Os06g0273800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Signal peptidase 18 subunit (Fragment).
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Os06g0273800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Signal peptidase 18 subunit (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.1 | 0.221 | 10.9 | -0.389 | 0.636 | 1.07 | 0.535 | 2.67 | -0.00286 | 4.16 | 0.82 | 1434 | -- | -- |
| 25.7 | 0.236 | 10.9 | -0.212 | 0.552 | 0.452 | 0.461 | -- | 0.0544 | 3.24 | 16.37 | 2443 | -- | -- |
| 22.73 | 0.222 | 10.9 | -0.4 | 0.622 | 1.11 | -- | 2.83 | -0.00929 | 4.58 | 0.7729 | 1455 | -- | -- |
| 26.34 | 0.239 | 10.9 | -0.234 | 0.546 | 0.45 | -- | -- | 0.0544 | 3.16 | 12.83 | 2461 | -- | -- |
| 24.14 | 0.229 | 10.9 | -0.218 | -- | 1.07 | -- | 1.07 | 0.0469 | -- | 2.64 | 1972 | -- | -- |
| 28.53 | 0.25 | 10.9 | -0.239 | 0.613 | -- | 0.42 | -- | -0.0318 | 4.31 | -- | -- | -- | -- |
| 29.01 | 0.252 | 10.9 | -0.243 | 0.617 | -- | -- | -- | -0.0341 | 4.37 | -- | -- | -- | -- |
| 25.38 | 0.235 | 10.9 | -0.131 | -- | 1.06 | -- | -- | 0.0718 | -- | 3.358 | 1972 | -- | -- |
| 26.39 | 0.239 | 10.9 | -- | 0.628 | 0.327 | -- | -- | 0.0717 | 4.28 | 68.44 | 1445 | -- | -- |
| 49.46 | 0.329 | 10.9 | -0.218 | -- | -- | -- | -- | -0.0177 | -- | -- | -- | -- | -- |
| 30.56 | 0.259 | 10.9 | -- | 0.612 | -- | -- | -- | -0.00706 | 4.38 | -- | -- | -- | -- |
| 25.9 | 0.237 | 10.9 | -- | -- | 1.07 | -- | -- | 0.0892 | -- | 3.13 | 1975 | -- | -- |
| 50.71 | 0.332 | 10.9 | -- | -- | -- | -- | -- | 0.00647 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.04 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 5 | 21.10 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 16 | 21.15 | temperature | 20 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 21 | 21.16 | temperature | 20 | 14400 | > th | dose independent | rect. | 13 | 15 |
| 30 | 21.18 | temperature | 20 | 14400 | > th | dose independent | sin | 14 | NA |
| 52 | 21.22 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 68 | 21.24 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 91 | 21.26 | temperature | 20 | 14400 | < th | dose independent | sin | 15 | NA |
| 106 | 21.29 | temperature | 20 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 249 | 21.49 | temperature | 25 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 268 | 21.52 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 285 | 21.53 | temperature | 25 | 14400 | < th | dose dependent | rect. | 12 | 14 |
| 334 | 21.56 | temperature | 25 | 14400 | < th | dose dependent | sin | 17 | NA |
| 368 | 21.59 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |
| 381 | 21.59 | temperature | 20 | 14400 | > th | dose independent | rect. | 3 | 23 |
| 417 | 21.61 | temperature | 25 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 472 | 21.64 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 23 |
| 553 | 21.69 | temperature | 20 | 14400 | < th | dose independent | no | NA | NA |
| 561 | 21.69 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 597 | 21.71 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 617 | 21.72 | temperature | 25 | 14400 | < th | dose dependent | rect. | 1 | 22 |
| 625 | 21.73 | temperature | 25 | 14400 | < th | dose dependent | no | NA | NA |
| 661 | 21.74 | temperature | 25 | 14400 | < th | dose dependent | rect. | 16 | 23 |
| 663 | 21.74 | temperature | 25 | 14400 | < th | dose dependent | rect. | 20 | 23 |
| 676 | 21.75 | temperature | 10 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 704 | 21.76 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 719 | 21.77 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 726 | 21.77 | temperature | 25 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 847 | 21.84 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 923 | 21.88 | temperature | 25 | 14400 | < th | dose dependent | sin | 2 | NA |
| 982 | 21.91 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 997 | 21.92 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |