Os06g0554300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0554300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 223.26 | 0.702 | 7.92 | -1.47 | 1.61 | -0.295 | 0.0734 | 2.45 | -0.422 | 9.31 | 24.79 | 285 | -- | -- |
| 234.99 | 0.714 | 7.87 | -0.794 | 1.65 | -0.382 | 0.159 | -- | -0.231 | 9.47 | 24 | 427 | -- | -- |
| 223.28 | 0.696 | 7.92 | -1.47 | 1.61 | -0.295 | -- | 2.46 | -0.423 | 9.31 | 24.79 | 285 | -- | -- |
| 235.02 | 0.714 | 7.86 | -0.808 | 1.61 | -0.371 | -- | -- | -0.24 | 9.42 | 24.1 | 370 | -- | -- |
| 366.91 | 0.892 | 7.95 | -1.37 | -- | -0.155 | -- | 2.15 | -0.347 | -- | 24.5 | 184 | -- | -- |
| 243.05 | 0.731 | 7.83 | -0.662 | 1.54 | -- | 0.193 | -- | -0.0755 | 9.6 | -- | -- | -- | -- |
| 243.19 | 0.73 | 7.83 | -0.654 | 1.54 | -- | -- | -- | -0.0751 | 9.62 | -- | -- | -- | -- |
| 361.7 | 0.886 | 7.82 | -0.47 | -- | 0.66 | -- | -- | 0.111 | -- | 25.9 | 699 | -- | -- |
| 251.29 | 0.738 | 7.83 | -- | 1.58 | -0.295 | -- | -- | -0.119 | 9.44 | 24.05 | 461 | -- | -- |
| 383.97 | 0.916 | 7.87 | -0.667 | -- | -- | -- | -- | -0.072 | -- | -- | -- | -- | -- |
| 254.47 | 0.746 | 7.81 | -- | 1.54 | -- | -- | -- | -0.00224 | 9.65 | -- | -- | -- | -- |
| 366.78 | 0.892 | 7.81 | -- | -- | 0.774 | -- | -- | 0.2 | -- | 25.94 | 699 | -- | -- |
| 395.69 | 0.928 | 7.85 | -- | -- | -- | -- | -- | 0.002 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 214.86 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 2 | 215.00 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 4 | 215.13 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 6 | 215.16 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 19 | 215.34 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 20 | 215.36 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 24 | 215.36 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 12 |
| 53 | 216.07 | humidity | 60.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 58 | 216.33 | humidity | 60.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 71 | 216.56 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 75 | 216.65 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 122 | 217.76 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 136 | 217.89 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 291 | 220.01 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 9 |
| 315 | 220.17 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 330 | 220.22 | wind | 7.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 356 | 220.38 | wind | 7.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 361 | 220.45 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 363 | 220.46 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 402 | 220.61 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 480 | 220.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 482 | 220.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 498 | 221.02 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 502 | 221.04 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 505 | 221.05 | humidity | 60.0 | 14400 | > th | dose independent | no | NA | NA |
| 506 | 221.05 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 599 | 221.11 | humidity | 70.0 | 14400 | < th | dose dependent | no | NA | NA |
| 600 | 221.11 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 638 | 221.12 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 7 | 14 |
| 659 | 221.14 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 662 | 221.14 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 813 | 221.21 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 864 | 221.33 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 902 | 221.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 908 | 221.54 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 929 | 221.61 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 931 | 221.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 939 | 221.68 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 961 | 221.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 966 | 221.78 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 981 | 221.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 982 | 221.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 984 | 221.84 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 4 |