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Os06g0505100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Armadillo-like helical domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0163) R2 : 0.0609
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.186 (0.0343) R2dN8 : 0.0787 R2N8 : 0.0609
σ : 0.307
deviance : 43.18
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.17 0.236 10.4 0.517 0.492 14.7 -0.316 33.1 0.185 3.81 14.9 1361 -- --
25.5 0.237 10.2 0.237 0.501 -0.995 -0.393 -- 0.195 3.79 14.9 1361 -- --
25.47 0.235 10.4 0.53 0.489 14.8 -- 33.2 0.186 3.8 14.92 1350 -- --
25.51 0.235 10.2 0.226 0.499 -0.914 -- -- 0.188 3.79 14.96 1375 -- --
38.57 0.289 10.4 0.529 -- 12.6 -- 28.7 0.205 -- 15.1 1275 -- --
27.38 0.245 10.2 0.277 0.491 -- -0.308 -- 0.205 3.92 -- -- -- --
27.65 0.246 10.2 0.281 0.489 -- -- -- 0.207 3.88 -- -- -- --
37.2 0.284 10.2 0.176 -- -0.725 -- -- 0.183 -- 19.33 1081 -- --
26.08 0.238 10.2 -- 0.46 -0.746 -- -- 0.139 3.92 19.3 1125 -- --
40.79 0.298 10.2 0.301 -- -- -- -- 0.22 -- -- -- -- --
29.73 0.255 10.2 -- 0.495 -- -- -- 0.176 3.87 -- -- -- --
37.65 0.286 10.2 -- -- -0.827 -- -- 0.137 -- 19.85 1050 -- --
43.18 0.307 10.2 -- -- -- -- -- 0.186 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.65 temperature 15.0 10 > th dose independent rect. 12 23
3 23.72 temperature 25.0 270 > th dose independent rect. 20 11
6 23.80 temperature 25.0 720 > th dose dependent rect. 17 8
10 23.81 temperature 25.0 720 > th dose dependent rect. 17 13
14 23.84 temperature 25.0 270 > th dose independent sin 12 NA
16 23.85 temperature 25.0 270 < th dose independent rect. 21 10
19 23.86 temperature 15.0 270 > th dose independent rect. 12 19
20 23.87 temperature 15.0 1440 > th dose independent rect. 5 5
24 23.93 temperature 15.0 270 > th dose independent rect. 10 23
25 23.94 temperature 15.0 270 > th dose independent rect. 12 10
28 23.96 radiation 1.0 1440 > th dose independent rect. 10 3
34 24.00 temperature 15.0 270 > th dose independent rect. 14 16
35 24.00 temperature 15.0 30 > th dose independent rect. 1 23
40 24.02 atmosphere 995.0 270 > th dose dependent rect. 17 10
50 24.04 temperature 25.0 270 > th dose dependent rect. 20 11
59 24.09 radiation 1.0 30 > th dose dependent rect. 11 1
61 24.10 temperature 25.0 270 < th dose independent sin 11 NA
64 24.11 atmosphere 995.0 90 > th dose dependent rect. 20 8
73 24.13 temperature 25.0 270 < th dose independent rect. 18 13
75 24.14 radiation 1.0 1440 > th dose independent rect. 12 1
86 24.16 temperature 15.0 1440 > th dose independent rect. 5 16
93 24.20 temperature 15.0 1440 > th dose independent rect. 4 8
99 24.22 temperature 25.0 270 > th dose independent rect. 20 6
110 24.26 temperature 15.0 1440 > th dose independent rect. 13 8
117 24.28 temperature 15.0 720 > th dose independent rect. 18 6
126 24.30 temperature 25.0 720 > th dose dependent sin 12 NA
128 24.30 temperature 25.0 720 > th dose dependent rect. 20 4
140 24.33 temperature 15.0 1440 > th dose independent rect. 15 6
164 24.40 temperature 25.0 720 > th dose dependent rect. 18 1
183 24.43 temperature 15.0 1440 > th dose independent rect. 10 7
190 24.44 temperature 15.0 1440 > th dose independent rect. 13 10
202 24.45 atmosphere 1015.0 270 < th dose dependent rect. 15 15
203 24.46 temperature 15.0 1440 > th dose independent rect. 10 5
208 24.47 temperature 15.0 1440 > th dose independent rect. 17 4
213 24.48 temperature 15.0 30 > th dose independent rect. 12 21
214 24.48 humidity 60.0 10 > th dose independent rect. 12 23
216 24.49 radiation 20.0 30 > th dose independent rect. 11 1
218 24.49 humidity 90.0 270 > th dose independent rect. 3 4
222 24.50 temperature 25.0 270 < th dose independent rect. 1 6
241 24.53 temperature 15.0 1440 > th dose independent rect. 12 3
248 24.54 temperature 15.0 1440 > th dose independent rect. 15 8
252 24.55 temperature 15.0 1440 > th dose independent rect. 12 5
253 24.55 humidity 80.0 270 > th dose independent rect. 19 6
255 24.55 atmosphere 1000.0 90 > th dose independent rect. 20 8
264 24.56 temperature 25.0 720 > th dose dependent rect. 22 1
265 24.56 temperature 25.0 270 > th dose dependent rect. 22 3
274 24.57 temperature 15.0 10 > th dose independent rect. 14 21
284 24.59 temperature 20.0 720 > th dose independent rect. 12 1
305 24.61 temperature 15.0 270 > th dose independent rect. 1 22
337 24.64 temperature 15.0 1440 > th dose independent rect. 12 16
338 24.64 humidity 60.0 270 > th dose dependent rect. 1 7
342 24.65 temperature 15.0 720 > th dose independent rect. 10 14
344 24.65 temperature 15.0 10 > th dose independent rect. 14 19
362 24.67 temperature 15.0 30 > th dose independent rect. 12 12
383 24.69 wind 5.0 90 < th dose independent rect. 11 16
395 24.70 humidity 80.0 270 > th dose dependent rect. 3 3
396 24.70 atmosphere 1015.0 270 < th dose dependent rect. 8 4
404 24.71 temperature 15.0 1440 > th dose independent rect. 12 14
413 24.72 wind 5.0 270 < th dose independent rect. 17 9
426 24.73 temperature 15.0 720 > th dose independent rect. 8 16
434 24.74 temperature 25.0 720 < th dose independent rect. 18 8
459 24.75 atmosphere 1015.0 30 < th dose dependent rect. 16 17
467 24.76 temperature 15.0 1440 > th dose independent rect. 10 16
469 24.76 temperature 15.0 270 > th dose independent rect. 5 23
474 24.77 wind 9.0 30 < th dose independent rect. 11 1
479 24.77 atmosphere 1010.0 270 < th dose independent rect. 12 9
482 24.77 radiation 40.0 10 < th dose independent rect. 5 15
489 24.77 wind 9.0 30 < th dose dependent rect. 11 16
491 24.77 radiation 40.0 10 > th dose dependent rect. 13 23
502 24.78 atmosphere 1000.0 270 > th dose dependent rect. 22 3
505 24.79 temperature 25.0 720 < th dose independent rect. 19 6
543 24.82 humidity 50.0 30 > th dose independent rect. 11 1
544 24.82 radiation 1.0 270 < th dose independent rect. 3 4
549 24.82 temperature 15.0 1440 > th dose independent rect. 10 18
555 24.82 temperature 20.0 720 < th dose dependent rect. 12 17
558 24.83 temperature 10.0 1440 > th dose independent rect. 12 1
562 24.83 atmosphere 995.0 1440 > th dose independent rect. 12 1
564 24.83 radiation 1.0 1440 < th dose independent rect. 10 3
566 24.83 atmosphere 1015.0 1440 < th dose independent rect. 2 8
567 24.83 radiation 40.0 30 < th dose independent rect. 3 8
571 24.83 wind 9.0 10 < th dose independent rect. 12 23
575 24.83 temperature 10.0 1440 > th dose independent rect. 13 23
578 24.83 atmosphere 995.0 30 > th dose independent rect. 12 23
579 24.83 radiation 1.0 1440 < th dose dependent rect. 10 3
586 24.84 radiation 1.0 30 > th dose independent rect. 11 1
596 24.84 wind 3.0 90 > th dose independent rect. 12 11
603 24.84 atmosphere 1015.0 270 < th dose dependent rect. 1 6
607 24.85 temperature 10.0 30 > th dose independent rect. 11 1
609 24.85 atmosphere 995.0 30 > th dose independent rect. 11 1
610 24.85 atmosphere 1015.0 30 < th dose independent rect. 11 1
611 24.85 precipitation 0.1 30 < th dose independent rect. 11 1
612 24.85 wind 3.0 270 > th dose independent rect. 12 8
618 24.85 temperature 15.0 10 > th dose independent rect. 16 17
619 24.85 atmosphere 1015.0 270 < th dose independent rect. 7 18
623 24.85 temperature 15.0 270 > th dose independent rect. 16 23
625 24.85 precipitation 0.1 30 < th dose dependent rect. 11 1
632 24.85 humidity 50.0 90 > th dose dependent rect. 3 7
637 24.86 wind 1.0 30 > th dose independent rect. 11 1
658 24.87 precipitation 0.1 270 < th dose independent rect. 1 6
660 24.87 radiation 20.0 270 < th dose independent rect. 1 7
672 24.87 precipitation 0.1 270 < th dose dependent rect. 1 6
691 24.88 atmosphere 995.0 4320 > th dose independent rect. 1 1
696 24.88 wind 9.0 270 < th dose independent rect. 1 6
697 24.88 temperature 10.0 270 > th dose independent rect. 1 6
700 24.88 humidity 50.0 270 > th dose independent rect. 1 6
703 24.88 atmosphere 995.0 270 > th dose independent rect. 1 6
704 24.88 atmosphere 1015.0 270 < th dose independent rect. 1 6
713 24.88 temperature 10.0 270 > th dose independent rect. 7 18
718 24.88 atmosphere 1015.0 30 < th dose dependent rect. 11 1
739 24.89 temperature 30.0 30 < th dose independent rect. 3 8
741 24.89 radiation 1.0 270 < th dose independent rect. 3 14
744 24.89 precipitation 0.1 270 < th dose independent rect. 7 18
746 24.89 temperature 15.0 30 > th dose independent rect. 3 23
754 24.89 atmosphere 995.0 30 > th dose dependent rect. 12 8
758 24.89 precipitation 0.1 270 < th dose dependent rect. 7 18
759 24.89 radiation 10.0 10 > th dose dependent rect. 15 21
763 24.90 temperature 15.0 1440 > th dose independent rect. 21 5
771 24.90 precipitation 0.1 30 < th dose independent rect. 12 23
779 24.90 precipitation 0.1 30 < th dose dependent rect. 12 23
800 24.91 radiation 10.0 14400 > th dose independent rect. 17 13
804 24.91 atmosphere 1000.0 30 > th dose independent rect. 20 16
844 24.92 humidity 50.0 270 > th dose independent rect. 21 15
851 24.92 radiation 40.0 270 < th dose dependent rect. 1 7
863 24.93 humidity 50.0 270 > th dose independent rect. 7 18
865 24.93 temperature 15.0 30 > th dose independent rect. 19 23
866 24.93 radiation 40.0 10 > th dose independent rect. 13 23
883 24.94 wind 3.0 90 > th dose independent rect. 12 13
885 24.94 wind 5.0 270 < th dose independent rect. 8 17
894 24.94 wind 1.0 270 > th dose dependent rect. 12 8
921 24.95 temperature 15.0 10 > th dose independent rect. 14 10
934 24.96 radiation 10.0 14400 > th dose independent rect. 17 1
958 24.96 wind 9.0 270 < th dose independent rect. 7 18
988 24.97 radiation 1.0 1440 < th dose independent rect. 12 2
998 24.97 temperature 10.0 270 > th dose independent rect. 21 15
999 24.97 atmosphere 995.0 270 > th dose independent rect. 21 15