Os06g0542200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NADP oxidoreductase, coenzyme F420-dependent family protein.
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Os06g0542200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NADP oxidoreductase, coenzyme F420-dependent family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 164.74 | 0.603 | 5.37 | -0.841 | 0.288 | 3.02 | 0.762 | 3.87 | 0.255 | 3.09 | 9.672 | 5827 | -- | -- |
| 177.52 | 0.621 | 5.53 | -1.65 | 0.332 | 2.71 | 0.858 | -- | 0.0231 | 2.81 | 10.33 | 5888 | -- | -- |
| 166.52 | 0.601 | 5.37 | -0.838 | 0.296 | 3.03 | -- | 3.95 | 0.256 | 3.67 | 11.01 | 5810 | -- | -- |
| 171.08 | 0.609 | 5.42 | -0.793 | 0.395 | 1.73 | -- | -- | 0.499 | 3.45 | 26.33 | 5792 | -- | -- |
| 170.28 | 0.608 | 5.36 | -0.808 | -- | 3.06 | -- | 4.07 | 0.285 | -- | 9.682 | 5579 | -- | -- |
| 306.3 | 0.82 | 5.38 | -0.335 | 0.382 | -- | 0.934 | -- | 0.634 | 2.98 | -- | -- | -- | -- |
| 309.07 | 0.823 | 5.38 | -0.355 | 0.394 | -- | -- | -- | 0.628 | 3.48 | -- | -- | -- | -- |
| 172.04 | 0.611 | 5.42 | -1.04 | -- | 1.94 | -- | -- | 0.498 | -- | 26.01 | 5634 | -- | -- |
| 193.18 | 0.647 | 5.36 | -- | 0.256 | 1.58 | -- | -- | 0.703 | 3.54 | 27.6 | 5731 | -- | -- |
| 317.76 | 0.833 | 5.38 | -0.339 | -- | -- | -- | -- | 0.639 | -- | -- | -- | -- | -- |
| 312.4 | 0.827 | 5.37 | -- | 0.387 | -- | -- | -- | 0.668 | 3.49 | -- | -- | -- | -- |
| 196.43 | 0.653 | 5.36 | -- | -- | 1.61 | -- | -- | 0.728 | -- | 27.44 | 5636 | -- | -- |
| 320.79 | 0.836 | 5.37 | -- | -- | -- | -- | -- | 0.676 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.27 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 2 | 161.33 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 4 | 161.49 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 5 | 161.55 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 8 | 161.80 | radiation | 1 | 4320 | < th | dose independent | rect. | 16 | 14 |
| 30 | 163.02 | radiation | 1 | 4320 | > th | dose independent | rect. | 16 | 14 |
| 55 | 164.29 | radiation | 10 | 14400 | < th | dose dependent | rect. | 16 | 13 |
| 59 | 164.45 | radiation | 10 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 60 | 164.45 | radiation | 10 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 79 | 164.93 | radiation | 40 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 80 | 164.93 | radiation | 40 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 82 | 164.94 | radiation | 40 | 14400 | < th | dose dependent | rect. | 17 | 7 |
| 88 | 165.01 | radiation | 40 | 14400 | < th | dose dependent | rect. | 17 | 12 |
| 120 | 165.29 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 147 | 165.55 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 163 | 165.98 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 175 | 166.04 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 191 | 166.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 192 | 166.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 193 | 166.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 206 | 166.29 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 210 | 166.35 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 218 | 166.41 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 238 | 166.50 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 244 | 166.56 | radiation | 1 | 4320 | < th | dose independent | sin | 15 | NA |
| 259 | 166.76 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 266 | 166.81 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 279 | 166.87 | radiation | 1 | 4320 | > th | dose independent | sin | 15 | NA |
| 307 | 167.21 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 318 | 167.26 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 3 |
| 357 | 167.48 | temperature | 25 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 377 | 167.62 | temperature | 10 | 4320 | > th | dose dependent | sin | 6 | NA |
| 451 | 167.86 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 513 | 168.02 | temperature | 25 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 602 | 168.27 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 14 |
| 764 | 168.88 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 809 | 169.07 | radiation | 10 | 14400 | < th | dose dependent | sin | 15 | NA |
| 924 | 169.36 | temperature | 30 | 4320 | < th | dose dependent | sin | 7 | NA |
| 964 | 169.53 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 967 | 169.54 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 968 | 169.54 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 969 | 169.54 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 978 | 169.55 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 14 |
| 985 | 169.57 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 12 |