BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0269300 Os06g0269300|AK122070
(517 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G70280.2 | chr1:26466086-26468471 REVERSE LENGTH=510 466 e-131
AT1G23880.1 | chr1:8436125-8438636 FORWARD LENGTH=546 413 e-115
AT5G14890.1 | chr5:4818056-4821534 FORWARD LENGTH=755 355 2e-98
AT3G14860.2 | chr3:4998591-5000894 REVERSE LENGTH=494 236 2e-62
AT1G23890.2 | chr1:8438900-8440803 REVERSE LENGTH=401 157 1e-38
>AT1G70280.2 | chr1:26466086-26468471 REVERSE LENGTH=510
Length = 509
Score = 466 bits (1199), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/453 (53%), Positives = 309/453 (68%), Gaps = 24/453 (5%)
Query: 36 PAKVVTGLLSSTASAVVKQLWSLKXXXXXXXXXXXXXXMVKYEGGYAVETVFDGSKLGIE 95
PAK++ G +S+ S+++K LWSLK MVK+E GY+VETVFDGSKLGIE
Sbjct: 28 PAKILNGFISNHGSSLMKWLWSLKTTTKTTIATRS---MVKFENGYSVETVFDGSKLGIE 84
Query: 96 PHDVEVTPSGELLVLDSMNSNVYRVQLPLSRYSRPKLVAGSPEGLSGHVDGRLREAKMNH 155
P+ +EV P+GELL+LDS NSN+Y++ LS YSRP+LV GSPEG GHVDGRLR+AK+NH
Sbjct: 85 PYSIEVLPNGELLILDSENSNIYKISSSLSLYSRPRLVTGSPEGYPGHVDGRLRDAKLNH 144
Query: 156 PKGFTVDDRGNIYVADAMNMAIRKISDTGVTTIAGGKSMR-GGHLDGPSDDAKFSTDFEI 214
PKG TVDDRGNIYVAD +N AIRKIS+ GVTTIAGGK++R GGH+DGPS+DAKFS DF++
Sbjct: 145 PKGLTVDDRGNIYVADTVNNAIRKISEGGVTTIAGGKTVRNGGHVDGPSEDAKFSNDFDV 204
Query: 215 RYISSSCSLLVIDRGNQAIREIALHNDDCEYQYEAGFPLGIALLFAAGFFGYMLALLQRQ 274
Y+ SSCSLLVIDRGN+AIREI LH DDC YQY +GFPLGIA+L AAGFFGYMLALLQR+
Sbjct: 205 VYVGSSCSLLVIDRGNKAIREIQLHFDDCAYQYGSGFPLGIAVLVAAGFFGYMLALLQRR 264
Query: 275 VLGMVSTADEPQTPPRPSIASIPPYQKPLKPSLRPPLIPTEDQAGKHEAEEGFFTSIGKL 334
V +VS+ ++ + + P QKP+K S RP LIP D+ + + EE F S+GKL
Sbjct: 265 VGSIVSSHNDQE------MFEADPDQKPMKHS-RPSLIPAGDEQLEKQ-EETFVVSLGKL 316
Query: 335 IGGAKSSAVEIFSRKKRPT--HQYHHHLQQQRA----NPWPVQESYAIPHDETPPPLDMR 388
+ A S +EI +K+ T QYH +Q A PWP+QES+ I ++ PPP++ R
Sbjct: 317 VSNAWESVMEILRKKQTGTSFQQYHGTTKQSAAFSTSTPWPIQESFVIRDEDGPPPVEPR 376
Query: 389 AATPRKNYAFMTKEPEKVHHVRHGRPYFNGWDMX------XXXXXXXXXXXXXXXXXXXX 442
TPRK YAFM+K+ EK+ +R R +++ WD
Sbjct: 377 NPTPRKTYAFMSKDAEKMQQLRQSRAFYSSWDAEFPNQQQQQQKQHQKHQHQQQQQQQHR 436
Query: 443 XXYSAGPQTFYEQSCETTNEIVFGAVQEVDTKR 475
YS+ P T+YEQ E +NEIVFGAVQE +KR
Sbjct: 437 RHYSSIPHTYYEQDSEKSNEIVFGAVQEQSSKR 469
>AT1G23880.1 | chr1:8436125-8438636 FORWARD LENGTH=546
Length = 545
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/449 (50%), Positives = 288/449 (64%), Gaps = 27/449 (6%)
Query: 36 PAKVVTGLLSSTASAVVKQLWSLKXXXXXXXXXXXXXXMVKYEGGYAVETVFDGSKLGIE 95
PAK+V +S+ ++++K LWSL MVK+E GY+VETV DGSKLGIE
Sbjct: 88 PAKIVNSFISNHGTSLLKWLWSLSFKTTTKTAVPTKS-MVKFENGYSVETVLDGSKLGIE 146
Query: 96 PHDVEVTPSGELLVLDSMNSNVYRVQLPLSRYSRPKLVAGSPEGLSGHVDGRLREAKMNH 155
P+ ++V +GELL+LDS NSN+Y++ LS YSRP+LV GSPEG GHVDGRLR+A++N+
Sbjct: 147 PYSIQVLSNGELLILDSQNSNIYQISSSLSLYSRPRLVTGSPEGYPGHVDGRLRDARLNN 206
Query: 156 PKGFTVDDRGNIYVADAMNMAIRKISDTGVTTIAGGKSMR-GGHLDGPSDDAKFSTDFEI 214
PKG TVDDRGNIYVAD +N AIRKIS+ GVTTIAGGK +R GGH+DGPS+DAKFS DF++
Sbjct: 207 PKGLTVDDRGNIYVADTVNNAIRKISEAGVTTIAGGKMVRGGGHVDGPSEDAKFSNDFDV 266
Query: 215 RYISSSCSLLVIDRGNQAIREIALHNDDCEYQYEAGFPLGIALLFAAGFFGYMLALLQRQ 274
Y+ SSCSLLVIDRGNQAIREI LH DDC QY +GFPLGIA+L AA FFGYMLALLQR+
Sbjct: 267 VYLGSSCSLLVIDRGNQAIREIQLHFDDCADQYGSGFPLGIAVLVAAVFFGYMLALLQRR 326
Query: 275 VLGMVSTADEPQTPPRPSIASIPPYQKPLKPSLRPPLIPTEDQAGKHEAEEGFFTSIGKL 334
+ +VS + + + P Q P+KP +RPPLI T D+ K EE F ++
Sbjct: 327 LSSIVSYHTDQE------VFEAVPDQDPIKP-VRPPLILTGDEQEKQ--EESFLGTLQIF 377
Query: 335 IGGAKSSAVEIFS------RKKRPTHQYHHHLQQQRA----NPWPVQESYAIPHDETPPP 384
I A +VE+FS RKK+ +H + + + WP+QES+ I + + PPP
Sbjct: 378 ISNAWVFSVELFSGMFPGLRKKQTVGLNFNHQETKHSAFSTTSWPIQESFVIHNKDEPPP 437
Query: 385 LDMRAATPRKNYAFMTKEP-EKVHHVRHGRPYFNGWDMXXXXXXXXXXXXXXXXXXXXXX 443
++ R ATP K Y FM+K+ EK+ +R R + D
Sbjct: 438 VESRNATPGKIYPFMSKDATEKMQQLRQSRALYRSLD-----AEFLQEQQQEKHQQYHHR 492
Query: 444 XYSAGPQTFYEQSCETTNEIVFGAVQEVD 472
+S P T YEQS E TNEIVFG QE D
Sbjct: 493 HHSTIPYTLYEQSSEKTNEIVFGPGQEQD 521
>AT5G14890.1 | chr5:4818056-4821534 FORWARD LENGTH=755
Length = 754
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 213/472 (45%), Positives = 283/472 (59%), Gaps = 51/472 (10%)
Query: 36 PAKVVTGLLSSTASAVVKQLWSLKXXXXXX---XXXXXXXXMVKYEGGYAVETVFDGSKL 92
P K+V+GL+++ AS + K LWSL+ MVKYE GY +ETVFDGSKL
Sbjct: 30 PVKIVSGLVTNVASILWKWLWSLQTSTTTTTTTKSGVSSRSMVKYESGYNMETVFDGSKL 89
Query: 93 GIEPHDVEVTPSG-ELLVLDSMNSNVYRVQLPLSRYSRPKLVAGSPEGLSGHVDGRLREA 151
GIEP+ +EV+P+G EL+VLDS NSN++++ +PLSRY +PKL++GS EG +GHVDG+L+EA
Sbjct: 90 GIEPYAIEVSPNGGELIVLDSENSNIHKISMPLSRYGKPKLLSGSQEGYTGHVDGKLKEA 149
Query: 152 KMNHPKGFTVDDRGNIYVADAMNMAIRKISDTGVTTIAGGKSMRGGHLDGPSDDAKFSTD 211
+MN P+G +DDRGNIYVAD +NMAIRKISD GV+TIA G GG + + +FS D
Sbjct: 150 RMNRPRGLAMDDRGNIYVADTINMAIRKISDDGVSTIAAGGRWSGGSKE---ESMRFSDD 206
Query: 212 FEIRYISSSCSLLVIDRGNQAIREIALHNDDCEYQYE---AGFPLGIALLFAAGFFGYML 268
F++ Y+SSSCSLLVIDRGNQ I+EI LH+ DC Q E LG ALL AA FFGYML
Sbjct: 207 FDLIYVSSSCSLLVIDRGNQLIKEIQLHDHDCS-QPEPDTDSLHLGTALLVAAVFFGYML 265
Query: 269 ALLQRQVLGMVSTADEPQTPPR----PSIASIPPYQKPLKPSLRPPLIPTEDQAGKHEAE 324
ALL R+V + S++ R PS+ ++ PYQ+ +P +R PLIP + ++ E E
Sbjct: 266 ALLVRRVRSLFSSSSHDTKSKRHVATPSM-TMAPYQRYPRP-VRQPLIPPQHES---EKE 320
Query: 325 EGFFTSIGKLIGGAKSSAVEIFSRKKRPT----HQYHHHLQQQRANPWPVQESYAIPHDE 380
EGF S+GKL+ SS E+ S + HQYHH QQ N WPVQES+AIP ++
Sbjct: 321 EGFLGSLGKLVVKTGSSVSEMMSGSRNVIPPNFHQYHH---QQEPNQWPVQESFAIPEED 377
Query: 381 TPPPLDMRAATPRKNYAFMTKEPEKVHHVRHGRPYFNGWDMXXXXXXXXXXXXXXXXXXX 440
PP L+ R+ T P+K PY +
Sbjct: 378 GPPALEPRSGT----------NPDK--------PY-----LRAQGTNQNRSYYQDYDQYQ 414
Query: 441 XXXXYSAGPQTFYEQSCETTNEIVFGAVQEVDTKRRMVEIKAVNYGDTFYEQ 492
+ +E + E NEIVFGAVQE D +R + IKAV++ + +Q
Sbjct: 415 NQQKRNVNDTASFEDNRE-KNEIVFGAVQEQDGRREAMVIKAVDFNEAINDQ 465
>AT3G14860.2 | chr3:4998591-5000894 REVERSE LENGTH=494
Length = 493
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 191/326 (58%), Gaps = 30/326 (9%)
Query: 74 MVKYEGGYAVETVFDGSKLGIEPHDVEVTPSGELLVLDSMNSNVYRVQLPLSRYSRPKLV 133
++++E GY VETV +G+ +G+ P+ + V+ GEL +D +NSN+ ++ PLS+YSR +LV
Sbjct: 70 VLQFENGYLVETVVEGNDIGVVPYKIRVSDDGELYAVDELNSNIMKITPPLSQYSRGRLV 129
Query: 134 AGSPEGLSGHVDGRLREAKMNHPKGFTVDDRGNIYVADAMNMAIRKISDTGVTTIAGGKS 193
AGS +G +GH DG+ EA+ NHP+G T+DD+GN+YVAD +N+AIRKI D+GVTTIAGGKS
Sbjct: 130 AGSFQGKTGHADGKPSEARFNHPRGVTMDDKGNVYVADTLNLAIRKIGDSGVTTIAGGKS 189
Query: 194 MRGGHLDGPSDDAKFSTDFEIRYISSSCSLLVIDRGNQAIREIALHNDDCEYQYEAGFPL 253
G+ DGPS+DAKFS DF++ Y+ +CSLLVIDRGN A+R+I+L +DC+YQ ++ L
Sbjct: 190 NIAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLSEEDCDYQDDSSISL 249
Query: 254 -GIALLFAAGFFGYMLALLQRQVLGMVSTADEPQTPPRPSIASIPPYQK--PLKPSLRPP 310
I L+ A GY +LQ+ + + + S Y++ P K L P
Sbjct: 250 TDILLVIGAVLIGYATCMLQQGFGNSFFS--------KTQVGSETSYEEEHPGKEKLSRP 301
Query: 311 LIPTEDQAGKHE----AEEGFFTSIGKLIGGAKSSAVEIFSRKKRPTHQYHHHLQQQRAN 366
+ HE EE + S G+L+ A+E + P Q N
Sbjct: 302 V---------HEKTITKEEPGWPSFGQLLTDLCKLALEFITSHLVPAR------FQTNPN 346
Query: 367 PWPVQESYAIPHDETPPPLDMRAATP 392
P+++ +P DE PP R P
Sbjct: 347 LRPLKDRLIMPEDEQEPPRVQRHTAP 372
>AT1G23890.2 | chr1:8438900-8440803 REVERSE LENGTH=401
Length = 400
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 75 VKYEGGYAVETVFDGSKLGIEPHDVEVTP-SGELLVLDSMNSNVYRVQLPLSRYSRPKLV 133
+ E GY V TV DG K G+ P+ + P S L+VLDS S Y PLS S
Sbjct: 23 IVLEEGYEVTTVVDGHKSGLNPYTIHALPGSSNLIVLDSSGSTFYTTSFPLSVDSVINRF 82
Query: 134 AGSPEGLSGHVDGRLREAKMNHPKGFTVDDRGNIYVADAMNMAIRKISDTG-VTTIAGGK 192
AG +G SGHVDG+ ++ + P+GF VD +GN+YVAD N AIRKIS +G VTTIAGG
Sbjct: 83 AG--DGSSGHVDGKAGNSRFSKPRGFAVDAKGNVYVADKSNKAIRKISSSGSVTTIAGGI 140
Query: 193 SMRGGHLDGPSDDAKFSTDFEIRYISSSCSLLVIDRGNQAIREIALHNDDC 243
S GH DGP+ +A FS+DFEI ++ C LLV D GN+ IR+I L +DC
Sbjct: 141 SKAFGHRDGPAQNATFSSDFEITFVPQRCCLLVSDHGNEMIRQINLKEEDC 191
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,878,138
Number of extensions: 427367
Number of successful extensions: 1889
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1866
Number of HSP's successfully gapped: 5
Length of query: 517
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 414
Effective length of database: 8,282,721
Effective search space: 3429046494
Effective search space used: 3429046494
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)