Os06g0236300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0236300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.41 | 0.53 | 7.46 | -1.12 | 3.84 | 2.05 | 0.205 | -0.947 | -0.375 | 7.85 | 15 | 10 | -- | -- |
| 128.16 | 0.527 | 7.45 | -0.998 | 3.85 | 2.12 | 0.211 | -- | -0.345 | 7.83 | 14.4 | 9 | -- | -- |
| 127.52 | 0.526 | 7.46 | -1.11 | 3.84 | 2.08 | -- | -0.896 | -0.368 | 7.85 | 14.77 | 9 | -- | -- |
| 128.17 | 0.527 | 7.44 | -0.986 | 3.84 | 2.09 | -- | -- | -0.337 | 7.84 | 14.37 | 8 | -- | -- |
| 922.14 | 1.41 | 7.57 | -1.18 | -- | 1.98 | -- | -1.91 | -0.339 | -- | 3.741 | 3 | -- | -- |
| 169.67 | 0.611 | 7.38 | -0.582 | 3.81 | -- | 0.0958 | -- | -0.0429 | 8.43 | -- | -- | -- | -- |
| 169.69 | 0.61 | 7.38 | -0.579 | 3.81 | -- | -- | -- | -0.043 | 8.43 | -- | -- | -- | -- |
| 924.93 | 1.42 | 7.53 | -0.915 | -- | 1.95 | -- | -- | -0.266 | -- | 9.193 | 2 | -- | -- |
| 151.31 | 0.573 | 7.41 | -- | 3.81 | 1.6 | -- | -- | -0.17 | 7.99 | 13.63 | 3 | -- | -- |
| 979.87 | 1.46 | 7.48 | -0.56 | -- | -- | -- | -- | -0.0047 | -- | -- | -- | -- | -- |
| 178.54 | 0.625 | 7.36 | -- | 3.81 | -- | -- | -- | 0.0216 | 8.44 | -- | -- | -- | -- |
| 945.74 | 1.43 | 7.5 | -- | -- | 1.67 | -- | -- | -0.132 | -- | 8.754 | 2 | -- | -- |
| 988.14 | 1.47 | 7.46 | -- | -- | -- | -- | -- | 0.0574 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 3 | 120.20 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 22 |
| 19 | 123.54 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 29 | 124.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 44 | 125.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 55 | 126.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 59 | 127.02 | temperature | 25 | 10 | > th | dose independent | rect. | 4 | 18 |
| 60 | 127.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 68 | 127.41 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 71 | 127.71 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 73 | 127.77 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 79 | 128.01 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 80 | 128.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 82 | 128.21 | temperature | 25 | 10 | > th | dose independent | rect. | 23 | 23 |
| 86 | 128.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 118 | 129.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 123 | 130.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 125 | 130.27 | temperature | 25 | 10 | < th | dose dependent | sin | 23 | NA |
| 150 | 131.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 163 | 131.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 166 | 131.62 | temperature | 25 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 171 | 131.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 174 | 131.87 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 176 | 131.89 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 182 | 132.10 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 186 | 132.18 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 196 | 132.40 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 205 | 132.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 207 | 132.45 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 251 | 133.15 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 292 | 133.69 | temperature | 25 | 10 | > th | dose independent | rect. | 4 | 21 |
| 308 | 133.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 338 | 134.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 340 | 134.29 | temperature | 25 | 10 | > th | dose independent | rect. | 19 | 23 |
| 344 | 134.32 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 350 | 134.37 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 10 |
| 351 | 134.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 401 | 134.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 411 | 134.78 | temperature | 25 | 10 | < th | dose independent | rect. | 1 | 23 |
| 422 | 134.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 13 |
| 425 | 134.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 430 | 134.90 | temperature | 25 | 10 | > th | dose independent | no | NA | NA |
| 469 | 135.10 | temperature | 25 | 10 | > th | dose independent | rect. | 10 | 23 |
| 487 | 135.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 511 | 135.26 | temperature | 25 | 10 | < th | dose independent | rect. | 23 | 23 |
| 523 | 135.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 12 |
| 525 | 135.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 528 | 135.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 542 | 135.36 | temperature | 25 | 10 | < th | dose independent | rect. | 24 | 20 |
| 546 | 135.37 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 571 | 135.43 | temperature | 25 | 10 | < th | dose independent | rect. | 2 | 18 |
| 587 | 135.50 | temperature | 25 | 10 | < th | dose independent | rect. | 13 | 23 |
| 604 | 135.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 662 | 135.65 | temperature | 25 | 10 | < th | dose independent | rect. | 21 | 23 |
| 669 | 135.67 | temperature | 25 | 30 | < th | dose independent | rect. | 5 | 23 |
| 683 | 135.70 | temperature | 25 | 10 | < th | dose independent | no | NA | NA |
| 695 | 135.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 705 | 135.75 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 759 | 135.84 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 9 |
| 803 | 135.90 | temperature | 25 | 10 | < th | dose independent | rect. | 11 | 23 |
| 831 | 135.94 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 859 | 135.99 | temperature | 25 | 10 | < th | dose independent | rect. | 15 | 23 |
| 871 | 136.01 | temperature | 25 | 10 | < th | dose independent | rect. | 9 | 23 |
| 905 | 136.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 933 | 136.12 | temperature | 25 | 10 | < th | dose independent | rect. | 19 | 23 |