 | 23.46 | temperature | 10 | 90 | > th | dose dependent | sin | 13 | NA |
| 46 | 23.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 10 |
| 73 | 24.03 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 83 | 24.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 95 | 24.14 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 97 | 24.15 | wind | 7 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 117 | 24.25 | temperature | 15 | 720 | > th | dose dependent | sin | 17 | NA |
| 124 | 24.27 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 140 | 24.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 7 |
| 143 | 24.33 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 156 | 24.38 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 15 |
| 206 | 24.52 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 271 | 24.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 9 |
| 280 | 24.67 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 281 | 24.67 | humidity | 80 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 282 | 24.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 325 | 24.75 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 341 | 24.77 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 7 |
| 351 | 24.78 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 356 | 24.79 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 364 | 24.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 377 | 24.82 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 397 | 24.85 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 407 | 24.86 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 430 | 24.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 442 | 24.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 15 |
| 456 | 24.91 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 459 | 24.91 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 461 | 24.91 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 475 | 24.92 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 503 | 24.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 11 |
| 525 | 24.96 | humidity | 70 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 547 | 24.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 562 | 24.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 567 | 24.98 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 568 | 24.98 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 570 | 24.98 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 16 |
| 616 | 25.00 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 622 | 25.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 638 | 25.01 | humidity | 90 | 14400 | > th | dose dependent | sin | 10 | NA |
| 667 | 25.02 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 668 | 25.02 | temperature | 20 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 714 | 25.04 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 731 | 25.05 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 756 | 25.06 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 773 | 25.07 | humidity | 70 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 798 | 25.08 | temperature | 25 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 801 | 25.08 | humidity | 70 | 43200 | < th | dose independent | rect. | 24 | 11 |
| 824 | 25.09 | temperature | 25 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 828 | 25.09 | temperature | 25 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 853 | 25.10 | temperature | 25 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 862 | 25.10 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 872 | 25.10 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 920 | 25.12 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 921 | 25.12 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 956 | 25.12 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 16 |
| 967 | 25.13 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 997 | 25.14 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 999 | 25.14 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 4 |