Os06g0560000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ferroportin1 family protein.
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Os06g0560000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ferroportin1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 299.35 | 0.813 | 8.34 | -0.318 | 2.9 | 1.68 | 0.136 | -1.63 | 0.652 | 5.7 | 21.5 | 1736 | -- | -- |
| 305.41 | 0.814 | 8.29 | 0.115 | 2.91 | 1.79 | 0.12 | -- | 0.732 | 5.68 | 21.55 | 1736 | -- | -- |
| 299.37 | 0.806 | 8.34 | -0.323 | 2.9 | 1.68 | -- | -1.63 | 0.649 | 5.71 | 21.5 | 1770 | -- | -- |
| 305.46 | 0.814 | 8.29 | 0.128 | 2.9 | 1.78 | -- | -- | 0.755 | 5.69 | 21.52 | 1736 | -- | -- |
| 715.62 | 1.25 | 8.39 | -0.199 | -- | 1.78 | -- | -1.62 | 0.707 | -- | 21.5 | 1339 | -- | -- |
| 399.7 | 0.937 | 8.17 | 0.918 | 2.87 | -- | 0.0802 | -- | 1.28 | 5.67 | -- | -- | -- | -- |
| 399.72 | 0.936 | 8.17 | 0.918 | 2.87 | -- | -- | -- | 1.28 | 5.67 | -- | -- | -- | -- |
| 721.31 | 1.25 | 8.33 | 0.231 | -- | 1.91 | -- | -- | 0.828 | -- | 21.5 | 1338 | -- | -- |
| 305.77 | 0.814 | 8.29 | -- | 2.92 | 1.81 | -- | -- | 0.734 | 5.72 | 21.51 | 1818 | -- | -- |
| 828.38 | 1.34 | 8.21 | 1.01 | -- | -- | -- | -- | 1.35 | -- | -- | -- | -- | -- |
| 421.95 | 0.961 | 8.19 | -- | 2.89 | -- | -- | -- | 1.18 | 5.66 | -- | -- | -- | -- |
| 722.42 | 1.25 | 8.34 | -- | -- | 1.98 | -- | -- | 0.762 | -- | 21.48 | 1345 | -- | -- |
| 855.29 | 1.37 | 8.24 | -- | -- | -- | -- | -- | 1.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 302.32 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 2 | 304.35 | humidity | 80 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 8 | 307.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 11 | 307.81 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 12 | 307.88 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 15 | 308.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 18 | 308.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 20 |
| 21 | 308.82 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 23 | 308.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 28 | 309.05 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 35 | 309.17 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 51 | 309.30 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 55 | 309.34 | wind | 9 | 43200 | > th | dose dependent | rect. | 22 | 3 |
| 65 | 309.47 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 72 | 309.65 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 96 | 310.13 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 108 | 310.33 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 114 | 310.47 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 125 | 310.77 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 126 | 310.77 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 160 | 311.27 | humidity | 80 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 162 | 311.31 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 174 | 311.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 180 | 311.58 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 192 | 311.70 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 196 | 311.78 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 200 | 311.83 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 209 | 311.91 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 210 | 311.92 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 218 | 311.96 | wind | 7 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 224 | 312.00 | temperature | 25 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 227 | 312.00 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 231 | 312.06 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 236 | 312.11 | radiation | 40 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 239 | 312.12 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 240 | 312.12 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 244 | 312.16 | radiation | 40 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 247 | 312.16 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 248 | 312.18 | wind | 9 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 253 | 312.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 261 | 312.27 | temperature | 25 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 288 | 312.43 | radiation | 20 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 308 | 312.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 2 |
| 314 | 312.52 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 326 | 312.62 | radiation | 40 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 331 | 312.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 2 |
| 337 | 312.68 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 388 | 312.94 | radiation | 40 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 398 | 313.01 | radiation | 40 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 413 | 313.08 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 464 | 313.32 | wind | 9 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 467 | 313.34 | radiation | 30 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 573 | 313.80 | wind | 9 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 741 | 314.55 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 4 |
| 743 | 314.55 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 752 | 314.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 757 | 314.60 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 778 | 314.80 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 788 | 314.84 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 794 | 314.89 | temperature | 15 | 1440 | > th | dose dependent | sin | 13 | NA |
| 797 | 314.91 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 809 | 314.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 838 | 315.12 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 840 | 315.13 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 879 | 315.25 | wind | 9 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 885 | 315.28 | temperature | 20 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 956 | 315.55 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 984 | 315.63 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 989 | 315.65 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 13 | 7 |