Os06g0318300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Rho GDP-dissociation inhibitor 1 (Rho GDI-1) (AtRhoGDI1).
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Os06g0318300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Rho GDP-dissociation inhibitor 1 (Rho GDI-1) (AtRhoGDI1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.93 | 0.325 | 8.99 | 0.495 | 0.43 | 1.34 | 0.216 | -1.21 | 0.433 | 9.83 | 25.27 | 5272 | -- | -- |
| 49.25 | 0.327 | 8.97 | 0.774 | 0.398 | 1.21 | 0.254 | -- | 0.359 | 9.86 | 25.3 | 7915 | -- | -- |
| 47.03 | 0.319 | 8.99 | 0.521 | 0.417 | 1.37 | -- | -1.3 | 0.439 | 9.78 | 26 | 5390 | -- | -- |
| 47.85 | 0.322 | 8.97 | 0.84 | 0.445 | 1.25 | -- | -- | 0.422 | 9.54 | 26.3 | 6516 | -- | -- |
| 53.93 | 0.342 | 9.01 | 0.645 | -- | 1.19 | -- | -0.925 | 0.35 | -- | 26.6 | 7256 | -- | -- |
| 96.62 | 0.461 | 8.89 | 1.4 | 0.319 | -- | 0.119 | -- | 0.773 | 9.03 | -- | -- | -- | -- |
| 96.67 | 0.46 | 8.89 | 1.4 | 0.319 | -- | -- | -- | 0.773 | 8.95 | -- | -- | -- | -- |
| 55.26 | 0.346 | 8.98 | 0.858 | -- | 1.15 | -- | -- | 0.399 | -- | 26.4 | 7299 | -- | -- |
| 53.95 | 0.342 | 9.02 | -- | 0.423 | 1.4 | -- | -- | 0.165 | 10.5 | 25.53 | 24957 | -- | -- |
| 102.5 | 0.473 | 8.89 | 1.4 | -- | -- | -- | -- | 0.775 | -- | -- | -- | -- | -- |
| 148.45 | 0.57 | 8.92 | -- | 0.323 | -- | -- | -- | 0.617 | 8.62 | -- | -- | -- | -- |
| 53.74 | 0.341 | 9.05 | -- | -- | 1.45 | -- | -- | 0.0923 | -- | 22.5 | 31771 | -- | -- |
| 154.31 | 0.58 | 8.93 | -- | -- | -- | -- | -- | 0.62 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.82 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 2 | 43.86 | humidity | 90 | 43200 | > th | dose dependent | rect. | 15 | 14 |
| 24 | 44.08 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 29 | 44.12 | humidity | 90 | 43200 | > th | dose dependent | sin | 14 | NA |
| 79 | 44.57 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 82 | 44.59 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 13 |
| 87 | 44.61 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 12 |
| 92 | 44.63 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 93 | 44.64 | temperature | 20 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 94 | 44.64 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 111 | 44.74 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 119 | 44.76 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 4 |
| 139 | 44.81 | temperature | 20 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 160 | 44.86 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 4 |
| 169 | 44.87 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 176 | 44.88 | temperature | 20 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 208 | 44.93 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 220 | 44.95 | temperature | 20 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 226 | 44.96 | humidity | 90 | 43200 | > th | dose independent | sin | 13 | NA |
| 306 | 45.11 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 19 |
| 336 | 45.15 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 350 | 45.17 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 377 | 45.20 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 382 | 45.21 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 22 |
| 420 | 45.29 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 433 | 45.33 | humidity | 90 | 43200 | < th | dose independent | sin | 14 | NA |
| 457 | 45.39 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 4 |
| 470 | 45.41 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 19 |
| 506 | 45.50 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 527 | 45.54 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 539 | 45.57 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 567 | 45.66 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 14 |
| 586 | 45.70 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 594 | 45.72 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 645 | 45.82 | temperature | 20 | 43200 | < th | dose independent | sin | 10 | NA |
| 664 | 45.86 | temperature | 20 | 43200 | > th | dose independent | sin | 10 | NA |
| 741 | 46.04 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 750 | 46.08 | temperature | 25 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 755 | 46.09 | temperature | 25 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 765 | 46.10 | temperature | 20 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 767 | 46.11 | temperature | 20 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 794 | 46.18 | temperature | 20 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 804 | 46.20 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 810 | 46.22 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 826 | 46.24 | temperature | 20 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 858 | 46.30 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 873 | 46.32 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 880 | 46.33 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 887 | 46.35 | temperature | 25 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 907 | 46.38 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 914 | 46.38 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 22 |