Os06g0559400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0559400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 602.02 | 1.15 | 8.79 | 1.36 | 5.22 | 3.45 | -0.138 | -3.35 | 1.81 | 20.9 | 73.14 | 1518 | 1.41 | -- |
| 618.84 | 1.16 | 8.82 | 1.21 | 5.27 | 3.47 | -0.162 | -- | 1.82 | 20.9 | 73 | 1531 | 1.36 | -- |
| 595.15 | 1.14 | 8.79 | 1.33 | 5.78 | 3.9 | -- | -4.11 | 1.85 | 20.6 | 75 | 1594 | 1.27 | -- |
| 612.76 | 1.15 | 8.89 | 1 | 5.79 | 3.73 | -- | -- | 1.73 | 20.8 | 75 | 1599 | 0.691 | -- |
| 965.72 | 1.46 | 8.79 | 0.222 | -- | 4.31 | -- | -1.86 | 1.35 | -- | 64 | 3076 | 7.36 | -- |
| 816.28 | 1.34 | 8.89 | 0.141 | 4.86 | -- | -0.848 | -- | 1.52 | 21.7 | -- | -- | -- | -- |
| 818.94 | 1.34 | 8.89 | 0.174 | 4.87 | -- | -- | -- | 1.53 | 21.6 | -- | -- | -- | -- |
| 824.8 | 1.34 | 8.76 | 0.204 | -- | 4.81 | -- | -- | 1.51 | -- | 48.25 | 3022 | 8.12 | -- |
| 635.42 | 1.17 | 8.88 | -- | 5.59 | 3.19 | -- | -- | 1.67 | 21 | 74.27 | 1592 | 0.000225 | -- |
| 2221.16 | 2.2 | 8.76 | 0.214 | -- | -- | -- | -- | 1.52 | -- | -- | -- | -- | -- |
| 819.74 | 1.34 | 8.89 | -- | 4.87 | -- | -- | -- | 1.51 | 21.6 | -- | -- | -- | -- |
| 822.83 | 1.34 | 8.82 | -- | -- | 6.93 | -- | -- | 1.24 | -- | 48.71 | 3163 | 10.5 | -- |
| 2222.37 | 2.2 | 8.76 | -- | -- | -- | -- | -- | 1.49 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 607.02 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 4 | 610.02 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 15 |
| 7 | 610.43 | humidity | 80 | 1440 | < th | dose dependent | rect. | 21 | 17 |
| 13 | 610.92 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 7 |
| 19 | 611.40 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 34 | 613.91 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 36 | 614.28 | humidity | 80 | 1440 | < th | dose dependent | sin | 6 | NA |
| 38 | 615.06 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 43 | 615.83 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 53 | 617.19 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 60 | 618.74 | humidity | 50 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 98 | 621.53 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 113 | 622.59 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 11 |
| 161 | 623.94 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 175 | 624.77 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 181 | 625.05 | humidity | 70 | 1440 | > th | dose independent | sin | 8 | NA |
| 263 | 631.43 | humidity | 70 | 1440 | < th | dose independent | sin | 9 | NA |
| 297 | 632.81 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 492 | 639.99 | humidity | 70 | 720 | > th | dose independent | rect. | 13 | 13 |
| 497 | 640.13 | humidity | 60 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 504 | 640.48 | radiation | 20 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 508 | 640.58 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 11 |
| 593 | 643.38 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 12 |
| 603 | 643.58 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 604 | 643.58 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 606 | 643.60 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 614 | 643.71 | humidity | 70 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 626 | 643.94 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 631 | 643.96 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 17 |
| 673 | 644.12 | humidity | 50 | 1440 | > th | dose dependent | sin | 2 | NA |
| 686 | 644.17 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 689 | 644.17 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 721 | 644.63 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 722 | 644.64 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 724 | 644.69 | humidity | 80 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 757 | 645.06 | radiation | 10 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 767 | 645.17 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 797 | 645.53 | humidity | 70 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 822 | 645.99 | humidity | 70 | 720 | > th | dose independent | sin | 16 | NA |
| 848 | 646.48 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 18 |
| 864 | 647.03 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 868 | 647.08 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 936 | 648.01 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |