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Os06g0233800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10 (0.0403) R2 : 0.641
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.8 (0.103) R2dC : 0.607 R2C : 0.471
β3 : 1.77 (0.125) R2dE : 0.171 R2E : 0.0138
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.289 (0.0854) R2dN8 : 0.0116 R2N8 : -0.00629
σ : 0.752
deviance : 260.7
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_____
C
peak time of C : 8.61
E
wheather : humidity
threshold : 79
memory length : 926
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 7.33
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
252.83 0.747 10 0.196 2.75 1.58 1.4 2.01 0.295 8.49 79 921 7.09 --
258.09 0.748 10 0.0961 2.76 1.71 1.23 -- 0.323 8.49 79 923 7.2 --
258.7 0.749 10 0.231 2.78 1.66 -- 1.78 0.318 8.56 79.45 920 7.14 --
260.64 0.752 10 0.0931 2.79 1.77 -- -- 0.313 8.61 79 926 7.36 --
297.45 0.803 10.2 0.498 -- 3.63 -- 2.35 0.0455 -- 368.1 1335 9.3 --
345.86 0.872 10.1 0.204 2.62 -- 1.62 -- 0.102 7.64 -- -- -- --
353.09 0.88 10.1 0.247 2.62 -- -- -- 0.101 7.72 -- -- -- --
303.75 0.812 10.1 0.259 -- 3.63 -- -- 0.0649 -- 561.8 1376 9.63 --
260.7 0.752 10 -- 2.8 1.77 -- -- 0.289 8.61 79 926 7.33 --
722.26 1.26 10.1 0.28 -- -- -- -- 0.138 -- -- -- -- --
354.69 0.881 10.1 -- 2.62 -- -- -- 0.0731 7.72 -- -- -- --
305.67 0.814 10.2 -- -- 3.64 -- -- 0.0413 -- 595 1379 9.69 --
724.33 1.26 10.1 -- -- -- -- -- 0.107 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 250.25 temperature 10.0 270 > th dose dependent rect. 5 7
2 251.40 temperature 15.0 270 > th dose dependent rect. 6 5
4 253.07 humidity 90.0 720 < th dose dependent rect. 20 1
6 253.54 humidity 90.0 720 < th dose dependent rect. 18 5
23 256.52 humidity 50.0 720 > th dose dependent rect. 17 9
31 257.65 humidity 80.0 720 < th dose dependent rect. 18 14
32 257.89 radiation 1.0 90 < th dose dependent rect. 5 22
44 259.93 wind 5.0 270 < th dose dependent rect. 1 4
51 261.37 precipitation 0.1 270 < th dose independent rect. 1 15
52 261.37 precipitation 0.1 270 < th dose dependent rect. 1 15
55 261.67 wind 3.0 270 < th dose independent rect. 1 4
67 262.61 temperature 20.0 270 > th dose independent rect. 6 5
72 262.99 humidity 70.0 720 > th dose independent rect. 18 9
81 263.95 temperature 20.0 270 > th dose independent rect. 5 7
96 264.50 precipitation 0.1 270 < th dose independent rect. 13 16
97 264.50 precipitation 0.1 270 < th dose dependent rect. 13 16
102 264.77 temperature 30.0 720 > th dose dependent rect. 18 1
122 265.00 atmosphere 995.0 270 > th dose independent rect. 1 15
135 265.40 wind 3.0 10 < th dose dependent rect. 3 5
140 265.63 radiation 1.0 90 < th dose independent rect. 5 22
151 266.25 precipitation 0.1 90 < th dose independent rect. 3 15
152 266.25 precipitation 0.1 90 < th dose dependent rect. 3 15
155 266.30 temperature 20.0 270 > th dose independent rect. 6 18
157 266.52 humidity 80.0 720 < th dose independent rect. 20 1
158 266.56 humidity 50.0 90 > th dose dependent rect. 18 9
183 267.29 precipitation 0.1 270 < th dose independent rect. 11 19
184 267.29 precipitation 0.1 270 < th dose dependent rect. 11 19
192 267.46 radiation 1.0 90 < th dose dependent rect. 13 14
195 267.54 humidity 50.0 1440 < th dose independent rect. 16 1
199 267.61 humidity 50.0 1440 > th dose independent rect. 16 1
200 267.62 humidity 50.0 1440 < th dose dependent rect. 16 1
204 267.70 temperature 15.0 10 > th dose dependent rect. 7 7
210 267.88 radiation 1.0 90 < th dose dependent rect. 17 10
212 267.94 temperature 10.0 270 > th dose independent rect. 16 9
213 267.94 radiation 40.0 270 < th dose independent rect. 16 9
214 267.94 temperature 10.0 270 > th dose independent rect. 1 15
215 267.94 atmosphere 1015.0 270 < th dose independent rect. 1 15
218 268.12 wind 9.0 270 < th dose independent rect. 16 9
237 268.39 precipitation 0.1 270 < th dose independent rect. 1 4
238 268.39 precipitation 0.1 270 < th dose dependent rect. 1 4
280 268.92 radiation 40.0 270 < th dose dependent rect. 16 9
285 268.99 temperature 25.0 270 < th dose independent rect. 1 4
291 269.20 temperature 15.0 90 > th dose dependent rect. 3 4
313 269.91 radiation 1.0 90 < th dose independent rect. 17 10
317 270.06 temperature 25.0 720 > th dose dependent rect. 20 1
336 270.69 atmosphere 995.0 90 > th dose independent rect. 3 15
340 270.83 wind 9.0 270 < th dose independent rect. 1 15
362 271.43 wind 7.0 270 < th dose independent rect. 5 8
389 271.95 radiation 1.0 90 < th dose independent rect. 13 14
401 272.16 wind 9.0 270 < th dose independent rect. 5 20
402 272.18 humidity 50.0 270 > th dose independent rect. 5 7
414 272.32 humidity 60.0 90 > th dose independent rect. 18 9
420 272.40 atmosphere 995.0 270 > th dose independent rect. 5 7
421 272.40 atmosphere 1015.0 270 < th dose independent rect. 5 7
423 272.40 temperature 10.0 270 > th dose independent rect. 12 17
450 272.68 temperature 10.0 90 > th dose independent rect. 18 9
452 272.68 radiation 20.0 90 < th dose independent rect. 18 9
455 272.68 temperature 10.0 90 > th dose independent rect. 3 15
456 272.68 atmosphere 1015.0 90 < th dose independent rect. 3 15
461 272.72 atmosphere 995.0 90 > th dose independent rect. 18 9
467 272.83 precipitation 0.1 270 < th dose independent rect. 5 7
470 272.83 precipitation 0.1 270 < th dose dependent rect. 5 7
482 272.89 wind 9.0 90 < th dose independent rect. 18 9
515 273.29 wind 7.0 270 < th dose independent rect. 13 16
524 273.36 atmosphere 995.0 270 > th dose independent rect. 12 17
531 273.41 radiation 1.0 270 < th dose independent rect. 1 4
534 273.43 temperature 10.0 270 > th dose independent rect. 1 4
537 273.43 humidity 50.0 270 > th dose independent rect. 1 4
540 273.43 atmosphere 995.0 270 > th dose independent rect. 1 4
541 273.43 atmosphere 1010.0 270 < th dose independent rect. 1 4
546 273.43 temperature 10.0 270 > th dose independent rect. 5 20
547 273.43 radiation 20.0 270 < th dose dependent rect. 1 4
560 273.63 humidity 50.0 270 > th dose independent rect. 16 9
561 273.64 temperature 30.0 90 < th dose independent rect. 18 9
583 273.88 temperature 30.0 720 > th dose independent rect. 18 1
598 273.89 radiation 10.0 270 < th dose independent rect. 24 7
600 273.93 humidity 70.0 720 > th dose independent rect. 16 4
630 274.21 atmosphere 995.0 270 > th dose independent rect. 16 9
654 274.51 humidity 50.0 270 > th dose dependent rect. 1 4
664 274.63 atmosphere 1000.0 10 > th dose independent rect. 4 15
668 274.76 temperature 30.0 720 < th dose independent rect. 17 9
693 275.00 radiation 40.0 270 < th dose independent rect. 12 17
699 275.02 temperature 10.0 90 > th dose dependent rect. 7 20
702 275.05 precipitation 0.1 90 < th dose independent rect. 18 9
703 275.05 precipitation 0.1 90 < th dose dependent rect. 18 9
766 275.42 humidity 60.0 720 > th dose dependent rect. 18 1
768 275.43 atmosphere 995.0 270 > th dose independent rect. 6 5
769 275.43 atmosphere 1015.0 270 < th dose independent rect. 6 5
770 275.43 temperature 10.0 270 > th dose independent rect. 11 19
780 275.51 precipitation 0.1 270 < th dose independent rect. 6 5
781 275.51 precipitation 0.1 270 < th dose dependent rect. 6 5
820 275.89 precipitation 0.1 270 < th dose independent rect. 16 9
821 275.89 precipitation 0.1 270 < th dose dependent rect. 16 9
825 275.92 wind 9.0 270 < th dose dependent rect. 13 17
851 276.06 wind 9.0 90 < th dose independent rect. 3 15
852 276.06 humidity 50.0 10 > th dose dependent rect. 18 10
866 276.24 precipitation 0.1 10 < th dose independent rect. 3 5
867 276.24 precipitation 0.1 10 < th dose dependent rect. 3 5
942 276.91 humidity 90.0 720 < th dose dependent sin 13 NA
965 277.26 temperature 10.0 10 > th dose dependent rect. 8 19
988 277.33 wind 1.0 270 > th dose independent rect. 3 1