Os06g0499000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0499000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.89 | 0.21 | 11.4 | -0.166 | 0.589 | 0.388 | -0.208 | -0.443 | -0.166 | 19.4 | 25.5 | 225 | -- | -- |
| 20.37 | 0.21 | 11.4 | -0.0472 | 0.607 | 0.362 | -0.334 | -- | -0.125 | 19.4 | 25.5 | 224 | -- | -- |
| 19.99 | 0.208 | 11.4 | -0.17 | 0.59 | 0.386 | -- | -0.48 | -0.167 | 19.5 | 25.5 | 221 | -- | -- |
| 20.65 | 0.212 | 11.4 | -0.0402 | 0.599 | 0.365 | -- | -- | -0.125 | 19.5 | 25.59 | 221 | -- | -- |
| 29.15 | 0.251 | 11.4 | -0.356 | -- | 0.776 | -- | -0.81 | -0.27 | -- | 25.8 | 425 | -- | -- |
| 26.87 | 0.243 | 11.3 | 0.0597 | 0.835 | -- | -0.384 | -- | 0.0317 | 18.6 | -- | -- | -- | -- |
| 27.24 | 0.244 | 11.3 | 0.0653 | 0.834 | -- | -- | -- | 0.0305 | 18.6 | -- | -- | -- | -- |
| 30.59 | 0.258 | 11.4 | -0.15 | -- | 0.729 | -- | -- | -0.211 | -- | 25.88 | 418 | -- | -- |
| 20.69 | 0.212 | 11.4 | -- | 0.603 | 0.359 | -- | -- | -0.118 | 19.5 | 25.56 | 221 | -- | -- |
| 63.48 | 0.372 | 11.3 | 0.0454 | -- | -- | -- | -- | 0.0136 | -- | -- | -- | -- | -- |
| 27.35 | 0.245 | 11.3 | -- | 0.833 | -- | -- | -- | 0.0232 | 18.6 | -- | -- | -- | -- |
| 31.16 | 0.26 | 11.4 | -- | -- | 0.71 | -- | -- | -0.189 | -- | 25.9 | 414 | -- | -- |
| 63.54 | 0.372 | 11.3 | -- | -- | -- | -- | -- | 0.00859 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.40 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 10 | 19.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 13 | 20.02 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 19 |
| 18 | 20.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 16 |
| 92 | 20.79 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 112 | 20.89 | temperature | 20 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 119 | 20.91 | temperature | 20 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 121 | 20.91 | temperature | 25 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 132 | 20.93 | radiation | 1 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 134 | 20.94 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 138 | 20.95 | temperature | 10 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 154 | 20.97 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 165 | 20.98 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 167 | 20.98 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 177 | 20.99 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 179 | 20.99 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 205 | 21.01 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 206 | 21.01 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 231 | 21.02 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 437 | 21.09 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 23 |
| 486 | 21.11 | temperature | 20 | 14400 | < th | dose independent | sin | 11 | NA |
| 490 | 21.11 | temperature | 25 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 535 | 21.12 | temperature | 25 | 14400 | < th | dose dependent | sin | 10 | NA |
| 554 | 21.13 | temperature | 20 | 14400 | > th | dose independent | sin | 11 | NA |
| 556 | 21.13 | temperature | 25 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 646 | 21.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 20 |