BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0505100 Os06g0505100|Os06g0505100
         (2366 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0505100  Armadillo-like helical domain containing protein   4613   0.0  

>Os06g0505100 Armadillo-like helical domain containing protein
          Length = 2366

 Score = 4613 bits (11965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 2258/2354 (95%), Positives = 2258/2354 (95%)

Query: 1    MAKRGGAAGEPIPLSRFGALVAQLESVVASARQKPPDALLCFXXXXXXXXXXXXXPKETI 60
            MAKRGGAAGEPIPLSRFGALVAQLESVVASARQKPPDALLCF             PKETI
Sbjct: 1    MAKRGGAAGEPIPLSRFGALVAQLESVVASARQKPPDALLCFDLLSELSSALDEAPKETI 60

Query: 61   QLWQRKCEDALQSLLFLGARRPVRRLASSAMGRIIERGDAISVYSRASTLQGWLVDGKRT 120
            QLWQRKCEDALQSLLFLGARRPVRRLASSAMGRIIERGDAISVYSRASTLQGWLVDGKRT
Sbjct: 61   QLWQRKCEDALQSLLFLGARRPVRRLASSAMGRIIERGDAISVYSRASTLQGWLVDGKRT 120

Query: 121  DPMAYAGVAQCLGEIYRLFGHKITAGLIETSNIVAKLMKYHEDFVRQDXXXXXXXXXXXX 180
            DPMAYAGVAQCLGEIYRLFGHKITAGLIETSNIVAKLMKYHEDFVRQD            
Sbjct: 121  DPMAYAGVAQCLGEIYRLFGHKITAGLIETSNIVAKLMKYHEDFVRQDALLLLENALEGS 180

Query: 181  XXXXXXXXXXXXFRIIMRGGVSDKSFIVRVAAARCLKAFANIGGPGLGMAEIDTSMSCCV 240
                        FRIIMRGGVSDKSFIVRVAAARCLKAFANIGGPGLGMAEIDTSMSCCV
Sbjct: 181  GGGGSGAAYLEAFRIIMRGGVSDKSFIVRVAAARCLKAFANIGGPGLGMAEIDTSMSCCV 240

Query: 241  KGLEDNVSAVRDSFAEALGSLLALAVNPDAQVKKGVKKQSTSGKKFDDGLQKHLILPFVR 300
            KGLEDNVSAVRDSFAEALGSLLALAVNPDAQVKKGVKKQSTSGKKFDDGLQKHLILPFVR
Sbjct: 241  KGLEDNVSAVRDSFAEALGSLLALAVNPDAQVKKGVKKQSTSGKKFDDGLQKHLILPFVR 300

Query: 301  ANGANAKKLRIGLALSWVFFLQLTCSHSKLVRFYTHMHHYSYLLWVLWYLPGTITLCLFL 360
            ANGANAKKLRIGLALSWVFFLQLTCSHSKLVRFYTHMHHYSYLLWVLWYLPGTITLCLFL
Sbjct: 301  ANGANAKKLRIGLALSWVFFLQLTCSHSKLVRFYTHMHHYSYLLWVLWYLPGTITLCLFL 360

Query: 361  SWSQLLATPVELSSAAQVHSSPTPGGDYSGYLAMIHMKYGTPDSELQNYAVQVTEILQGN 420
            SWSQLLATPVELSSAAQVHSSPTPGGDYSGYLAMIHMKYGTPDSELQNYAVQVTEILQGN
Sbjct: 361  SWSQLLATPVELSSAAQVHSSPTPGGDYSGYLAMIHMKYGTPDSELQNYAVQVTEILQGN 420

Query: 421  ASPDPHALACVLYVLRVGVADQMTEPTQREFLVFLGRKLESSNYTALMRVATLRILSYLL 480
            ASPDPHALACVLYVLRVGVADQMTEPTQREFLVFLGRKLESSNYTALMRVATLRILSYLL
Sbjct: 421  ASPDPHALACVLYVLRVGVADQMTEPTQREFLVFLGRKLESSNYTALMRVATLRILSYLL 480

Query: 481  RSLGEVPSEFKDILDNTVVAALSHSSAHVIIIFGDTTKIRRHGGIGYHFSLVRVEAALTL 540
            RSLGEVPSEFKDILDNTVVAALSHSSAHVIIIFGDTTKIRRHGGIGYHFSLVRVEAALTL
Sbjct: 481  RSLGEVPSEFKDILDNTVVAALSHSSAHVIIIFGDTTKIRRHGGIGYHFSLVRVEAALTL 540

Query: 541  RALAEVDPTCVGGLVSYGITTLHALTETLSFDKGKIMNLELDSLHGQASVLAALVAISPK 600
            RALAEVDPTCVGGLVSYGITTLHALTETLSFDKGKIMNLELDSLHGQASVLAALVAISPK
Sbjct: 541  RALAEVDPTCVGGLVSYGITTLHALTETLSFDKGKIMNLELDSLHGQASVLAALVAISPK 600

Query: 601  LLLGYPARLPKSVLEVSKKMLNGFSRNPVAASAEREAGWXXXXXXXXXMPKEELEDQVFD 660
            LLLGYPARLPKSVLEVSKKMLNGFSRNPVAASAEREAGW         MPKEELEDQVFD
Sbjct: 601  LLLGYPARLPKSVLEVSKKMLNGFSRNPVAASAEREAGWLLLASLLASMPKEELEDQVFD 660

Query: 661  VLLLWAGPFTGNPESYLRHVQDWASELRVLSVAIEALTAFIRSFVSPIMTNANGGILLNP 720
            VLLLWAGPFTGNPESYLRHVQDWASELRVLSVAIEALTAFIRSFVSPIMTNANGGILLNP
Sbjct: 661  VLLLWAGPFTGNPESYLRHVQDWASELRVLSVAIEALTAFIRSFVSPIMTNANGGILLNP 720

Query: 721  VXXXXXXXXXXXXXXXXXXXPNVNSALNLFTTRTLMAYQSLSNPMVYKSEHQQMLQLCSS 780
            V                   PNVNSALNLFTTRTLMAYQSLSNPMVYKSEHQQMLQLCSS
Sbjct: 721  VLAYLGGALSLISSLSSKKLPNVNSALNLFTTRTLMAYQSLSNPMVYKSEHQQMLQLCSS 780

Query: 781  PFSDPSGWEESSCLKFLLDKRDNSLGPWIPGRDSFEDELRAFDGGVDGFLPCVWDVEMSN 840
            PFSDPSGWEESSCLKFLLDKRDNSLGPWIPGRDSFEDELRAFDGGVDGFLPCVWDVEMSN
Sbjct: 781  PFSDPSGWEESSCLKFLLDKRDNSLGPWIPGRDSFEDELRAFDGGVDGFLPCVWDVEMSN 840

Query: 841  FPQPESVSKMLVNQMLLCYGSIFACQDNTVKIRLLNNLDQCLKSGKKQSWFMTVVTNSCV 900
            FPQPESVSKMLVNQMLLCYGSIFACQDNTVKIRLLNNLDQCLKSGKKQSWFMTVVTNSCV
Sbjct: 841  FPQPESVSKMLVNQMLLCYGSIFACQDNTVKIRLLNNLDQCLKSGKKQSWFMTVVTNSCV 900

Query: 901  ALLSGLKEFLTLRGAQSLSTDILSMVQSTFKGILLESEISTAQRRAACEGLGLLARIGND 960
            ALLSGLKEFLTLRGAQSLSTDILSMVQSTFKGILLESEISTAQRRAACEGLGLLARIGND
Sbjct: 901  ALLSGLKEFLTLRGAQSLSTDILSMVQSTFKGILLESEISTAQRRAACEGLGLLARIGND 960

Query: 961  AFTARMARSLLGELITPIDLSYTASVTLSLGCIHRAAGGMALCTLVTPTLWSLHALLLTI 1020
            AFTARMARSLLGELITPIDLSYTASVTLSLGCIHRAAGGMALCTLVTPTLWSLHALLLTI
Sbjct: 961  AFTARMARSLLGELITPIDLSYTASVTLSLGCIHRAAGGMALCTLVTPTLWSLHALLLTI 1020

Query: 1021 EAAGLSYVSQVQGTLFLAMEILLLEENGYVDLRQEIGHLINAIVAVIGPELAPEISSSSE 1080
            EAAGLSYVSQVQGTLFLAMEILLLEENGYVDLRQEIGHLINAIVAVIGPELAPEISSSSE
Sbjct: 1021 EAAGLSYVSQVQGTLFLAMEILLLEENGYVDLRQEIGHLINAIVAVIGPELAPEISSSSE 1080

Query: 1081 TATLIESVRFAQQLVLFAPQAVPVHSHVQSLIPTLYSRQPSLRHLAVSTLRHLIERDPAA 1140
            TATLIESVRFAQQLVLFAPQAVPVHSHVQSLIPTLYSRQPSLRHLAVSTLRHLIERDPAA
Sbjct: 1081 TATLIESVRFAQQLVLFAPQAVPVHSHVQSLIPTLYSRQPSLRHLAVSTLRHLIERDPAA 1140

Query: 1141 MINQNIEENLFSMLDEETDSEIAALVRSTIIRLLYTSCPLRPSRWLAVLRNMGHCHGGGT 1200
            MINQNIEENLFSMLDEETDSEIAALVRSTIIRLLYTSCPLRPSRWLAVLRNMGHCHGGGT
Sbjct: 1141 MINQNIEENLFSMLDEETDSEIAALVRSTIIRLLYTSCPLRPSRWLAVLRNMGHCHGGGT 1200

Query: 1201 FHPAAGAEFSSLFSVSYTLAMVMGVMDCLAEVLATSIARNTSEGLSSSGHDPVDSNAEND 1260
            FHPAAGAEFSSLFSVSYTLAMVMGVMDCLAEVLATSIARNTSEGLSSSGHDPVDSNAEND
Sbjct: 1201 FHPAAGAEFSSLFSVSYTLAMVMGVMDCLAEVLATSIARNTSEGLSSSGHDPVDSNAEND 1260

Query: 1261 IYYGADEDNMISSSKQEKTNWSANKFSQFPQRNKHLRYRTRVFAAECVSHVPVAVGTEPA 1320
            IYYGADEDNMISSSKQEKTNWSANKFSQFPQRNKHLRYRTRVFAAECVSHVPVAVGTEPA
Sbjct: 1261 IYYGADEDNMISSSKQEKTNWSANKFSQFPQRNKHLRYRTRVFAAECVSHVPVAVGTEPA 1320

Query: 1321 HFDLLLARSAVAEGVHLSNDWLILKLQELVSLSYQISTGQFEGMQPIGVKLLCLIMDKFG 1380
            HFDLLLARSAVAEGVHLSNDWLILKLQELVSLSYQISTGQFEGMQPIGVKLLCLIMDKFG
Sbjct: 1321 HFDLLLARSAVAEGVHLSNDWLILKLQELVSLSYQISTGQFEGMQPIGVKLLCLIMDKFG 1380

Query: 1381 MAVDPEFPGHILLEQFQAQLVSAVRTAISTASSPLLLEAGLELATKVMTSSVIGGDRVAL 1440
            MAVDPEFPGHILLEQFQAQLVSAVRTAISTASSPLLLEAGLELATKVMTSSVIGGDRVAL
Sbjct: 1381 MAVDPEFPGHILLEQFQAQLVSAVRTAISTASSPLLLEAGLELATKVMTSSVIGGDRVAL 1440

Query: 1441 NRLFLLICRPLNDIEDLFYPSFADWVVLKCYTYQFLRMKENIPDEHQQXXXXXXXXXXXX 1500
            NRLFLLICRPLNDIEDLFYPSFADWVVLKCYTYQFLRMKENIPDEHQQ            
Sbjct: 1441 NRLFLLICRPLNDIEDLFYPSFADWVVLKCYTYQFLRMKENIPDEHQQLAPLLANSSSLL 1500

Query: 1501 GKYWIGALKDYSSISFGLHSRINHKPFLDGIQSFLVSSKAKEYLDEVWALILQATALDAA 1560
            GKYWIGALKDYSSISFGLHSRINHKPFLDGIQSFLVSSKAKEYLDEVWALILQATALDAA
Sbjct: 1501 GKYWIGALKDYSSISFGLHSRINHKPFLDGIQSFLVSSKAKEYLDEVWALILQATALDAA 1560

Query: 1561 PLEFEMDDSEDTLGQTFISGHSMVKLNLTEFKFLWGLSVLVLCHTQPSMSNSAIKINLDR 1620
            PLEFEMDDSEDTLGQTFISGHSMVKLNLTEFKFLWGLSVLVLCHTQPSMSNSAIKINLDR
Sbjct: 1561 PLEFEMDDSEDTLGQTFISGHSMVKLNLTEFKFLWGLSVLVLCHTQPSMSNSAIKINLDR 1620

Query: 1621 NNEKKIGGLVVCAGLDNPRPCDQMLLVLSSLTSQVFFSMNFLTVDTCQELLQALTYADCS 1680
            NNEKKIGGLVVCAGLDNPRPCDQMLLVLSSLTSQVFFSMNFLTVDTCQELLQALTYADCS
Sbjct: 1621 NNEKKIGGLVVCAGLDNPRPCDQMLLVLSSLTSQVFFSMNFLTVDTCQELLQALTYADCS 1680

Query: 1681 SAPVVCLFSQIIRLCPDNXXXXXXXXXXALEFYSWYLATILQSRCGSSQECLSNSLISEL 1740
            SAPVVCLFSQIIRLCPDN          ALEFYSWYLATILQSRCGSSQECLSNSLISEL
Sbjct: 1681 SAPVVCLFSQIIRLCPDNFFEVEEFVFVALEFYSWYLATILQSRCGSSQECLSNSLISEL 1740

Query: 1741 SVATETMACRMKNEHWWKLMMLLVSTSYQSFQQVPSNLCLSNIISFLQNTLPIMKKYLQE 1800
            SVATETMACRMKNEHWWKLMMLLVSTSYQSFQQVPSNLCLSNIISFLQNTLPIMKKYLQE
Sbjct: 1741 SVATETMACRMKNEHWWKLMMLLVSTSYQSFQQVPSNLCLSNIISFLQNTLPIMKKYLQE 1800

Query: 1801 RAEPGDECANCEVALGALVSLVAYLCTQCSNRISMLDNKISDSYKLLAKILYFCLGEAIA 1860
            RAEPGDECANCEVALGALVSLVAYLCTQCSNRISMLDNKISDSYKLLAKILYFCLGEAIA
Sbjct: 1801 RAEPGDECANCEVALGALVSLVAYLCTQCSNRISMLDNKISDSYKLLAKILYFCLGEAIA 1860

Query: 1861 LAKLVDEIGYHGENCTSNELMSGSFRHCTQVVQASLCSTTIQVQMLGVHVLKVSAQRELA 1920
            LAKLVDEIGYHGENCTSNELMSGSFRHCTQVVQASLCSTTIQVQMLGVHVLKVSAQRELA
Sbjct: 1861 LAKLVDEIGYHGENCTSNELMSGSFRHCTQVVQASLCSTTIQVQMLGVHVLKVSAQRELA 1920

Query: 1921 EGSQTATHSFMVLFVELLADVFSVIQTALKIRWHSLTTLFLQGCSSKDSVSVIDECLKLL 1980
            EGSQTATHSFMVLFVELLADVFSVIQTALKIRWHSLTTLFLQGCSSKDSVSVIDECLKLL
Sbjct: 1921 EGSQTATHSFMVLFVELLADVFSVIQTALKIRWHSLTTLFLQGCSSKDSVSVIDECLKLL 1980

Query: 1981 FLFHSLAQSKKCPQEATMLLLDALLMVFYSSSATGSQELTEVNNISKKLFSHFIQIPSAA 2040
            FLFHSLAQSKKCPQEATMLLLDALLMVFYSSSATGSQELTEVNNISKKLFSHFIQIPSAA
Sbjct: 1981 FLFHSLAQSKKCPQEATMLLLDALLMVFYSSSATGSQELTEVNNISKKLFSHFIQIPSAA 2040

Query: 2041 IHIKDIMLSAAPTKRQLLQDMIRASVTQGQTIVPGHISANSEQNAQGGFSQEPGLNATDA 2100
            IHIKDIMLSAAPTKRQLLQDMIRASVTQGQTIVPGHISANSEQNAQGGFSQEPGLNATDA
Sbjct: 2041 IHIKDIMLSAAPTKRQLLQDMIRASVTQGQTIVPGHISANSEQNAQGGFSQEPGLNATDA 2100

Query: 2101 DEEKNEKQVSXXXXXXXXXNFQSLPAHGTNNGADSATAASPLPEQGSVASPHDEQIPQVN 2160
            DEEKNEKQVS         NFQSLPAHGTNNGADSATAASPLPEQGSVASPHDEQIPQVN
Sbjct: 2101 DEEKNEKQVSDDDWDDDWDNFQSLPAHGTNNGADSATAASPLPEQGSVASPHDEQIPQVN 2160

Query: 2161 INQEVSDVDVSDGTTEGLSSFDKYLKEPSTSHFSDTAQQVESKSQEFSCKDHEESPKHPK 2220
            INQEVSDVDVSDGTTEGLSSFDKYLKEPSTSHFSDTAQQVESKSQEFSCKDHEESPKHPK
Sbjct: 2161 INQEVSDVDVSDGTTEGLSSFDKYLKEPSTSHFSDTAQQVESKSQEFSCKDHEESPKHPK 2220

Query: 2221 VHCTGSSAHVTKEETDDESQQIHGDQFVSRESKNYDLYLSNEIAGSAGEEENDTSGEIRR 2280
            VHCTGSSAHVTKEETDDESQQIHGDQFVSRESKNYDLYLSNEIAGSAGEEENDTSGEIRR
Sbjct: 2221 VHCTGSSAHVTKEETDDESQQIHGDQFVSRESKNYDLYLSNEIAGSAGEEENDTSGEIRR 2280

Query: 2281 ATGDALDENISSVDDSNLNNISDGTEDKSNKACDKVLVANEKSETVITDSGEKVSASSDE 2340
            ATGDALDENISSVDDSNLNNISDGTEDKSNKACDKVLVANEKSETVITDSGEKVSASSDE
Sbjct: 2281 ATGDALDENISSVDDSNLNNISDGTEDKSNKACDKVLVANEKSETVITDSGEKVSASSDE 2340

Query: 2341 VKSDLYPENVDTKP 2354
            VKSDLYPENVDTKP
Sbjct: 2341 VKSDLYPENVDTKP 2354



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.132    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 71,713,099
Number of extensions: 2810248
Number of successful extensions: 7515
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7511
Number of HSP's successfully gapped: 1
Length of query: 2366
Length of database: 17,035,801
Length adjustment: 117
Effective length of query: 2249
Effective length of database: 10,926,763
Effective search space: 24574289987
Effective search space used: 24574289987
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 164 (67.8 bits)