BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0217900 Os06g0217900|AK103765
(223 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65420.3 | chr5:26141592-26143750 REVERSE LENGTH=319 127 6e-30
AT2G22490.2 | chr2:9554157-9555873 REVERSE LENGTH=363 119 2e-27
AT5G10440.1 | chr5:3280611-3282342 REVERSE LENGTH=299 110 4e-25
AT3G50070.1 | chr3:18565322-18566669 REVERSE LENGTH=362 101 3e-22
AT1G70210.1 | chr1:26440015-26441980 FORWARD LENGTH=340 101 3e-22
AT5G67260.1 | chr5:26836313-26837665 FORWARD LENGTH=368 90 7e-19
AT4G34160.1 | chr4:16357903-16359304 FORWARD LENGTH=377 89 2e-18
AT4G03270.1 | chr4:1432375-1433691 REVERSE LENGTH=303 65 3e-11
AT4G37630.1 | chr4:17679497-17680788 FORWARD LENGTH=324 54 8e-08
AT5G02110.1 | chr5:417087-418553 FORWARD LENGTH=342 49 2e-06
>AT5G65420.3 | chr5:26141592-26143750 REVERSE LENGTH=319
Length = 318
Score = 127 bits (318), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 106/168 (63%), Gaps = 15/168 (8%)
Query: 29 KMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFND 88
K+EET VP +DLQV D ++VFE ++++RMEL VLN LKWR++A+T CS+I Y+L K +
Sbjct: 146 KIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSK 205
Query: 89 -DDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVALVALEEHETSMFER--VATCY 145
D PS + +SRS+ +I ST K +FL FRPSE+AA+VAL E + F+ + +
Sbjct: 206 CDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSFSPLF 265
Query: 146 KNLKKERVLRCYEMIQDKIIMRNIMRQSAGSVFSIPKSPIGVLDAAAC 193
L+KERV + EMI +S GS ++P GVL+ +AC
Sbjct: 266 SLLQKERVKKIGEMI-----------ESDGSDLC-SQTPNGVLEVSAC 301
>AT2G22490.2 | chr2:9554157-9555873 REVERSE LENGTH=363
Length = 362
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 112/186 (60%), Gaps = 12/186 (6%)
Query: 29 KMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFND 88
KMEET VPH +DLQV D K+VFE +TIKRMEL V+ L WR+QA+T SFIDY++ K +
Sbjct: 155 KMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISG 214
Query: 89 DDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVALVALEEHETSMFER---VATCY 145
S + + RS IL+T K EFL FRPSEIAA+ A+ ET + +++
Sbjct: 215 H--VSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLI 272
Query: 146 KNLKKERVLRCYEMIQDKIIMRNI------MRQSAGSVFSIPKSPIGVLDAAACISQQSE 199
++ERV RC +++ N+ Q+ +V ++P SP+GVL+ A C+S +SE
Sbjct: 273 YVKQQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAVPASPVGVLE-ATCLSYRSE 331
Query: 200 DTFVGS 205
+ V S
Sbjct: 332 ERTVES 337
>AT5G10440.1 | chr5:3280611-3282342 REVERSE LENGTH=299
Length = 298
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 91/136 (66%), Gaps = 7/136 (5%)
Query: 29 KMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFND 88
K+EET VP + LQV +VFE ++++RMEL VLN L+WR++AVT CS++ Y+L K N
Sbjct: 127 KIEETNVPELMQLQVGAPMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKING 186
Query: 89 -DDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVALVALEEHETSMFER--VATCY 145
D P + ++RS+ +I ST K +FL FR SEIAA+VAL EH F++ ++ +
Sbjct: 187 YDQEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAAVALSVSGEH----FDKFSFSSSF 242
Query: 146 KNLKKERVLRCYEMIQ 161
+L+KERV + EMI+
Sbjct: 243 SSLEKERVKKIGEMIE 258
>AT3G50070.1 | chr3:18565322-18566669 REVERSE LENGTH=362
Length = 361
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 15/188 (7%)
Query: 7 EFQQEEACMTQXXXXXXXXXXXKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNAL 66
+FQ ++ M+Q K+EE VP LD QV +A+YVFE +TI+RMEL VL+ L
Sbjct: 122 KFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTL 181
Query: 67 KWRMQAVTACSFIDYYLHKFNDDDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVA 126
WRM VT SF D+ + +++ LSR L+LS + FL F PS +A ++
Sbjct: 182 DWRMHPVTPISFFDHIIRRYSFKSHHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIM 241
Query: 127 LVALEEH---ETSMFERVATCYKNLKKERVLRCYEMIQD----KIIMRNIMRQSAGSVFS 179
+ + + + ++++ + E+V +CYE++ D K M N M+Q
Sbjct: 242 VSVIRDLKMCDEAVYQSQLMTLLKVDSEKVNKCYELVLDHSPSKKRMMNWMQQ------- 294
Query: 180 IPKSPIGV 187
P SPIGV
Sbjct: 295 -PASPIGV 301
>AT1G70210.1 | chr1:26440015-26441980 FORWARD LENGTH=340
Length = 339
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 81/145 (55%), Gaps = 5/145 (3%)
Query: 29 KMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFND 88
KMEE +VP D QV KY+FE +TIKRMEL VL+ L WR+++VT FI ++ +K +
Sbjct: 140 KMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDP 199
Query: 89 DDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVALVALEEHET-----SMFERVAT 143
T +S + ++ILS K A FL + PS IAA+ L E + + E T
Sbjct: 200 SGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANELPSLSSVVNPHESPET 259
Query: 144 CYKNLKKERVLRCYEMIQDKIIMRN 168
L KE+++RCY +++ I N
Sbjct: 260 WCDGLSKEKIVRCYRLMKAMAIENN 284
>AT5G67260.1 | chr5:26836313-26837665 FORWARD LENGTH=368
Length = 367
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 7 EFQQEEACMTQXXXXXXXXXXXKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNAL 66
+ Q ++ M+Q K+EE VP LDLQV +A+Y+FE +TI+RMEL +L+ L
Sbjct: 132 KLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTL 191
Query: 67 KWRMQAVTACSFIDYYLHKFNDDDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVA 126
+WRM VT SF D+ + +F + L++S F+ + PS +A ++
Sbjct: 192 QWRMHPVTPISFFDHIIRRFGSKWHQQLDFCRKCERLLISVIADTRFMRYFPSVLATAIM 251
Query: 127 LVALEE----HETSMFERVATCYKNLKKERVLRCYEMIQD----KIIMRNIMRQSAGSVF 178
++ EE E ++ T K + +E+V CYE++ + K M N++ Q
Sbjct: 252 ILVFEELKPCDEVEYQSQITTLLK-VNQEKVNECYELLLEHNPSKKRMMNLVDQD----- 305
Query: 179 SIPKSPIGVLD 189
SP GVLD
Sbjct: 306 ----SPSGVLD 312
>AT4G34160.1 | chr4:16357903-16359304 FORWARD LENGTH=377
Length = 376
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Query: 8 FQQEEACMTQXXXXXXXXXXXKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALK 67
Q+++ M Q K+EET VP LD QV + KYVFE +TI+RMEL +L+ L+
Sbjct: 124 LQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLE 183
Query: 68 WRMQAVTACSFIDYYLHKFNDDDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVAL 127
W+M +T SF+D+ + + + L++ L+LS + F+ + PS +AA+ +
Sbjct: 184 WKMHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLLSVISDSRFVGYLPSVVAAATMM 243
Query: 128 VALEE---HETSMFERVATCYKNLKKERVLRCYEMI 160
+E+ + ++ NL KE+V CY++I
Sbjct: 244 RIIEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLI 279
>AT4G03270.1 | chr4:1432375-1433691 REVERSE LENGTH=303
Length = 302
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 29/182 (15%)
Query: 50 FETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFN-DDDTP---STSALSRSVDLIL 105
F+ + I+RME +L ALKWRM++VT SF+ +++ F ++ P S S++ DL
Sbjct: 133 FDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLLKHSLKSQTSDLTF 192
Query: 106 STCKVAEFLVFRPSEIAASVALVALEEHETSMF----ERVATC-YKNLKKERVLRCYEMI 160
S FL F+PS IA + L A E F R+ C Y N K+ ++ CY+ I
Sbjct: 193 SLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRINQCTYVN--KDELMECYKAI 250
Query: 161 QDKIIMRNIMRQSAGSVFSIPKSPIGVLDA--AACISQQSEDTFVGSPATNYESSASSKR 218
Q++ I I+ ++ GS ++ + VLD ++C S +S +S+S KR
Sbjct: 251 QERDI---IVGENEGST----ETAVNVLDQQFSSCESDKS---------ITITASSSPKR 294
Query: 219 RR 220
R+
Sbjct: 295 RK 296
>AT4G37630.1 | chr4:17679497-17680788 FORWARD LENGTH=324
Length = 323
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 4 LHSEF---QQEEACMTQXXXXXXXXXXXKMEETVVPHPLDLQVCDAKYVFETRTIKRMEL 60
LH F Q++E + KMEE +VP L D +VF+ I++ EL
Sbjct: 104 LHKRFIGLQKDETWAMRLLSVACLSLAAKMEERIVPG-LSQYPQDHDFVFKPDVIRKTEL 162
Query: 61 AVLNALKWRMQAVTACSFIDYYLHKFNDDDTPSTS--ALSRSVDLILSTCKVAEFLVFRP 118
+L+ L W+M +T + +Y+L K + D+ + L RS D +L+ K F +R
Sbjct: 163 LILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTKEISFTEYRQ 222
Query: 119 SEIAA 123
+AA
Sbjct: 223 FVVAA 227
>AT5G02110.1 | chr5:417087-418553 FORWARD LENGTH=342
Length = 341
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 29 KMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFND 88
K E P +L++ ++F T+ +MEL +L AL+WR+ AVT+ +F + K
Sbjct: 136 KFNEVTTPLLEELEMEGLTHMFHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKIG- 194
Query: 89 DDTPSTSALSRSVDLILSTCKVAEFLVFRPSEIAASVALVALEEHETSMFERVATCYKNL 148
++R + +L + L + PS +A + + +E+ E + ++
Sbjct: 195 -MVGDHMIMNRITNHLLDVICDLKMLQYPPSVVATAAIWILMEDKVCR--ESIMNLFEQN 251
Query: 149 KKERVLRCYEMIQDKIIMRNIMRQSAGSVFSIPKSPIGVLDAAACISQQSE 199
KE++++C + +++ R+I QS+ +S +S + +L ++ +
Sbjct: 252 HKEKIVKCVDGMKN----RDIDHQSSRRRYSEGRSILSLLQRGDVMNMNGD 298
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.130 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,188,170
Number of extensions: 145812
Number of successful extensions: 415
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 406
Number of HSP's successfully gapped: 10
Length of query: 223
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 128
Effective length of database: 8,502,049
Effective search space: 1088262272
Effective search space used: 1088262272
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)