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Os06g0264800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.2 (0.0241) R2 : 0.367
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.825 (0.0508) R2dN8 : 0.473 R2N8 : 0.367
σ : 0.455
deviance : 94.84
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
58.57 0.36 14.2 -0.722 0.515 -0.242 0.468 -1.63 -0.946 7.53 0.1227 4478 -- --
58.56 0.356 14.2 -0.744 0.499 -0.362 0.531 -- -0.972 7.52 0.8567 19861 -- --
59.13 0.358 14.2 -0.716 0.509 -0.237 -- -1.59 -0.947 7.63 0.2062 4683 -- --
58.85 0.357 14.2 -0.658 0.51 -0.385 -- -- -0.952 7.79 0.8528 19999 -- --
73.24 0.399 14.2 -0.703 -- -0.225 -- -1.6 -0.938 -- 0.1093 4743 -- --
61.91 0.369 14.2 -0.852 0.511 -- 0.424 -- -0.925 7.6 -- -- -- --
62.4 0.37 14.2 -0.841 0.511 -- -- -- -0.925 7.7 -- -- -- --
72.71 0.397 14.2 -0.647 -- -0.416 -- -- -0.954 -- 0.789 20398 -- --
65.84 0.378 14.2 -- 0.505 -0.583 -- -- -0.964 7.89 0.7967 47520 -- --
76.46 0.409 14.2 -0.835 -- -- -- -- -0.918 -- -- -- -- --
81.05 0.421 14.2 -- 0.504 -- -- -- -0.832 7.82 -- -- -- --
79.44 0.415 14.2 -- -- -0.565 -- -- -0.951 -- 1.149 38934 -- --
94.84 0.455 14.2 -- -- -- -- -- -0.825 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.02 wind 3.0 43200 < th dose dependent rect. 4 3
6 55.60 precipitation 0.1 14400 > th dose dependent rect. 17 1
8 55.63 wind 9.0 14400 > th dose independent rect. 10 1
9 55.63 wind 3.0 43200 < th dose dependent rect. 1 6
11 55.67 wind 3.0 43200 < th dose independent rect. 5 1
12 55.67 wind 9.0 14400 < th dose independent rect. 10 1
13 55.69 wind 9.0 14400 < th dose independent rect. 8 3
14 55.69 wind 3.0 43200 < th dose dependent rect. 23 8
19 55.75 wind 3.0 43200 > th dose independent rect. 5 1
22 55.82 precipitation 0.1 14400 < th dose independent rect. 17 1
23 55.82 precipitation 0.1 14400 < th dose dependent rect. 17 1
27 55.86 wind 1.0 43200 > th dose dependent rect. 5 1
28 55.87 precipitation 0.1 14400 > th dose independent rect. 17 1
32 55.90 precipitation 0.1 4320 > th dose dependent rect. 24 14
37 55.93 precipitation 0.1 4320 > th dose dependent rect. 23 18
43 55.97 humidity 80.0 14400 > th dose dependent rect. 13 1
44 55.97 precipitation 0.1 14400 > th dose dependent rect. 19 1
58 56.03 precipitation 0.1 14400 < th dose independent rect. 19 1
59 56.03 precipitation 0.1 14400 < th dose dependent rect. 19 1
62 56.05 precipitation 0.1 14400 > th dose independent rect. 19 1
69 56.10 wind 3.0 43200 < th dose independent rect. 5 3
75 56.16 precipitation 0.1 4320 > th dose independent rect. 23 18
76 56.16 precipitation 0.1 14400 > th dose dependent rect. 13 3
77 56.17 precipitation 0.1 4320 < th dose independent rect. 23 18
78 56.17 precipitation 0.1 4320 < th dose dependent rect. 23 18
79 56.18 precipitation 0.1 4320 < th dose independent rect. 24 14
81 56.18 precipitation 0.1 4320 < th dose dependent rect. 24 14
90 56.22 precipitation 0.1 4320 > th dose independent rect. 24 14
110 56.26 precipitation 0.1 4320 > th dose dependent rect. 24 6
112 56.26 precipitation 0.1 4320 > th dose dependent rect. 24 10
115 56.27 wind 9.0 14400 > th dose dependent rect. 10 1
129 56.30 wind 3.0 43200 > th dose independent rect. 5 3
130 56.30 precipitation 0.1 4320 > th dose dependent sin 6 NA
134 56.31 wind 3.0 43200 < th dose independent rect. 7 1
135 56.31 precipitation 0.1 4320 > th dose independent rect. 3 2
156 56.33 precipitation 0.1 4320 < th dose independent rect. 3 2
160 56.33 precipitation 0.1 4320 < th dose dependent rect. 3 2
166 56.34 precipitation 0.1 14400 > th dose independent rect. 13 3
168 56.34 wind 9.0 43200 < th dose dependent rect. 1 1
174 56.35 precipitation 0.1 4320 > th dose dependent rect. 3 2
198 56.40 precipitation 0.1 14400 < th dose independent rect. 12 5
199 56.40 wind 3.0 43200 < th dose independent rect. 23 9
203 56.40 precipitation 0.1 14400 < th dose dependent rect. 12 5
218 56.43 wind 3.0 43200 < th dose independent rect. 1 7
224 56.43 precipitation 0.1 14400 > th dose dependent rect. 9 8
229 56.44 precipitation 0.1 4320 < th dose independent rect. 24 10
233 56.44 precipitation 0.1 4320 < th dose dependent rect. 24 10
244 56.46 precipitation 0.1 4320 < th dose independent rect. 24 6
245 56.46 precipitation 0.1 4320 < th dose independent rect. 24 8
249 56.46 precipitation 0.1 4320 < th dose dependent rect. 24 6
250 56.46 precipitation 0.1 4320 < th dose dependent rect. 24 8
252 56.46 wind 1.0 43200 > th dose dependent rect. 22 10
266 56.49 precipitation 0.1 4320 > th dose independent rect. 24 8
268 56.49 precipitation 0.1 4320 > th dose independent rect. 24 10
280 56.51 precipitation 0.1 4320 > th dose independent rect. 24 6
297 56.54 wind 3.0 43200 > th dose independent rect. 7 1
333 56.57 wind 3.0 43200 > th dose independent rect. 1 7
338 56.58 precipitation 0.1 4320 > th dose independent sin 5 NA
339 56.58 precipitation 0.1 4320 < th dose independent sin 5 NA
347 56.58 precipitation 0.1 4320 < th dose dependent sin 5 NA
359 56.59 precipitation 0.1 4320 > th dose independent rect. 3 7
360 56.59 precipitation 0.1 4320 < th dose independent rect. 3 7
367 56.59 precipitation 0.1 4320 < th dose dependent rect. 3 7
400 56.63 precipitation 0.1 14400 > th dose dependent rect. 7 10
435 56.69 humidity 80.0 14400 > th dose independent rect. 15 1
467 56.72 humidity 80.0 14400 > th dose independent rect. 13 3
516 56.76 precipitation 0.1 14400 < th dose independent rect. 9 8
522 56.76 precipitation 0.1 14400 < th dose dependent rect. 9 8
523 56.76 wind 1.0 43200 < th dose dependent rect. 1 12
543 56.79 wind 1.0 43200 < th dose independent rect. 1 12
552 56.80 wind 1.0 43200 > th dose independent rect. 1 11
585 56.83 wind 1.0 43200 < th dose dependent rect. 3 10
586 56.83 precipitation 0.1 4320 > th dose dependent rect. 19 22
609 56.85 precipitation 0.1 4320 > th dose dependent rect. 19 13
610 56.85 precipitation 0.1 4320 > th dose dependent rect. 19 15
677 56.92 precipitation 0.1 4320 > th dose dependent rect. 19 19
708 56.95 wind 1.0 43200 > th dose independent rect. 3 9
710 56.95 wind 1.0 43200 > th dose dependent rect. 1 1
757 57.00 wind 5.0 43200 < th dose dependent sin 8 NA
790 57.03 wind 1.0 43200 > th dose independent rect. 1 1
793 57.03 wind 1.0 43200 < th dose independent rect. 3 9
794 57.03 precipitation 0.1 14400 > th dose independent rect. 7 10
798 57.03 precipitation 0.1 14400 > th dose independent rect. 2 18
809 57.04 precipitation 0.1 14400 < th dose independent rect. 2 18
814 57.04 precipitation 0.1 14400 < th dose dependent rect. 2 18
815 57.05 humidity 80.0 43200 < th dose independent rect. 6 1
818 57.05 precipitation 0.1 14400 < th dose independent rect. 7 10
827 57.05 precipitation 0.1 14400 < th dose dependent rect. 7 10
840 57.06 wind 5.0 43200 < th dose dependent rect. 22 15
880 57.10 precipitation 0.1 14400 > th dose independent rect. 23 21
881 57.10 precipitation 0.1 14400 < th dose independent rect. 23 21
888 57.10 precipitation 0.1 14400 < th dose dependent rect. 23 21
938 57.15 wind 3.0 43200 < th dose independent sin 8 NA