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Os06g0297700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.55 (0.0245) R2 : 0.0562
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.269 (0.0516) R2dN8 : 0.0726 R2N8 : 0.0562
σ : 0.461
deviance : 97.63
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.64 0.419 6.54 0.522 0.136 -0.619 0.709 -0.974 0.281 20.4 19.2 790 -- --
81.28 0.42 6.56 0.448 0.135 -0.411 0.815 -- 0.272 20.8 19.2 654 -- --
80.78 0.419 6.53 0.553 0.179 -0.591 -- -1.09 0.308 18.9 19.4 761 -- --
83.68 0.426 6.56 0.393 0.161 -0.442 -- -- 0.258 18.8 19.38 653 -- --
81.97 0.422 6.53 0.525 -- -0.667 -- -1.17 0.281 -- 19.36 679 -- --
85.18 0.433 6.54 0.573 0.184 -- 0.905 -- 0.331 21 -- -- -- --
87.63 0.438 6.54 0.546 0.205 -- -- -- 0.332 19.4 -- -- -- --
84.64 0.428 6.56 0.422 -- -0.346 -- -- 0.222 -- 21.85 676 -- --
87.49 0.436 6.56 -- 0.145 -0.551 -- -- 0.256 18.1 19.5 673 -- --
89.87 0.443 6.54 0.542 -- -- -- -- 0.329 -- -- -- -- --
95.47 0.457 6.56 -- 0.2 -- -- -- 0.271 19.6 -- -- -- --
88.22 0.437 6.57 -- -- -0.615 -- -- 0.188 -- 19.43 644 -- --
97.63 0.461 6.55 -- -- -- -- -- 0.269 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 73.11 temperature 30.0 270 < th dose dependent rect. 7 3
27 75.63 temperature 25.0 270 < th dose independent rect. 7 3
28 75.68 temperature 10.0 270 > th dose dependent rect. 2 15
34 75.96 temperature 20.0 270 > th dose independent rect. 3 15
38 76.09 temperature 10.0 720 > th dose dependent rect. 2 7
45 76.18 temperature 15.0 1440 > th dose independent rect. 8 8
58 76.50 temperature 30.0 90 < th dose independent rect. 7 8
60 76.59 temperature 15.0 1440 > th dose independent rect. 8 6
62 76.64 temperature 15.0 720 > th dose dependent rect. 2 5
66 76.68 temperature 30.0 720 < th dose dependent rect. 24 8
99 76.98 temperature 25.0 720 < th dose dependent rect. 24 3
165 77.34 temperature 30.0 30 < th dose independent rect. 9 6
191 77.45 temperature 15.0 270 > th dose independent rect. 17 9
196 77.46 radiation 10.0 10 < th dose dependent rect. 5 13
211 77.54 radiation 30.0 30 < th dose independent rect. 13 18
212 77.54 temperature 25.0 720 < th dose dependent sin 6 NA
223 77.58 radiation 40.0 10 < th dose dependent rect. 13 20
256 77.70 atmosphere 995.0 270 > th dose independent rect. 2 15
294 77.84 temperature 30.0 30 < th dose independent rect. 9 4
297 77.85 precipitation 0.1 270 < th dose independent rect. 17 9
300 77.85 precipitation 0.1 270 < th dose dependent rect. 17 9
312 77.91 atmosphere 995.0 270 > th dose independent rect. 13 17
349 78.04 radiation 10.0 10 < th dose independent rect. 4 14
359 78.06 radiation 1.0 270 > th dose independent rect. 17 20
366 78.07 radiation 40.0 30 < th dose dependent rect. 13 18
382 78.13 temperature 20.0 720 > th dose independent rect. 2 7
383 78.13 radiation 1.0 270 > th dose independent rect. 17 22
406 78.19 temperature 15.0 1440 > th dose independent rect. 10 4
409 78.19 atmosphere 1000.0 30 > th dose independent rect. 15 16
412 78.19 temperature 10.0 720 > th dose dependent sin 8 NA
418 78.21 wind 1.0 4320 < th dose dependent rect. 14 9
431 78.24 temperature 20.0 720 > th dose independent rect. 4 5
435 78.25 temperature 15.0 1440 > th dose independent rect. 10 6
438 78.26 wind 7.0 270 < th dose independent rect. 17 9
457 78.31 temperature 30.0 30 < th dose independent rect. 18 21
463 78.32 temperature 30.0 30 < th dose independent rect. 20 17
466 78.32 radiation 20.0 90 < th dose dependent rect. 4 14
478 78.35 radiation 40.0 90 < th dose dependent rect. 4 14
479 78.35 temperature 10.0 10 > th dose dependent rect. 4 15
505 78.41 atmosphere 1000.0 30 > th dose independent rect. 13 18
525 78.45 humidity 90.0 10 < th dose independent sin 1 NA
536 78.48 radiation 1.0 30 > th dose independent rect. 7 8
559 78.51 radiation 20.0 270 < th dose independent rect. 17 9
563 78.51 atmosphere 1015.0 270 < th dose independent rect. 2 15
574 78.52 temperature 10.0 270 > th dose dependent rect. 17 9
611 78.58 atmosphere 995.0 270 > th dose independent rect. 11 20
617 78.59 humidity 90.0 10 < th dose independent rect. 7 8
622 78.60 temperature 30.0 30 < th dose independent rect. 18 10
630 78.62 temperature 30.0 270 < th dose independent rect. 18 18
660 78.66 temperature 25.0 4320 > th dose dependent rect. 6 3
690 78.71 temperature 20.0 720 > th dose independent rect. 21 17
713 78.74 wind 1.0 10 > th dose independent rect. 7 8
724 78.75 humidity 90.0 270 > th dose independent rect. 1 5
728 78.76 temperature 20.0 720 > th dose independent sin 6 NA
730 78.76 temperature 15.0 720 > th dose dependent rect. 6 1
734 78.76 wind 1.0 4320 < th dose dependent rect. 11 12
746 78.78 radiation 40.0 90 < th dose dependent rect. 12 6
750 78.79 radiation 40.0 270 < th dose independent rect. 7 4
752 78.79 humidity 50.0 270 > th dose independent rect. 17 9
760 78.80 precipitation 0.1 270 < th dose independent rect. 2 15
764 78.80 precipitation 0.1 270 < th dose dependent rect. 2 15
766 78.81 wind 9.0 270 < th dose independent rect. 2 15
772 78.81 radiation 40.0 270 < th dose dependent rect. 17 9
800 78.86 wind 9.0 14400 < th dose independent rect. 6 4
811 78.87 radiation 40.0 270 < th dose independent rect. 6 7
823 78.88 humidity 60.0 30 > th dose independent rect. 18 10
824 78.88 radiation 20.0 90 < th dose independent rect. 4 14
838 78.90 radiation 1.0 30 > th dose independent rect. 7 6
852 78.91 temperature 20.0 720 > th dose independent rect. 6 1
862 78.91 radiation 1.0 30 < th dose dependent rect. 18 10
879 78.93 temperature 20.0 720 > th dose independent rect. 6 8
881 78.93 humidity 90.0 10 < th dose independent rect. 6 12
884 78.93 temperature 30.0 30 < th dose independent rect. 9 19
894 78.94 radiation 1.0 270 > th dose independent sin 3 NA
916 78.95 temperature 30.0 30 < th dose independent rect. 7 21
926 78.96 wind 9.0 30 < th dose dependent rect. 7 6
947 78.98 atmosphere 1000.0 30 > th dose independent rect. 15 18
957 78.99 temperature 20.0 720 < th dose independent rect. 6 13
960 78.99 radiation 20.0 10 < th dose dependent sin 23 NA
972 79.00 wind 1.0 4320 > th dose independent rect. 14 9
978 79.00 humidity 80.0 270 > th dose dependent rect. 1 6
996 79.02 humidity 90.0 270 > th dose independent rect. 23 7