Os06g0217900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0217900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.5 | 0.356 | 9.32 | -1.24 | 0.946 | -0.971 | -0.0672 | -0.886 | -0.764 | 0.373 | 22.33 | 1500 | -- | -- |
| 59.42 | 0.359 | 9.35 | -1.55 | 0.949 | -0.963 | -0.0675 | -- | -0.826 | 0.347 | 22.31 | 1498 | -- | -- |
| 57.52 | 0.353 | 9.32 | -1.24 | 0.946 | -0.971 | -- | -0.883 | -0.764 | 0.37 | 22.34 | 1500 | -- | -- |
| 59.4 | 0.359 | 9.35 | -1.54 | 0.945 | -0.975 | -- | -- | -0.837 | 0.386 | 22.3 | 1500 | -- | -- |
| 96.01 | 0.456 | 9.37 | -1.83 | -- | -1.03 | -- | 0.797 | -0.973 | -- | 24.7 | 906 | -- | -- |
| 96.35 | 0.46 | 9.28 | -1.2 | 0.972 | -- | -0.0813 | -- | -0.503 | 0.494 | -- | -- | -- | -- |
| 96.38 | 0.46 | 9.28 | -1.2 | 0.973 | -- | -- | -- | -0.502 | 0.493 | -- | -- | -- | -- |
| 90.41 | 0.443 | 9.37 | -1.58 | -- | -1.25 | -- | -- | -0.965 | -- | 24.9 | 963 | -- | -- |
| 116.98 | 0.504 | 9.29 | -- | 0.914 | -0.638 | -- | -- | -0.568 | 0.338 | 22.3 | 1404 | -- | -- |
| 155.76 | 0.583 | 9.26 | -1.16 | -- | -- | -- | -- | -0.486 | -- | -- | -- | -- | -- |
| 134.21 | 0.542 | 9.25 | -- | 0.955 | -- | -- | -- | -0.369 | 0.43 | -- | -- | -- | -- |
| 151.45 | 0.573 | 9.3 | -- | -- | -0.992 | -- | -- | -0.68 | -- | 25.02 | 950 | -- | -- |
| 191.53 | 0.646 | 9.23 | -- | -- | -- | -- | -- | -0.357 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 59.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 12 | 59.75 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 37 | 60.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 18 |
| 43 | 60.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 59 | 60.31 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 71 | 60.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 17 |
| 85 | 60.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 15 |
| 92 | 60.45 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 151 | 60.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 162 | 60.70 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 179 | 60.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 226 | 60.88 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 307 | 61.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 604 | 62.58 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 719 | 62.98 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 850 | 63.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |