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Os06g0267600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0181) R2 : 0.7
β1 : 0.943 (0.0664) R2dD : 0.138 R2D : 0.0519
β2 : 1.1 (0.043) R2dC : 0.435 R2C : 0.4
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.611 (0.0387) R2dN8 : 0.22 R2N8 : 0.118
σ : 0.341
deviance : 53.01
__
_____
C
peak time of C : 0.0678
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
42.87 0.308 11.4 0.965 0.808 0.629 -0.0656 -0.725 0.661 22.6 66.35 56 -- --
44.17 0.31 11.4 0.918 0.826 0.567 -0.42 -- 0.656 22.7 68.98 66 -- --
42.88 0.305 11.4 0.969 0.807 0.633 -- -0.767 0.662 22.6 66 56 -- --
44.88 0.312 11.4 0.94 0.809 0.595 -- -- 0.654 22.6 66.78 54 -- --
70.55 0.393 11.4 0.969 -- 1.02 -- -0.783 0.69 -- 65 19 -- --
52.18 0.339 11.4 0.926 1.1 -- -0.44 -- 0.609 0.107 -- -- -- --
53.01 0.341 11.4 0.943 1.1 -- -- -- 0.611 0.0678 -- -- -- --
72.66 0.399 11.4 0.941 -- 1.02 -- -- 0.678 -- 63 6 -- --
68.12 0.384 11.5 -- 0.816 0.604 -- -- 0.553 22.6 67.47 55 -- --
129.66 0.532 11.4 0.978 -- -- -- -- 0.627 -- -- -- -- --
76.47 0.409 11.5 -- 1.12 -- -- -- 0.506 0.115 -- -- -- --
95.96 0.458 11.4 -- -- 1.03 -- -- 0.579 -- 63.86 8 -- --
154.89 0.581 11.4 -- -- -- -- -- 0.518 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.96 humidity 80 1440 > th dose independent rect. 11 1
2 40.05 humidity 80 1440 < th dose independent rect. 11 1
3 40.12 humidity 70 1440 > th dose dependent rect. 11 1
4 40.63 humidity 70 30 > th dose dependent sin 0 NA
7 41.00 humidity 80 30 > th dose independent sin 0 NA
12 41.20 humidity 80 30 < th dose independent sin 1 NA
16 41.26 humidity 80 270 > th dose independent rect. 1 15
25 41.37 humidity 80 10 < th dose independent rect. 24 18
27 41.38 humidity 80 270 > th dose independent rect. 1 18
32 41.41 humidity 80 30 < th dose independent rect. 9 9
33 41.42 humidity 80 10 < th dose independent rect. 22 20
38 41.46 humidity 80 90 < th dose independent rect. 1 16
40 41.47 humidity 70 10 > th dose dependent rect. 6 14
55 41.56 humidity 90 10 < th dose dependent rect. 20 22
57 41.59 humidity 70 1440 > th dose dependent rect. 9 5
66 41.67 humidity 80 10 < th dose independent rect. 6 12
70 41.69 humidity 80 90 < th dose independent rect. 6 11
78 41.74 radiation 30 90 < th dose dependent rect. 11 22
107 41.90 humidity 80 1440 < th dose independent rect. 9 5
111 41.95 humidity 80 10 > th dose independent rect. 6 14
134 42.08 humidity 80 1440 < th dose independent rect. 8 7
145 42.12 radiation 1 90 < th dose dependent rect. 5 14
161 42.23 humidity 80 10 < th dose independent rect. 20 22
170 42.25 humidity 70 270 > th dose dependent rect. 23 20
174 42.26 humidity 90 30 < th dose dependent sin 1 NA
192 42.35 humidity 70 270 > th dose dependent rect. 1 16
193 42.35 humidity 60 30 > th dose dependent rect. 21 23
211 42.41 humidity 80 1440 > th dose independent rect. 9 5
212 42.41 humidity 80 1440 > th dose independent rect. 8 7
215 42.42 humidity 80 720 > th dose independent rect. 11 3
222 42.43 humidity 90 10 < th dose dependent rect. 7 11
227 42.44 humidity 90 1440 < th dose dependent rect. 11 1
244 42.49 radiation 1 90 < th dose independent rect. 5 14
256 42.53 humidity 80 1440 < th dose independent rect. 6 9
257 42.53 radiation 20 90 < th dose dependent sin 0 NA
281 42.59 humidity 80 1440 > th dose independent rect. 6 9
305 42.64 radiation 10 90 > th dose independent sin 0 NA
331 42.67 humidity 60 90 > th dose dependent rect. 11 23
358 42.72 humidity 60 30 > th dose dependent rect. 2 18
408 42.80 humidity 90 10 < th dose dependent rect. 9 9
433 42.84 radiation 10 90 > th dose independent rect. 9 23
473 42.90 humidity 90 10 < th dose dependent rect. 2 16
478 42.90 radiation 20 90 < th dose dependent rect. 21 23
490 42.92 humidity 80 1440 < th dose independent sin 3 NA
511 42.96 humidity 80 1440 > th dose independent sin 2 NA
595 43.07 humidity 90 1440 < th dose dependent rect. 10 3
628 43.12 humidity 60 10 > th dose dependent rect. 13 23
674 43.19 radiation 1 270 > th dose independent rect. 17 22
684 43.20 humidity 90 1440 < th dose dependent rect. 2 12
693 43.22 radiation 1 270 < th dose independent sin 2 NA
698 43.22 humidity 50 1440 > th dose dependent rect. 2 12
734 43.27 humidity 70 90 > th dose dependent no NA NA
738 43.27 humidity 70 90 > th dose dependent rect. 17 23
748 43.28 humidity 60 30 > th dose dependent rect. 15 23
787 43.33 radiation 20 90 < th dose dependent no NA NA
848 43.39 humidity 70 90 > th dose dependent rect. 1 23
868 43.42 humidity 90 90 < th dose dependent rect. 7 8
975 43.52 humidity 90 10 < th dose dependent rect. 7 21
979 43.53 radiation 1 270 < th dose independent rect. 3 15