Os06g0269300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Soluble quinoprotein glucose dehydrogenase domain containing protein.
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Os06g0269300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Soluble quinoprotein glucose dehydrogenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.67 | 0.398 | 10.2 | -0.42 | 0.943 | -0.585 | 0.294 | -1.63 | 0.12 | 20.4 | 4.63 | 11942 | -- | -- |
| 76.5 | 0.407 | 10.2 | -0.178 | 0.974 | -0.547 | 0.11 | -- | 0.127 | 20.5 | 21.86 | 12612 | -- | -- |
| 71.5 | 0.394 | 10.2 | -0.438 | 0.959 | -0.576 | -- | -1.59 | 0.12 | 20.2 | 3.55 | 11922 | -- | -- |
| 75.13 | 0.404 | 10.2 | -0.0208 | 0.829 | -0.655 | -- | -- | 0.223 | 20.3 | 10 | 11856 | -- | -- |
| 111.83 | 0.495 | 10.2 | -0.148 | -- | -0.42 | -- | -0.757 | 0.0421 | -- | 3.55 | 11922 | -- | -- |
| 87.74 | 0.439 | 10.2 | -0.117 | 0.911 | -- | 0.432 | -- | 0.0199 | 20.8 | -- | -- | -- | -- |
| 88.29 | 0.44 | 10.2 | -0.129 | 0.914 | -- | -- | -- | 0.0207 | 20.6 | -- | -- | -- | -- |
| 115.49 | 0.503 | 10.2 | -0.15 | -- | -0.424 | -- | -- | 0.0444 | -- | 3.55 | 11922 | -- | -- |
| 74.73 | 0.403 | 10.2 | -- | 0.852 | -0.624 | -- | -- | 0.237 | 20.5 | 10 | 11858 | -- | -- |
| 135.33 | 0.544 | 10.2 | -0.132 | -- | -- | -- | -- | 0.0126 | -- | -- | -- | -- | -- |
| 88.73 | 0.441 | 10.2 | -- | 0.915 | -- | -- | -- | 0.0351 | 20.6 | -- | -- | -- | -- |
| 116.09 | 0.503 | 10.2 | -- | -- | -0.423 | -- | -- | 0.0609 | -- | 3.55 | 11922 | -- | -- |
| 135.79 | 0.544 | 10.2 | -- | -- | -- | -- | -- | 0.0272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.17 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 2 | 70.56 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 3 | 70.63 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 4 | 70.71 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 3 |
| 12 | 71.12 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 19 | 71.39 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 20 | 71.39 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 5 |
| 21 | 71.43 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 3 |
| 26 | 71.51 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 38 | 71.74 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 58 | 71.97 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 20 |
| 64 | 72.02 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 65 | 72.03 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 68 | 72.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 17 |
| 70 | 72.10 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 80 | 72.15 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 84 | 72.18 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 88 | 72.19 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 107 | 72.21 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 115 | 72.23 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 132 | 72.24 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 136 | 72.25 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 140 | 72.26 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 21 | 13 |
| 146 | 72.27 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 149 | 72.28 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 17 |
| 155 | 72.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 13 |
| 159 | 72.31 | temperature | 30.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 160 | 72.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 17 |
| 162 | 72.31 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 17 |
| 169 | 72.32 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 1 | NA |
| 173 | 72.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 181 | 72.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 183 | 72.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 19 |
| 184 | 72.35 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 186 | 72.35 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 191 | 72.35 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 18 | 19 |
| 194 | 72.36 | temperature | 30.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 195 | 72.36 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 219 | 72.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 229 | 72.36 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 21 |
| 232 | 72.37 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 235 | 72.37 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 7 |
| 239 | 72.38 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 266 | 72.40 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 270 | 72.40 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 298 | 72.42 | temperature | 30.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 319 | 72.44 | temperature | 10.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 320 | 72.44 | precipitation | 0.1 | 43200 | > th | dose dependent | no | NA | NA |
| 327 | 72.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 23 |
| 328 | 72.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 23 |
| 382 | 72.50 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 450 | 72.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 456 | 72.55 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 599 | 72.63 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 13 | NA |
| 617 | 72.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 637 | 72.65 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 645 | 72.66 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 660 | 72.67 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 684 | 72.68 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 786 | 72.69 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 806 | 72.70 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 807 | 72.70 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 5 | 13 |
| 809 | 72.70 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 823 | 72.71 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 894 | 72.72 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 895 | 72.72 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 23 |
| 896 | 72.72 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 23 | 23 |
| 908 | 72.73 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |