Os06g0364500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0364500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 195.66 | 0.657 | 7.06 | -0.75 | 0.999 | -0.142 | -0.641 | -4.27 | -0.838 | 9.61 | 0.2069 | 4359 | -- | -- |
| 196.08 | 0.652 | 6.99 | -0.587 | 1.09 | -1.08 | -0.468 | -- | -0.836 | 9.66 | 0.7718 | 16803 | -- | -- |
| 197.01 | 0.654 | 7.06 | -0.81 | 0.998 | -0.127 | -- | -4.19 | -0.833 | 9.62 | 0.282 | 4082 | -- | -- |
| 196.21 | 0.652 | 7 | -0.578 | 1 | -1.16 | -- | -- | -0.908 | 9.69 | 0.5 | 16812 | -- | -- |
| 255.03 | 0.744 | 7.14 | -0.972 | -- | 0.4 | -- | -6.39 | -0.83 | -- | 0.4323 | 3664 | -- | -- |
| 226.11 | 0.705 | 6.97 | -0.998 | 1 | -- | -0.601 | -- | -0.789 | 9.67 | -- | -- | -- | -- |
| 227.47 | 0.706 | 6.97 | -1.02 | 1.01 | -- | -- | -- | -0.79 | 9.69 | -- | -- | -- | -- |
| 255.58 | 0.745 | 7.02 | -0.567 | -- | -1.19 | -- | -- | -0.892 | -- | 0.5 | 16192 | -- | -- |
| 200.7 | 0.66 | 6.99 | -- | 1.01 | -1.32 | -- | -- | -0.883 | 9.79 | 0.9145 | 21252 | -- | -- |
| 287.69 | 0.793 | 7 | -1.03 | -- | -- | -- | -- | -0.788 | -- | -- | -- | -- | -- |
| 254.93 | 0.747 | 6.95 | -- | 1.01 | -- | -- | -- | -0.676 | 9.77 | -- | -- | -- | -- |
| 260.18 | 0.751 | 7.02 | -- | -- | -1.31 | -- | -- | -0.883 | -- | 0.9787 | 21958 | -- | -- |
| 315.66 | 0.829 | 6.97 | -- | -- | -- | -- | -- | -0.674 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.94 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 2 | 165.39 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 4 | 165.98 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 5 | 166.82 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 13 | 168.55 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 14 | 168.75 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 32 | 172.30 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 9 |
| 43 | 173.54 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 63 | 175.72 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 82 | 177.68 | wind | 1.0 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 109 | 179.34 | wind | 1.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 120 | 180.12 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 136 | 180.77 | wind | 1.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 349 | 185.93 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 368 | 186.41 | wind | 3.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 412 | 187.04 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 416 | 187.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 417 | 187.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 422 | 187.20 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 438 | 187.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 441 | 187.30 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 15 |
| 442 | 187.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 443 | 187.31 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 444 | 187.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 479 | 187.72 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 20 |
| 482 | 187.79 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 22 |
| 485 | 187.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 14 |
| 496 | 188.02 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 499 | 188.06 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 22 |
| 509 | 188.12 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 18 |
| 525 | 188.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 11 |
| 526 | 188.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 11 |
| 532 | 188.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 11 |
| 534 | 188.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 547 | 188.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 14 |
| 552 | 188.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 553 | 188.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 14 |
| 584 | 188.80 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 13 |
| 587 | 188.82 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 7 | 6 |
| 596 | 188.84 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 604 | 188.86 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 20 |
| 609 | 188.88 | humidity | 80.0 | 720 | > th | dose independent | rect. | 7 | 6 |
| 623 | 188.94 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 18 |
| 643 | 189.06 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 674 | 189.22 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 15 |
| 699 | 189.37 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 701 | 189.38 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 20 |
| 707 | 189.41 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 18 |
| 717 | 189.48 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 725 | 189.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 12 |
| 736 | 189.55 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 18 |
| 749 | 189.63 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 22 |
| 760 | 189.69 | wind | 1.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 771 | 189.75 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 15 | 20 |
| 780 | 189.79 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 9 | 11 |
| 809 | 189.93 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 10 |
| 869 | 190.24 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 875 | 190.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 879 | 190.28 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 882 | 190.29 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 22 |
| 891 | 190.33 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 14 | 18 |
| 903 | 190.38 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 926 | 190.42 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 22 |
| 927 | 190.43 | humidity | 80.0 | 720 | > th | dose independent | rect. | 24 | 14 |
| 963 | 190.58 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 13 | 4 |