Os06g0328800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF23 family protein.
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Os06g0328800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF23 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 339.55 | 0.866 | 7.54 | -1.89 | 0.7 | 2.12 | 0.377 | -0.882 | -0.055 | 21.2 | 22.61 | 1263 | -- | -- |
| 340 | 0.859 | 7.51 | -1.64 | 0.712 | 2.05 | 0.322 | -- | 0.0139 | 21.1 | 22.48 | 1274 | -- | -- |
| 339.96 | 0.859 | 7.53 | -1.88 | 0.711 | 2.11 | -- | -0.842 | -0.0412 | 21 | 22.8 | 1274 | -- | -- |
| 340.39 | 0.859 | 7.51 | -1.65 | 0.708 | 2.06 | -- | -- | 0.00709 | 21 | 22.48 | 1267 | -- | -- |
| 353.43 | 0.876 | 7.48 | -1.55 | -- | 2.45 | -- | 0.575 | -0.00841 | -- | 20.95 | 951 | -- | -- |
| 480.47 | 1.03 | 7.41 | -0.933 | 0.869 | -- | 0.728 | -- | 0.442 | 22.6 | -- | -- | -- | -- |
| 482.57 | 1.03 | 7.41 | -0.961 | 0.869 | -- | -- | -- | 0.441 | 22.4 | -- | -- | -- | -- |
| 353.49 | 0.876 | 7.5 | -1.68 | -- | 2.44 | -- | -- | -0.0337 | -- | 21.4 | 969 | -- | -- |
| 406 | 0.938 | 7.46 | -- | 0.728 | 1.66 | -- | -- | 0.272 | 21.1 | 22.8 | 1252 | -- | -- |
| 528.68 | 1.07 | 7.39 | -0.947 | -- | -- | -- | -- | 0.444 | -- | -- | -- | -- | -- |
| 506.9 | 1.05 | 7.39 | -- | 0.863 | -- | -- | -- | 0.548 | 22.3 | -- | -- | -- | -- |
| 421.19 | 0.956 | 7.44 | -- | -- | 2.03 | -- | -- | 0.244 | -- | 22.2 | 951 | -- | -- |
| 552.31 | 1.1 | 7.37 | -- | -- | -- | -- | -- | 0.549 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 334.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 11 | 337.08 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 64 | 341.55 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 133 | 343.32 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 147 | 343.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 170 | 344.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 219 | 344.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 286 | 344.98 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 289 | 345.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 291 | 345.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 491 | 346.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 529 | 347.09 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 667 | 347.74 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 777 | 348.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 16 |
| 838 | 348.53 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 973 | 349.32 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 987 | 349.44 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 20 |