BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0364500 Os06g0364500|AK107497
         (327 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G11915.1  | chr1:4021830-4023084 FORWARD LENGTH=330            313   6e-86
AT3G17350.1  | chr3:5934111-5935276 FORWARD LENGTH=302            104   8e-23
AT1G10380.1  | chr1:3400706-3402110 FORWARD LENGTH=306             95   5e-20
AT5G50290.1  | chr5:20461814-20463896 FORWARD LENGTH=304           91   7e-19

>AT1G11915.1 | chr1:4021830-4023084 FORWARD LENGTH=330
          Length = 329

 Score =  313 bits (803), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 167/330 (50%), Positives = 223/330 (67%), Gaps = 9/330 (2%)

Query: 3   IHLHLHFLAILVVVPMLGSPAAG--GLCRDSCGGIPVRYPLSIDDGCGSPYYRNMLTCAD 60
           +H ++ F ++L+ + +  S  +    LCR SCG IP+ YP SIDDGCGSPYYR+ML C+D
Sbjct: 4   LHSYIIFFSLLMTILLQSSTTSSQSNLCRSSCGNIPINYPFSIDDGCGSPYYRHMLICSD 63

Query: 61  NAT-LRLRTPSGTYPVVGADYADPHLVVTDPSMWTCERPFTSVRAAPFSLDTSTRFSLSP 119
           N T L LRTPSG YPV    Y+DPHL+V+DP MW C+          FS+D+ST F++SP
Sbjct: 64  NDTKLELRTPSGKYPVKSISYSDPHLLVSDPFMWNCQDRDNFRPTRSFSIDSSTHFTVSP 123

Query: 120 RNDYLFFDCDEERVIVEPRPAVCDRYPERCDSTCDSAGYLCRNLPGCRGALEENNMSCCA 179
           +NDYLFF+C+ ++VIVEP+P  C+R+P+RCDS+CDS+ YLCR+LP C  AL  + +SCC+
Sbjct: 124 QNDYLFFNCNTDKVIVEPKPLFCERFPDRCDSSCDSSSYLCRHLPECGSAL-GSRVSCCS 182

Query: 180 YRPRAAESLRLMLRHCESYTSVYWRAVGDKFPPYDQVPAYGVRVDFEIPVTTRCLQCEDR 239
           Y P+A +SLRLML+ C +YTSVYWR+ G +  PYDQ P YG+RVD+E PVT +CL C++ 
Sbjct: 183 YYPKATQSLRLMLQDCATYTSVYWRSTGVENAPYDQFPEYGIRVDYEFPVTMKCLLCQET 242

Query: 240 RRGAGGTCGFDPVTRDFVCICNDARNSTTDCADGPASRYHXX--XXXXXXXXXXXXXXXX 297
            +G GG CGF+  TRDF+C+C    N TT C D P+   H                    
Sbjct: 243 TKG-GGVCGFNTRTRDFLCLCKQG-NVTTYCKD-PSLVNHKRVGAIAGTVTAVSAAGAIG 299

Query: 298 XXTGLVWYIRKIKSTKVVTCGVQSNENRFF 327
              G+ WY+RK+++   VTCGVQSNENR F
Sbjct: 300 VAGGVYWYLRKVRANAPVTCGVQSNENRIF 329



>AT3G17350.1 | chr3:5934111-5935276 FORWARD LENGTH=302
          Length = 301

 Score =  104 bits (259), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 116/264 (43%), Gaps = 23/264 (8%)

Query: 23  AAGGLCRDSCGGIPVRYPLSIDDGCGSPYYRNMLTCADNATLRLRTPSGTYPVVGADYAD 82
           +A   CR  CG IP+ YP  ID GCGSP YR M  C+ +  L   TPSG+Y V   DY  
Sbjct: 26  SAATSCRTLCGNIPINYPFGIDGGCGSPQYRGMFNCSTD--LYFTTPSGSYKVQSIDYEK 83

Query: 83  PHLVVTDPSMWTCE--RPFTSVRAAPFSLDTSTRFSLSPRNDYLF--FDCDEERVIVEPR 138
             +V+ DP+M TC   +P    + A    +T  R    P  D +F  F+C  +  +    
Sbjct: 84  KTMVIFDPAMSTCSILQPHHDFKMADIQ-NTLIR----PSYDTVFALFNCSNDSPVHNRY 138

Query: 139 PAVC-DRYPERCD---STCDSAGYLCRNLPGCRGALEENNMSCCAYRPRAAESLRLMLRH 194
             +C +     CD   S+C S        P    +       CC         + + +  
Sbjct: 139 RNLCFNAAGHSCDELYSSCTSFRIFNTTSPYGNNSTVHTTPYCCFTNYDTVRVMSMNILD 198

Query: 195 CESYTSVYWRAVGDKFPPYDQVPAYGVRVDFEIPVTTRCLQCEDRRRGAGGTCGFDPVTR 254
           C  YT+V          P D   +YG+ + + +      + C DR R +GGTCGFD  T 
Sbjct: 199 CSHYTTVIDNGKMRGVGPLDW--SYGIELSYSVTE----IGC-DRCRKSGGTCGFDAETE 251

Query: 255 DFVCICNDARNS-TTDCADGPASR 277
            F+C C+ + N+ T +C  G   R
Sbjct: 252 IFLCQCSGSNNNPTRECGGGMTDR 275



>AT1G10380.1 | chr1:3400706-3402110 FORWARD LENGTH=306
          Length = 305

 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 115/260 (44%), Gaps = 35/260 (13%)

Query: 28  CRDSCGGIPVRYPLSIDDGCGSPYYRNMLTC-ADNATLRLRTPSGTYPVVGADYADPHLV 86
           C+ +CG IP++YPL    GCG P +   +TC  D  TL L T +G+YP+   DYA   + 
Sbjct: 29  CQKTCGQIPIKYPLGTGSGCGDPRFTRYITCDPDQQTLTLTTHTGSYPITSVDYAKQEIY 88

Query: 87  VTDPSMWTCE--RPFTSVRAAPFSLDTSTRFSLSPRNDYLFFDCD-EERVIVEP------ 137
           VTDPSM TC   RP     +  F LD    FS      +   DC  +E  +  P      
Sbjct: 89  VTDPSMSTCACTRP-----SHGFGLDWDAPFSFHDDTVFTLLDCSVDESPVFTPLSNGSG 143

Query: 138 RPAVCDRYPERCDSTCDSAGYLCRNLPGCRGALEENNMSCCAYRPR---AAESLRLMLRH 194
           R ++CDR   +  S C      CR +      +     +CC Y P     +  + L    
Sbjct: 144 RVSLCDR---QSSSICTFLYSNCRAI----SLINLQVSTCCVYVPLDLGPSFEMDLNKLK 196

Query: 195 CESYTSVYWRAVGDKFPPYDQVPAYGVRVDFEIPVTTR----CLQCEDRRRGAGGTCGFD 250
           C SY+  Y    G +  P +    YG+ + ++  V       C  CE     + G CGF+
Sbjct: 197 CSSYSGFYNLGPGQESHPENW--NYGIALKYKFNVFDEYPGVCGSCER----SNGACGFN 250

Query: 251 PVTRDFVCICNDARNSTTDC 270
             +  FVC C    N+T+DC
Sbjct: 251 TQSSSFVCNCPGGINTTSDC 270



>AT5G50290.1 | chr5:20461814-20463896 FORWARD LENGTH=304
          Length = 303

 Score = 91.3 bits (225), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 109/258 (42%), Gaps = 28/258 (10%)

Query: 28  CRDSCGGIPVRYPLSIDDGCGSPYYRNMLTCADNATLRLRTPSGTYPVVGADYADPHLVV 87
           CR  CG I V YP  I +GCG P YR++L C  N  L     SG+Y V+  DYA   + +
Sbjct: 22  CRSYCGNITVDYPFGIRNGCGHPGYRDLLFCM-NDVLMFHISSGSYRVLDIDYAYQSITL 80

Query: 88  TDPSMWTCERPFTSVRAAPFSLDTSTRFSLSPRNDYLFFDCDEERVIVEPRPAVCDRYPE 147
            DP M  CE      +   F  +       +P +D +F       +   P+  +   +PE
Sbjct: 81  HDPHMSNCETIVLGGKGNGFEAEDWRTPYFNPTSDNVFM-----LIGCSPKSPIFQGFPE 135

Query: 148 RCDSTCDSAGYLCRNLPGC-----RGALEENNMS------CCAYRPRAAESLRLMLRHCE 196
           +     + +G  C     C      G  +    S      CC     + +++ L    CE
Sbjct: 136 KKVPCRNISGMSCEEYMSCPAWDMVGYRQPGIHSGSGPPMCCGVGFESVKAINLSKLECE 195

Query: 197 SYTSVYWRAVGDKFPPYDQVPAYGVRVDFEIPVT-TRCLQCEDRRRGAGGTCGFDPVTRD 255
            Y+S Y  A      P D   AYG+RV +E+  +   C  C        GTCG++P    
Sbjct: 196 GYSSAYNLAPLKLRGPSDW--AYGIRVKYELQGSDAFCRACV----ATSGTCGYEPADGG 249

Query: 256 ---FVCICNDARNSTTDC 270
               VC+C D  NSTT+C
Sbjct: 250 GLRHVCMC-DNHNSTTNC 266



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.325    0.140    0.466 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,702,022
Number of extensions: 330542
Number of successful extensions: 674
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 663
Number of HSP's successfully gapped: 4
Length of query: 327
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 228
Effective length of database: 8,392,385
Effective search space: 1913463780
Effective search space used: 1913463780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 112 (47.8 bits)