Os06g0523300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0523300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.66 | 0.52 | 12.9 | 0.961 | 1.25 | -2.08 | -0.469 | 0.0507 | -0.0081 | 4.39 | 10.66 | 9 | 10.9 | -- |
| 121.9 | 0.514 | 12.9 | 0.989 | 1.23 | -1.99 | -0.46 | -- | -1.14e-05 | 4.87 | 9.881 | 5 | 11.3 | -- |
| 122.98 | 0.516 | 12.8 | 0.956 | 1.22 | -1.98 | -- | 0.141 | -0.00256 | 4.99 | 9.847 | 7 | 11.4 | -- |
| 121.66 | 0.514 | 12.9 | 0.97 | 1.22 | -1.97 | -- | -- | 0.00372 | 4.93 | 9.85 | 4 | 11.3 | -- |
| 145.92 | 0.566 | 12.9 | 0.944 | -- | -2.72 | -- | -0.0599 | -0.0279 | -- | 63.79 | 22 | 11.5 | -- |
| 164.46 | 0.601 | 12.8 | 0.978 | 2.67 | -- | -0.0665 | -- | 0.00498 | 7.35 | -- | -- | -- | -- |
| 164.47 | 0.601 | 12.8 | 0.977 | 2.67 | -- | -- | -- | 0.00512 | 7.36 | -- | -- | -- | -- |
| 143.22 | 0.557 | 12.9 | 0.977 | -- | -2.78 | -- | -- | -0.0397 | -- | 79.11 | 35 | 11.6 | -- |
| 146.1 | 0.563 | 12.9 | -- | 1.23 | -1.99 | -- | -- | -0.104 | 4.75 | 11.19 | 4 | 11.1 | -- |
| 542.81 | 1.09 | 12.9 | 1.02 | -- | -- | -- | -- | 0.0492 | -- | -- | -- | -- | -- |
| 189.61 | 0.644 | 12.8 | -- | 2.68 | -- | -- | -- | -0.104 | 7.33 | -- | -- | -- | -- |
| 167.63 | 0.603 | 12.9 | -- | -- | -2.81 | -- | -- | -0.158 | -- | 78.02 | 35 | 11.7 | -- |
| 570.32 | 1.11 | 12.9 | -- | -- | -- | -- | -- | -0.0641 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.02 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 15 | 4 |
| 5 | 119.39 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 11 | 8 |
| 13 | 120.20 | radiation | 1.0 | 30 | < th | dose independent | rect. | 16 | 3 |
| 15 | 120.37 | humidity | 50.0 | 90 | > th | dose independent | rect. | 16 | 19 |
| 18 | 121.32 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 20 |
| 19 | 121.39 | radiation | 1.0 | 30 | < th | dose independent | rect. | 11 | 8 |
| 39 | 123.18 | radiation | 1.0 | 30 | < th | dose independent | rect. | 6 | 13 |
| 42 | 123.71 | radiation | 10.0 | 10 | < th | dose dependent | sin | 17 | NA |
| 43 | 123.73 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 20 |
| 49 | 124.67 | temperature | 30.0 | 90 | < th | dose independent | rect. | 16 | 19 |
| 50 | 124.69 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 4 |
| 52 | 125.28 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 16 | 3 |
| 56 | 125.45 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 16 | 3 |
| 67 | 125.87 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 10 |
| 77 | 126.30 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 20 |
| 80 | 126.38 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 16 | 2 |
| 84 | 126.57 | radiation | 1.0 | 90 | > th | dose independent | rect. | 11 | 6 |
| 90 | 126.75 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 17 |
| 94 | 126.87 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 2 |
| 99 | 126.92 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 15 | 4 |
| 103 | 127.00 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 6 |
| 105 | 127.01 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 107 | 127.10 | radiation | 1.0 | 30 | < th | dose independent | sin | 20 | NA |
| 114 | 127.36 | radiation | 1.0 | 30 | > th | dose independent | sin | 20 | NA |
| 118 | 127.38 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 16 | 5 |
| 130 | 127.60 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 135 | 127.70 | humidity | 50.0 | 270 | > th | dose independent | rect. | 11 | 2 |
| 144 | 127.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 2 |
| 145 | 127.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 2 |
| 146 | 127.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 2 |
| 147 | 127.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 2 |
| 148 | 127.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 22 |
| 149 | 127.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 2 |
| 158 | 128.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 2 |
| 177 | 128.41 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 10 |
| 184 | 128.43 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 19 | 10 |
| 185 | 128.44 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 10 |
| 187 | 128.47 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 17 | 2 |
| 194 | 128.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 10 |
| 195 | 128.57 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 10 |
| 197 | 128.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 10 |
| 201 | 128.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 14 |
| 202 | 128.57 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 14 |
| 215 | 128.70 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 10 |
| 226 | 128.85 | humidity | 60.0 | 90 | > th | dose independent | rect. | 16 | 3 |
| 232 | 128.88 | temperature | 10.0 | 90 | > th | dose independent | rect. | 11 | 5 |
| 233 | 128.88 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 11 | 5 |
| 235 | 128.88 | temperature | 10.0 | 90 | > th | dose independent | rect. | 16 | 19 |
| 261 | 128.99 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 265 | 129.03 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 3 |
| 271 | 129.07 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 3 |
| 274 | 129.11 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 16 | 5 |
| 278 | 129.14 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 2 |
| 279 | 129.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 22 |
| 287 | 129.20 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 1 |
| 293 | 129.27 | temperature | 25.0 | 270 | > th | dose independent | rect. | 10 | 4 |
| 304 | 129.36 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 16 | 19 |
| 306 | 129.38 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 20 |
| 307 | 129.41 | wind | 9.0 | 90 | < th | dose independent | rect. | 16 | 19 |
| 308 | 129.41 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 20 |
| 318 | 129.59 | radiation | 1.0 | 10 | > th | dose independent | rect. | 11 | 8 |
| 355 | 130.06 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 14 |
| 390 | 130.32 | wind | 1.0 | 90 | > th | dose independent | rect. | 11 | 5 |
| 396 | 130.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 10 |
| 398 | 130.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 10 |
| 423 | 130.59 | temperature | 30.0 | 30 | < th | dose independent | rect. | 16 | 5 |
| 424 | 130.63 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 20 |
| 460 | 130.90 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 16 | 3 |
| 465 | 130.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 20 |
| 466 | 130.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 20 |
| 477 | 131.05 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 10 |
| 524 | 131.56 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 14 |
| 525 | 131.56 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 14 |
| 542 | 131.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 14 |
| 555 | 131.95 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 16 | 19 |
| 558 | 131.95 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 11 | 7 |
| 559 | 131.95 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 16 | 19 |
| 605 | 132.37 | radiation | 1.0 | 10 | > th | dose independent | rect. | 12 | 4 |
| 606 | 132.37 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 16 | 19 |
| 658 | 132.72 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 12 | 4 |
| 690 | 132.88 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 11 | 18 |
| 698 | 132.91 | wind | 9.0 | 270 | < th | dose dependent | rect. | 11 | 2 |
| 782 | 133.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 15 |
| 824 | 133.78 | radiation | 1.0 | 30 | > th | dose dependent | sin | 15 | NA |
| 828 | 133.80 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 11 | 20 |
| 897 | 134.26 | temperature | 15.0 | 30 | > th | dose independent | rect. | 21 | 19 |
| 953 | 134.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 6 |
| 957 | 134.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 960 | 134.60 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 962 | 134.63 | wind | 9.0 | 10 | < th | dose independent | rect. | 12 | 4 |
| 991 | 134.81 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 994 | 134.81 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 5 |
| 1000 | 134.81 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 19 |